Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12d05r
(699 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75544-4|CAA99880.1| 307|Caenorhabditis elegans Hypothetical pr... 71 8e-13
U39995-3|AAF99995.2| 572|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U49830-12|AAL16311.1| 363|Caenorhabditis elegans Hypothetical p... 30 1.8
AL032657-7|CAA21740.1| 340|Caenorhabditis elegans Hypothetical ... 29 3.2
Z92827-5|CAB07325.1| 732|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81139-6|CAH60791.2| 358|Caenorhabditis elegans Hypothetical pr... 28 7.4
L14331-7|AAN65310.1| 510|Caenorhabditis elegans Hypothetical pr... 28 7.4
L14331-6|AAN65311.1| 473|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical p... 27 9.8
Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical p... 27 9.8
Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical p... 27 9.8
Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical p... 27 9.8
Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical pr... 27 9.8
AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical ... 27 9.8
AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical ... 27 9.8
AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor prote... 27 9.8
>Z75544-4|CAA99880.1| 307|Caenorhabditis elegans Hypothetical
protein K02A11.3 protein.
Length = 307
Score = 70.9 bits (166), Expect = 8e-13
Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 7/149 (4%)
Frame = -3
Query: 613 KIWFTKYARHWTGLCKCSCAFENVFMAELKSNEVLGLHSWLFFAKRELDHKANYLGYIDK 434
++WF+ Y+R G S FE+VF+ E K+ E+ G+H+W+ F E + N+
Sbjct: 155 QLWFSHYSRA-LGRPDTS-GFEHVFIGEAKNGEISGMHNWVRFYVLENNRTENF------ 206
Query: 433 LDLSGKGLILKQHSVLSETKDAPEV------NMFVGTSPELETALYTLCFMTRPDR-PCR 275
KG +K+ ++++ K + ++ +GTSPE + ALYT+CF++R R C
Sbjct: 207 ---DYKGFTVKRFNIMAALKFTWDGLLKRAGSILIGTSPEFDMALYTMCFLSRRGRETCD 263
Query: 274 LRFNNIPFTIQTKSIKVENLPVIDXAYPT 188
+ F+ P I + I +N I YPT
Sbjct: 264 VEFDGCPLQITSFEIMQQNKVYIGSIYPT 292
>U39995-3|AAF99995.2| 572|Caenorhabditis elegans Hypothetical
protein M60.2 protein.
Length = 572
Score = 52.4 bits (120), Expect = 3e-07
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 1/130 (0%)
Frame = -3
Query: 631 KVELLRKIWFTKYARHWTGLCKCSCAFENVFMAELKSNEVLGLHSWLFFAKRELDHKANY 452
K ++L +WF Y R L S +E+VF E+KSNEV G H W+ + + K Y
Sbjct: 429 KTKVLWPLWFGTYTRCKGPLG--SSGWEHVFSGEIKSNEVDGQHDWVRYYTEQKADKMVY 486
Query: 451 LGYIDKLDLSGKGLILKQHSVLSETKDAPEVNMFVGTSPELETALYTLCFMTRPD-RPCR 275
GY + K + L P+ F GTSP + ++ ++C + + C
Sbjct: 487 DGYYTHDENLIGTFQYKWNGALK-----PKGGFFTGTSPAFDFSILSVCALAHGNGGNCH 541
Query: 274 LRFNNIPFTI 245
+ N P T+
Sbjct: 542 FKVTNYPITV 551
Score = 51.6 bits (118), Expect = 5e-07
Identities = 39/139 (28%), Positives = 62/139 (44%)
Frame = -3
Query: 619 LRKIWFTKYARHWTGLCKCSCAFENVFMAELKSNEVLGLHSWLFFAKRELDHKANYLGYI 440
L +WF YAR+ SC F++VF+ E V +W+ F +E K NY G+
Sbjct: 149 LYNLWFLPYARNQA---LGSCGFKSVFVGEATGTVVNRFANWVGFYIQENAGKFNYHGWF 205
Query: 439 DKLDLSGKGLILKQHSVLSETKDAPEVNMFVGTSPELETALYTLCFMTRPDRPCRLRFNN 260
KL+ G+ + V +D E + + +SP E A YT+ +T ++
Sbjct: 206 TKLN----GIAIDLQFVAGSDEDL-ETSFLLNSSPTFEFAAYTVAALTNTQPSILIQGEE 260
Query: 259 IPFTIQTKSIKVENLPVID 203
I IQ ++ V V+D
Sbjct: 261 I--DIQAPTLSVNKATVLD 277
>U49830-12|AAL16311.1| 363|Caenorhabditis elegans Hypothetical
protein C33F10.13 protein.
