Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12d05r
         (699 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    27   0.75 
AY146740-1|AAO12100.1|  139|Anopheles gambiae odorant-binding pr...    23   7.0  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   9.2  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   9.2  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 26.6 bits (56), Expect = 0.75
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -3

Query: 259  IPFTIQTKSIKVENLPVIDXAYPTW*KNNI*KDKQV 152
            I FT+ +  I +E+LPV+D   P W      KD +V
Sbjct: 1756 IEFTLPSPKIGIESLPVVD---PPWMPRQQNKDMEV 1788


>AY146740-1|AAO12100.1|  139|Anopheles gambiae odorant-binding
           protein AgamOBP9 protein.
          Length = 139

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 60  CCINKIDYLLDTQMYVVENIIIKL 131
           C  NK+    DT   +V+N++++L
Sbjct: 65  CIFNKMQLFDDTNGPIVDNLVVQL 88


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 468 ITKPTTWVTSTSW 430
           I +P TWV STS+
Sbjct: 194 IARPDTWVVSTSY 206


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 288 TDLADCASTTYPSLSKQNRSKSKTYR 211
           T++A C S    +  K NR+KS   R
Sbjct: 276 TEIAQCRSHCIEARRKMNRAKSSEQR 301


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,920
Number of Sequences: 2352
Number of extensions: 14479
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)