Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12d06r
         (736 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           26   1.4  
U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          25   2.4  
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          25   2.4  
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          25   2.4  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +2

Query: 230 YTYFLKII*NDHKIILDKLLQNANYHTQTIK*LILQFIKLQ*YTGDI 370
           +T  L I+ N+  +   KLL N+  H   +K L L+F K+  ++  +
Sbjct: 90  HTAALSILCNEAIMARSKLLPNSFVHLARLKALSLEFCKIAKFSSTV 136


>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +1

Query: 646 NYEAVTSECNSIENQ-FRCPILFYQPFYLSL 735
           +YE    +  +I N+ FRCP   +QP +L +
Sbjct: 240 SYELPDGQVITIGNERFRCPEALFQPSFLGM 270


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +1

Query: 646 NYEAVTSECNSIENQ-FRCPILFYQPFYLSL 735
           +YE    +  +I N+ FRCP   +QP +L +
Sbjct: 240 SYELPDGQVITIGNERFRCPEALFQPSFLGM 270


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +1

Query: 646 NYEAVTSECNSIENQ-FRCPILFYQPFYLSL 735
           +YE    +  +I N+ FRCP   +QP +L +
Sbjct: 240 SYELPDGQVITIGNERFRCPEALFQPSFLGM 270


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,393
Number of Sequences: 2352
Number of extensions: 9368
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)