Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12d06r
         (736 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC067805-1|AAH67805.1|  306|Homo sapiens C1orf80 protein protein.      30   9.9  
BC043142-1|AAH43142.1|  141|Homo sapiens C1orf80 protein protein.      30   9.9  
BC015535-1|AAH15535.1|  306|Homo sapiens chromosome 1 open readi...    30   9.9  
AY227114-1|AAO37094.1|  256|Homo sapiens kinase/transmembrane do...    30   9.9  
AL592148-1|CAI40464.1|  306|Homo sapiens chromosome 1 open readi...    30   9.9  
AL392172-1|CAH73930.1|  306|Homo sapiens chromosome 1 open readi...    30   9.9  
AK022868-1|BAB14281.1|  306|Homo sapiens protein ( Homo sapiens ...    30   9.9  

>BC067805-1|AAH67805.1|  306|Homo sapiens C1orf80 protein protein.
          Length = 306

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = +1

Query: 79  ELMK--SKLKVMRKTYFKNRTHKEKKNFTSLKCF*DLKLDAV 198
           EL K   KL      +F+ + +K KK FTS KCF  +++D +
Sbjct: 225 ELQKHVEKLTKGAAIFFEFKHYKPKKRFTSTKCFAFMEMDEI 266


>BC043142-1|AAH43142.1|  141|Homo sapiens C1orf80 protein protein.
          Length = 141

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = +1

Query: 79  ELMK--SKLKVMRKTYFKNRTHKEKKNFTSLKCF*DLKLDAV 198
           EL K   KL      +F+ + +K KK FTS KCF  +++D +
Sbjct: 60  ELQKHVEKLTKGAAIFFEFKHYKPKKRFTSTKCFAFMEMDEI 101


>BC015535-1|AAH15535.1|  306|Homo sapiens chromosome 1 open reading
           frame 80 protein.
          Length = 306

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = +1

Query: 79  ELMK--SKLKVMRKTYFKNRTHKEKKNFTSLKCF*DLKLDAV 198
           EL K   KL      +F+ + +K KK FTS KCF  +++D +
Sbjct: 225 ELQKHVEKLTKGAAIFFEFKHYKPKKRFTSTKCFAFMEMDEI 266


>AY227114-1|AAO37094.1|  256|Homo sapiens kinase/transmembrane
           domain fusion protein protein.
          Length = 256

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = -3

Query: 458 IMILDFSMLIFSNVPLQITCLLELTSMNHECL 363
           +++   S++  S +PL I CLLE+T+   EC+
Sbjct: 201 MVLTQMSLVSSSTLPLIILCLLEMTTYYSECM 232


>AL592148-1|CAI40464.1|  306|Homo sapiens chromosome 1 open reading
           frame 80 protein.
          Length = 306

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = +1

Query: 79  ELMK--SKLKVMRKTYFKNRTHKEKKNFTSLKCF*DLKLDAV 198
           EL K   KL      +F+ + +K KK FTS KCF  +++D +
Sbjct: 225 ELQKHVEKLTKGAAIFFEFKHYKPKKRFTSTKCFAFMEMDEI 266


>AL392172-1|CAH73930.1|  306|Homo sapiens chromosome 1 open reading
           frame 80 protein.
          Length = 306

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = +1

Query: 79  ELMK--SKLKVMRKTYFKNRTHKEKKNFTSLKCF*DLKLDAV 198
           EL K   KL      +F+ + +K KK FTS KCF  +++D +
Sbjct: 225 ELQKHVEKLTKGAAIFFEFKHYKPKKRFTSTKCFAFMEMDEI 266


>AK022868-1|BAB14281.1|  306|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12806 fis, clone NT2RP2002235. ).
          Length = 306

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = +1

Query: 79  ELMK--SKLKVMRKTYFKNRTHKEKKNFTSLKCF*DLKLDAV 198
           EL K   KL      +F+ + +K KK FTS KCF  +++D +
Sbjct: 225 ELQKHVEKLTKGAAIFFEFKHYKPKKRFTSTKCFAFMEMDEI 266


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,511,125
Number of Sequences: 237096
Number of extensions: 1134468
Number of successful extensions: 1530
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1530
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)