Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12d16r
         (624 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    43   7e-06
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    43   7e-06
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    43   7e-06
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    43   7e-06
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   1.5  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   1.5  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   2.6  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    24   3.4  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    24   4.5  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    24   4.5  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   7.9  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   7.9  

>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 43.2 bits (97), Expect = 7e-06
 Identities = 19/50 (38%), Positives = 29/50 (58%)
 Frame = -3

Query: 622 RFDGXLNVDLTEFQTNLVPYLRIHFPLVTYAPVIXAEKAYHEQLSVAEIT 473
           RF G LN DL +   N+VP+ R+HF +  +AP+       +  L+V E+T
Sbjct: 137 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 186


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 43.2 bits (97), Expect = 7e-06
 Identities = 19/50 (38%), Positives = 29/50 (58%)
 Frame = -3

Query: 622 RFDGXLNVDLTEFQTNLVPYLRIHFPLVTYAPVIXAEKAYHEQLSVAEIT 473
           RF G LN DL +   N+VP+ R+HF +  +AP+       +  L+V E+T
Sbjct: 137 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 186


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 43.2 bits (97), Expect = 7e-06
 Identities = 19/50 (38%), Positives = 29/50 (58%)
 Frame = -3

Query: 622 RFDGXLNVDLTEFQTNLVPYLRIHFPLVTYAPVIXAEKAYHEQLSVAEIT 473
           RF G LN DL +   N+VP+ R+HF +  +AP+       +  L+V E+T
Sbjct: 137 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 186


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 43.2 bits (97), Expect = 7e-06
 Identities = 19/50 (38%), Positives = 29/50 (58%)
 Frame = -3

Query: 622 RFDGXLNVDLTEFQTNLVPYLRIHFPLVTYAPVIXAEKAYHEQLSVAEIT 473
           RF G LN DL +   N+VP+ R+HF +  +AP+       +  L+V E+T
Sbjct: 137 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 186


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 15/39 (38%), Positives = 17/39 (43%)
 Frame = -1

Query: 495 SFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTS 379
           S PSP    H+S  PT     T  MA+      CT  TS
Sbjct: 11  SAPSPPHHHHSSQSPTS--TTTVTMATASPVPACTTTTS 47


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 15/39 (38%), Positives = 17/39 (43%)
 Frame = -1

Query: 495 SFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTS 379
           S PSP    H+S  PT     T  MA+      CT  TS
Sbjct: 11  SAPSPPHHHHSSQSPTS--TTTVTMATASPVPACTTTTS 47


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 64  RGQPGPHGLXRTLPPPYP 117
           RG+PGP G    L PP P
Sbjct: 627 RGEPGPKGEPGLLGPPGP 644


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = -3

Query: 268  TVVPGGDLAKVQRAVCMLSNTTAIAEAWAXLDHKFDLMYAKRAFV 134
            T +   D+AKV+ AV + +    ++   A +++ +DL  A  A +
Sbjct: 991  TALLENDIAKVKHAVVIQNGMNYLSNQLAFINNPYDLSIATYAMM 1035


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -1

Query: 108 RRESSXKXVRTWLPSRRITKKSAWTPLKARV 16
           R   S K V+ W  +RR+ +K    P  A +
Sbjct: 232 RLRLSEKQVKIWFQNRRVKRKKGDAPFGAEL 262


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +2

Query: 362 VHILGYDVTTVQHTASHV 415
           +H + Y ++TV HTAS++
Sbjct: 733 IHTIEYVLSTVSHTASYL 750


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 278 VVDTDLETGWTPXDELDSTLGFDGSDGRV 364
           +VD  + + W P  ELD   GF G +  V
Sbjct: 350 IVDFCVGSLWGPKSELDVARGFVGYNATV 378


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +2

Query: 62  LEGSQVLTXFXELSLLHTLTDVPVHESTLGVHEVELV 172
           L+  ++ T   EL   H +TD P H+ T      E V
Sbjct: 365 LDPEKLNTIIDELFPSHPVTDWPTHQPTTSQENPESV 401


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,289
Number of Sequences: 2352
Number of extensions: 15258
Number of successful extensions: 44
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)