Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12d08f
         (572 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC051675-1|AAH51675.1|  515|Homo sapiens gap junction protein, a...    29   8.8  
AL139260-3|CAI23051.1|  515|Homo sapiens gap junction protein, a...    29   8.8  
AF271261-1|AAK55516.1|  515|Homo sapiens connexin 58 protein.          29   8.8  
AF179597-1|AAG09406.1|  515|Homo sapiens connexin 59 protein.          29   8.8  

>BC051675-1|AAH51675.1|  515|Homo sapiens gap junction protein,
           alpha 10, 59kDa protein.
          Length = 515

 Score = 29.5 bits (63), Expect = 8.8
 Identities = 14/43 (32%), Positives = 17/43 (39%)
 Frame = +2

Query: 362 KFMNSIWGKYNRYSPHNVKKVNDAFVSSGDFQQLPVNSSKNEP 490
           K    +WGKY     HN    N A  +   +Q    NS K  P
Sbjct: 237 KIKRGLWGKYKLKKEHNEFHANKAKQNVAKYQSTSANSLKRLP 279


>AL139260-3|CAI23051.1|  515|Homo sapiens gap junction protein,
           alpha 10, 59kDa protein.
          Length = 515

 Score = 29.5 bits (63), Expect = 8.8
 Identities = 14/43 (32%), Positives = 17/43 (39%)
 Frame = +2

Query: 362 KFMNSIWGKYNRYSPHNVKKVNDAFVSSGDFQQLPVNSSKNEP 490
           K    +WGKY     HN    N A  +   +Q    NS K  P
Sbjct: 237 KIKRGLWGKYKLKKEHNEFHANKAKQNVAKYQSTSANSLKRLP 279


>AF271261-1|AAK55516.1|  515|Homo sapiens connexin 58 protein.
          Length = 515

 Score = 29.5 bits (63), Expect = 8.8
 Identities = 14/43 (32%), Positives = 17/43 (39%)
 Frame = +2

Query: 362 KFMNSIWGKYNRYSPHNVKKVNDAFVSSGDFQQLPVNSSKNEP 490
           K    +WGKY     HN    N A  +   +Q    NS K  P
Sbjct: 237 KIKRGLWGKYKLKKEHNEFHANKAKQNVAKYQSTSANSLKRLP 279


>AF179597-1|AAG09406.1|  515|Homo sapiens connexin 59 protein.
          Length = 515

 Score = 29.5 bits (63), Expect = 8.8
 Identities = 14/43 (32%), Positives = 17/43 (39%)
 Frame = +2

Query: 362 KFMNSIWGKYNRYSPHNVKKVNDAFVSSGDFQQLPVNSSKNEP 490
           K    +WGKY     HN    N A  +   +Q    NS K  P
Sbjct: 237 KIKRGLWGKYKLKKEHNEFHANKAKQNVAKYQSTSANSLKRLP 279


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,552,873
Number of Sequences: 237096
Number of extensions: 1670611
Number of successful extensions: 3378
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3378
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)