Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12d02r
(783 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 66 7e-12
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 59 8e-10
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 55 1e-08
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 52 7e-08
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 49 9e-07
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 45 1e-05
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 42 8e-05
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 40 3e-04
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 40 3e-04
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 40 5e-04
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 38 0.001
SPBC646.12c |gap1|src1, sar1|GTPase activating protein Gap1|Schi... 26 5.3
SPBC26H8.13c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 7.0
SPAC1039.02 |||phosphoprotein phosphatase |Schizosaccharomyces p... 25 9.3
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 65.7 bits (153), Expect = 7e-12
Identities = 25/69 (36%), Positives = 42/69 (60%)
Frame = -1
Query: 756 ALXLQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLL 577
A L+ H+ THT +PF C C+++FA + + R H Q H+ +K ++C C + F+RM L
Sbjct: 584 AYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDAL 643
Query: 576 SKHLEGGCG 550
++H + G
Sbjct: 644 NRHYKSEVG 652
Score = 39.9 bits (89), Expect = 4e-04
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = -1
Query: 693 CRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKHLEGGCGV 547
C + F NL++H+ TH++ + + CS C K+F+R +H + G+
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGI 625
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 58.8 bits (136), Expect = 8e-10
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHH--CRRAFADRSNLRAHLQTHSDVKKYSC--SGCGKTFSRMSL 580
L+ H+RTH+ E+PF C + C +AF +S+L+ H + H++VK +SC GC F
Sbjct: 40 LEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQH 99
Query: 579 LSKHLE 562
L +H+E
Sbjct: 100 LERHIE 105
Score = 53.2 bits (122), Expect = 4e-08
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHH--CRRAFADRSNLRAHLQTHSDVKKYSCS--GCGKTFSRMSL 580
L+ H R HT KPFSCH+ C F + +L H++ H K Y+C+ GC + FS+
Sbjct: 70 LKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQ 129
Query: 579 LSKHL 565
L H+
Sbjct: 130 LRSHI 134
Score = 41.1 bits (92), Expect = 2e-04
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTH----SDVKKYSC--SGCGKTFSRM 586
LQ HIR P SC C R F ++LR H+ H + K Y C GC K+F+R
Sbjct: 194 LQNHIRE--AHVP-SCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRS 250
Query: 585 SLLSKHL 565
S L KH+
Sbjct: 251 SALKKHI 257
Score = 39.5 bits (88), Expect = 5e-04
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Frame = -1
Query: 738 HIRTHTGEKPFSC--HHCRRAFADRSNLRAHLQT-HSDVKKYSCSGCGKTFSRMSLLSKH 568
H T K + C C+++F S L+ H+ H + C CG F +L +H
Sbjct: 226 HQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRH 285
Query: 567 LEGGCGVPGSTPY 529
LE G PY
Sbjct: 286 LERGTCKKAHKPY 298
Score = 37.5 bits (83), Expect = 0.002
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = -1
Query: 723 TGEKPFSCHH--CRRAFADRSNLRAHLQTHSDVKKYSC--SGCGKTFSRMSLLSKH 568
+ +K F C + C + ++ S L HL+THS+ + + C +GC K F R S L H
Sbjct: 18 SAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIH 73
Score = 26.6 bits (56), Expect = 4.0
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 8/53 (15%)
Frame = -1
Query: 609 CGKTFSRMSLLSKHLEGG-------CGVPGSTPYEYRPEAMQV-AHAHPNLPP 475
CGK +SR SLL +HL C G + YR +++ H N+ P
Sbjct: 30 CGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKP 82
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 54.8 bits (126), Expect = 1e-08
Identities = 22/69 (31%), Positives = 39/69 (56%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
++ HI+TH ++P+ C C+ F +L+ HL+ H + + Y C C K F+R+ L++H
Sbjct: 460 VESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKRFNRLDALNRH 518
Query: 567 LEGGCGVPG 541
+ V G
Sbjct: 519 KQRNICVGG 527
Score = 35.9 bits (79), Expect = 0.007
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -1
Query: 693 CRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKHL 565
C + A + N+ +H+QTH + Y C C F R L +HL
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHL 492
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 52.4 bits (120), Expect = 7e-08
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Frame = -1
Query: 765 AFXALXLQGHIRTHT-GEKPFSCHH--CRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTF 595
+F L+ R H G+ F C + C ++F + +LR H +TH +VK +SCS C + F
Sbjct: 6 SFTEKPLKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAF 65
Query: 594 SRMSLLSKHLE 562
+R +L++H++
Sbjct: 66 ARSDVLNRHVQ 76
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 48.8 bits (111), Expect = 9e-07
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Frame = -1
