Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12d08f
         (572 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   1.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   1.8  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.5  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   9.9  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   9.9  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   9.9  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   9.9  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -3

Query: 216 MQDIFFSSQALHSSKINLLSVTVFFCAMMSSKLLE 112
           + D+ FS+ A ++S +     TVFFC    +KL+E
Sbjct: 77  LADLIFSASA-NASGV----ATVFFCLFYQNKLIE 106


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -2

Query: 364 FAVILYR*FNICETEIFVRFLAHINIGHLQVTIFTLSFTDTPS 236
           F  + Y+  +I     + RFLA     H+   I  +SFT  PS
Sbjct: 496 FRFLFYKPEDIFRPNTYNRFLAATGGDHVISLIDEISFTFPPS 538


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +2

Query: 161 SKLIFELCKACEL 199
           ++L+  LCK+C+L
Sbjct: 206 AELVMPLCKSCDL 218


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 351 FTGNSTFVKLKYLSGFLPISTL 286
           F+  STF K+ + S   PI+ L
Sbjct: 38  FSSVSTFFKIPFYSTLRPINLL 59


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 54  SWCC*IQENFVART 95
           SWC  +QE FV  +
Sbjct: 310 SWCYKLQEQFVTNS 323


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 351 FTGNSTFVKLKYLSGFLPISTL 286
           F+  STF K+ + S   PI+ L
Sbjct: 38  FSSVSTFFKIPFYSTLRPINLL 59


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 54  SWCC*IQENFVART 95
           SWC  +QE FV  +
Sbjct: 310 SWCYKLQEQFVTNS 323


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,681
Number of Sequences: 336
Number of extensions: 3085
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)