Length = 363
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -1
Query: 258 YPSLSKQNRSKSKTYRSLTPLTQLGKKIIFKKTN 157
+P L +RS KT R +TPL I KKTN
Sbjct: 7 FPILQLPSRSLQKTLRIMTPLNLFTLSFISKKTN 40
>AL032657-7|CAA21740.1| 340|Caenorhabditis elegans Hypothetical
protein Y47H9C.7 protein.
Length = 340
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -3
Query: 316 YTLC--FMTRPDRPCRLRFNNIPFTIQTKS 233
Y LC FMT PD R N++PF + KS
Sbjct: 261 YKLCPFFMTNPDSLHTFRSNSLPFDLSAKS 290
>Z92827-5|CAB07325.1| 732|Caenorhabditis elegans Hypothetical
protein C29F7.6 protein.
Length = 732
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -1
Query: 291 RTDLADCASTTYPSLSKQNRS-KSKTYRSLTPLTQLGK-KIIFKKTNKSSLKGRTIVLLL 118
R L + S S SK R KSK +LTP+ + + KII +K K+ L T+ + L
Sbjct: 159 RQILKNLVSAVENSKSKNTRGRKSKIQSNLTPINEKSECKIIKRKNEKTPLLLLTVPMFL 218
>Z81139-6|CAH60791.2| 358|Caenorhabditis elegans Hypothetical
protein W05H5.8 protein.
Length = 358
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -1
Query: 195 TQLGKKIIFKKTNKSSLKGRTIVLLLYFLQHTFVY 91
T + + I K N SSLKG ++LL FLQ ++Y
Sbjct: 103 TNIWTEDIAKMLNVSSLKGLELMLLSGFLQWYYMY 137
>L14331-7|AAN65310.1| 510|Caenorhabditis elegans Hypothetical
protein K12H4.7a protein.
Length = 510
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 204 SMTGKFSTLIDFVWIVKGMLLKRSLQGLSGRVMKQSVYRAVSSSGEV 344
+MT KF L + W+ G +L + + VY AV SSG V
Sbjct: 168 AMTAKFPQLANAKWVTFGGSYSGALAAWTRAKHPELVYAAVGSSGPV 214
>L14331-6|AAN65311.1| 473|Caenorhabditis elegans Hypothetical
protein K12H4.7b protein.