Query: 714 KPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCS-------GCGKTFSRMSLLSKH 568
K + C C RAFA +L+ H+++H++ K ++CS GCG+ FSR LL +H
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRH 123
Score = 33.5 bits (73), Expect = 0.035
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 7/41 (17%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHH-------CRRAFADRSNLRAHLQ 646
L+ HIR+HT EKPF+C C R F+ R L H Q
Sbjct: 85 LKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQ 125
Score = 27.5 bits (58), Expect = 2.3
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -1
Query: 633 VKKYSCSGCGKTFSRMSLLSKHL 565
VK+Y C C + F+R+ L +H+
Sbjct: 67 VKQYVCETCTRAFARLEHLKRHI 89
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 44.8 bits (101), Expect = 1e-05
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Frame = -1
Query: 738 HIRTHTGEKPFSCHH--CRRAFADRSNLRAHLQTH 640
HIR+HTGEKPF C + C++ F R L H++TH
Sbjct: 22 HIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 37.9 bits (84), Expect = 0.002
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -1
Query: 714 KPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCS--GCGKTFSRMSLLSKHL 565
K + C C+R F + + H+++H+ K + CS C K F+R L +H+
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHV 53
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 42.3 bits (95), Expect = 8e-05
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = -1
Query: 714 KPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCS--GCGKTFSRMSLLSKH 568
+P+ C C +AF + H++TH+ K + C+ GC K FSR L++H
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRH 74
Score = 36.3 bits (80), Expect = 0.005
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -1
Query: 738 HIRTHTGEKPFSCHH--CRRAFADRSNLRAHLQTHSD 634
HIRTHTGEKP C C + F+ L H + H++
Sbjct: 44 HIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTN 80
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 40.3 bits (90), Expect = 3e-04
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -1
Query: 720 GEKPFSCHHCRRAFADRSNLRAHLQT-HSDVKKYSCSGCGKTFSRMSLLSKH 568
G K F C C + F +LR H+++ H+ K + C CGK FSR L +H
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQH 469
Score = 37.9 bits (84), Expect = 0.002
Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -1
Query: 747 LQGHIRT-HTGEKPFSCHHCRRAFADRSNLRAHLQTH 640
L+ HIR+ HT EKPF C C + F+ R NLR H + H
Sbjct: 438 LRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLH 473
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 40.3 bits (90), Expect = 3e-04
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHH--CRRAFADRSNLRAHLQTH 640
L+ H +HTGE+PF C + C +AF RSN+R H + H
Sbjct: 483 LKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 39.5 bits (88), Expect = 5e-04
Identities = 12/43 (27%), Positives = 27/43 (62%)
Frame = -1
Query: 693 CRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKHL 565
C ++F + + R H ++H++ K + C C +F+R +L++H+
Sbjct: 24 CTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
Score = 32.7 bits (71), Expect = 0.061
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -1
Query: 738 HIRTHTGEKPFSCHHCRRAFADRSNLRAHL-QTH 640
H R+HT K F C HC +F L H+ Q H
Sbjct: 37 HFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKH 70
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 38.3 bits (85), Expect = 0.001
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCH--HCRRAFADRSNLRAHLQT 643
L H+R+HTGEKPF C C R+F L H++T
Sbjct: 93 LVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRT 129
Score = 32.3 bits (70), Expect = 0.081
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = -1
Query: 672 RSNLRAHLQTHSDVKKYSCS--GCGKTFSRMSLLSKHL 565
R L AHL++H+ K + CS C ++F+R L+KH+
Sbjct: 90 RFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHM 127
>SPBC646.12c |gap1|src1, sar1|GTPase activating protein
Gap1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 766
Score = 26.2 bits (55), Expect = 5.3
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 274 ITIEIYTVILTHFKILQSNLDTHTYP*KYEHFVLIHYGEPITCV 405
+ + + + LTH +I+ NLD P + H +L GEP V
Sbjct: 435 LEMTVNEIYLTH-EIILENLDNLYDPDSHVHLILQELGEPCKSV 477
>SPBC26H8.13c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 124
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -1
Query: 705 SCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGC 607
+CH C R ++N+R + T KK++C+ C
Sbjct: 59 TCHVCHR----KNNMRLKVGTCESCKKHTCAIC 87
>SPAC1039.02 |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 25.4 bits (53), Expect = 9.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 531 YEYRPEAMQVAHAHPNLPPPAT 466
Y RP + ++PNLP PAT
Sbjct: 311 YVGRPVTNETRQSYPNLPKPAT 332
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,013,672
Number of Sequences: 5004
Number of extensions: 61896
Number of successful extensions: 189
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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