Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12d07f
         (617 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    25   1.5  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    25   1.5  
AF458073-1|AAL68639.1|  166|Anopheles gambiae D7-related 5 prote...    23   6.0  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   7.9  

>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 529 GRAARLCRPRETSSAYYSCSCTL 597
           G A ++C P  T++ +  C C L
Sbjct: 177 GAACQVCTPNATNTVWSHCQCVL 199


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 529 GRAARLCRPRETSSAYYSCSCTL 597
           G A ++C P  T++ +  C C L
Sbjct: 177 GAACQVCTPNATNTVWSHCQCVL 199


>AF458073-1|AAL68639.1|  166|Anopheles gambiae D7-related 5 protein
           protein.
          Length = 166

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -2

Query: 553 VDIVELLFRSVWPEGWLLDGIKGQVRM 473
           V++ EL   S WPEG   D  K Q  M
Sbjct: 131 VELQELRVASKWPEGERFDRSKVQQMM 157


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +2

Query: 110 RVPAEQKAHLAAFKIKSDNYLRRVLANPPEPPK 208
           R+P +    L   K+   + + +V A PP PP+
Sbjct: 472 RLPVKSARQLEGLKLFLCDCVSKVRAAPPTPPE 504


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 700,749
Number of Sequences: 2352
Number of extensions: 15023
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)