Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12d06f
         (625 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ320163-1|CAC51488.1|  485|Drosophila melanogaster mod(mdg4)53....    34   0.14 
AE014297-2978|AAN13862.1|  485|Drosophila melanogaster CG32491-P...    34   0.14 

>AJ320163-1|CAC51488.1|  485|Drosophila melanogaster mod(mdg4)53.4
           protein protein.
          Length = 485

 Score = 34.3 bits (75), Expect = 0.14
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
 Frame = +2

Query: 434 GEHENAEILFEFYLRPSGRINLRLNNFTFYKHLKARSNAYRWSCTAYGSKWKCKAHL-VI 610
           G  E  E  FE+ +   G + L    F F +        Y W CT Y +K KC   L V+
Sbjct: 397 GNTEAQEKQFEYVVSQKGHVLLLHKKFPFIREKCINGKTY-WRCTQYTTKTKCHGRLHVL 455

Query: 611 TDKL 622
             K+
Sbjct: 456 NGKI 459


>AE014297-2978|AAN13862.1|  485|Drosophila melanogaster CG32491-PA,
           isoform A protein.
          Length = 485

 Score = 34.3 bits (75), Expect = 0.14
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
 Frame = +2

Query: 434 GEHENAEILFEFYLRPSGRINLRLNNFTFYKHLKARSNAYRWSCTAYGSKWKCKAHL-VI 610
           G  E  E  FE+ +   G + L    F F +        Y W CT Y +K KC   L V+
Sbjct: 397 GNTEAQEKQFEYVVSQKGHVLLLHKKFPFIREKCINGKTY-WRCTQYTTKTKCHGRLHVL 455

Query: 611 TDKL 622
             K+
Sbjct: 456 NGKI 459


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,937,976
Number of Sequences: 53049
Number of extensions: 535459
Number of successful extensions: 1300
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1300
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)