Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12d11f
         (647 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    25   1.6  
AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding pr...    24   4.8  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   4.8  
AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    24   4.8  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   8.3  

>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = +2

Query: 392 EVGRTGRVQVEDIIFLVRKDARKYARVKDLLTMNEELKKARKAFDEVKYVEDQQ*PYC 565
           E+G TG VQ  D+   V    RK+  V ++   +E  +K R    EVK  +  Q P C
Sbjct: 28  ELGETGAVQFRDLNADVNAFQRKF--VSEVRRCDEMERKLRYVEGEVK-KDSVQIPEC 82


>AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding
           protein AgamOBP41 protein.
          Length = 279

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = -2

Query: 490 HCKKVFNTCILSCIFTN*ENYVFYLDSSCSTNFHCPMCCF 371
           HC+K F T  + CI  + E       S C   +H    CF
Sbjct: 225 HCEKEFKTHAVECITKHRE---LAYGSPCKRAYHLLYKCF 261


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 406 CSTNFHCPMCCFCYKFN 356
           CS N HC   C C +F+
Sbjct: 770 CSYNTHCFALCHCCEFD 786


>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 13/58 (22%), Positives = 25/58 (43%)
 Frame = +2

Query: 320 YTESVDFLEDLVIEFITETTHRAMEVGRTGRVQVEDIIFLVRKDARKYARVKDLLTMN 493
           Y   + F   + +       H  + VG+  RV +E+   +V      Y  +KD++ M+
Sbjct: 338 YNYPIAFRSSIRMMLRQSQRHAHITVGKFFRVNLEEFSRIVNLSYSAYVVLKDVIKMD 395


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 337 IDTFSIRVLIITKSIHHTS 281
           +DTFSI V +I  +IH  S
Sbjct: 312 LDTFSICVTVIVLNIHFRS 330


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 599,672
Number of Sequences: 2352
Number of extensions: 10686
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)