Length = 473
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 204 SMTGKFSTLIDFVWIVKGMLLKRSLQGLSGRVMKQSVYRAVSSSGEV 344
+MT KF L + W+ G +L + + VY AV SSG V
Sbjct: 168 AMTAKFPQLANAKWVTFGGSYSGALAAWTRAKHPELVYAAVGSSGPV 214
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.5 bits (58), Expect = 9.8
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = -1
Query: 405 SSSTRC*AKRKTRPK*TCLLAPPPNWRPLCTRSVS*PARTDLADCASTTYPSLSKQNRSK 226
S S A+R+ P + +PPP + +RS S PAR + AS + P ++ RS
Sbjct: 338 SKSPPAPARRRRSP--SASKSPPPAPKRAKSRSKSPPARRRRSPSASKS-PPAPRRRRSP 394
Query: 225 SKTYRSLTPLTQL 187
SK+ RS P ++
Sbjct: 395 SKS-RSPAPKREI 406
>Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 270 ASTTYPSLSKQNRSKSKTYRSLTPLTQLGKKIIFKKTNKSSL 145
+S+TY S+S NR S+ + P TQL + K S L
Sbjct: 235 SSSTYSSISNLNRPTSQLQKPSRPQTQLVRVATTTKIGSSKL 276
>Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 270 ASTTYPSLSKQNRSKSKTYRSLTPLTQLGKKIIFKKTNKSSL 145
+S+TY S+S NR S+ + P TQL + K S L
Sbjct: 235 SSSTYSSISNLNRPTSQLQKPSRPQTQLVRVATTTKIGSSKL 276
>Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 270 ASTTYPSLSKQNRSKSKTYRSLTPLTQLGKKIIFKKTNKSSL 145
+S+TY S+S NR S+ + P TQL + K S L
Sbjct: 101 SSSTYSSISNLNRPTSQLQKPSRPQTQLVRVATTTKIGSSKL 142
>Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 270 ASTTYPSLSKQNRSKSKTYRSLTPLTQLGKKIIFKKTNKSSL 145
+S+TY S+S NR S+ + P TQL + K S L
Sbjct: 235 SSSTYSSISNLNRPTSQLQKPSRPQTQLVRVATTTKIGSSKL 276
>Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 270 ASTTYPSLSKQNRSKSKTYRSLTPLTQLGKKIIFKKTNKSSL 145
+S+TY S+S NR S+ + P TQL + K S L
Sbjct: 235 SSSTYSSISNLNRPTSQLQKPSRPQTQLVRVATTTKIGSSKL 276
>Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 270 ASTTYPSLSKQNRSKSKTYRSLTPLTQLGKKIIFKKTNKSSL 145
+S+TY S+S NR S+ + P TQL + K S L
Sbjct: 235 SSSTYSSISNLNRPTSQLQKPSRPQTQLVRVATTTKIGSSKL 276
>Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 270 ASTTYPSLSKQNRSKSKTYRSLTPLTQLGKKIIFKKTNKSSL 145
+S+TY S+S NR S+ + P TQL + K S L
Sbjct: 101 SSSTYSSISNLNRPTSQLQKPSRPQTQLVRVATTTKIGSSKL 142
>Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 270 ASTTYPSLSKQNRSKSKTYRSLTPLTQLGKKIIFKKTNKSSL 145
+S+TY S+S NR S+ + P TQL + K S L
Sbjct: 235 SSSTYSSISNLNRPTSQLQKPSRPQTQLVRVATTTKIGSSKL 276
>AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical
protein T19A6.2b protein.
Length = 592
Score = 27.5 bits (58), Expect = 9.8
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = -1
Query: 285 DLADCASTTYPSLSKQNRSKSKTYRSLTPLTQL---GKKIIFKKTNKSSLKGRTIV 127
DL+D A K + S SKT +S T + + GK+ KK NK+ L G+TIV
Sbjct: 500 DLSD-ADDVADDDEKPSSSDSKTKKSKTDVASVRTRGKRG-GKKANKAKLSGKTIV 553
>AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical
protein T19A6.2a protein.
Length = 651
Score = 27.5 bits (58), Expect = 9.8
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = -1
Query: 285 DLADCASTTYPSLSKQNRSKSKTYRSLTPLTQL---GKKIIFKKTNKSSLKGRTIV 127
DL+D A K + S SKT +S T + + GK+ KK NK+ L G+TIV
Sbjct: 559 DLSD-ADDVADDDEKPSSSDSKTKKSKTDVASVRTRGKRG-GKKANKAKLSGKTIV 612
>AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor protein
UNC-53 protein.
Length = 1583
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 270 ASTTYPSLSKQNRSKSKTYRSLTPLTQLGKKIIFKKTNKSSL 145
+S+TY S+S NR S+ + P TQL + K S L
Sbjct: 235 SSSTYSSISNLNRPTSQLQKPSRPQTQLVRVATTTKIGSSKL 276
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,423,791
Number of Sequences: 27780
Number of extensions: 327414
Number of successful extensions: 852
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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