Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12d02r
(783 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 53 2e-07
09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361 46 3e-05
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 46 4e-05
08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413 45 6e-05
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 44 2e-04
05_05_0022 + 21592403-21593083,21593720-21594208 43 3e-04
02_04_0316 - 21978330-21979397 42 6e-04
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108... 41 0.001
06_03_0743 + 24069752-24070483,24071890-24072345 40 0.002
03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447 40 0.002
01_06_1412 - 37140654-37141088,37141549-37142214 40 0.002
07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883... 39 0.004
10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573 38 0.007
09_02_0366 + 7941550-7942161,7942230-7942775 38 0.009
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 38 0.009
02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812 38 0.009
01_01_0990 + 7847066-7847478,7847713-7848679 38 0.009
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686... 38 0.012
09_04_0564 + 18565583-18566449,18569662-18570123 37 0.021
08_02_1172 + 24898290-24899141,24900864-24901328 37 0.021
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 37 0.021
01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193 36 0.027
01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648 36 0.027
04_04_0823 + 28383798-28383864,28384475-28384877,28387388-283879... 36 0.048
02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357 36 0.048
02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393 36 0.048
01_05_0421 + 21990034-21990392,21991691-21992681 36 0.048
03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524 35 0.063
09_02_0226 - 6007656-6008063,6012166-6012678 35 0.084
03_03_0188 + 15269347-15270213 34 0.15
12_01_0268 - 1941515-1941534,1941868-1942057,1942155-1942322,194... 33 0.19
01_06_1729 + 39486553-39487413,39487953-39488020,39489574-394901... 33 0.19
04_03_0708 + 18888085-18889337,18889583-18889661,18890458-18890781 32 0.59
02_05_0925 - 32768815-32769654 31 0.78
02_01_0613 - 4594749-4595333 31 1.4
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281... 30 1.8
12_01_0454 + 3580332-3581714 29 3.2
07_03_1165 - 24459156-24460139 29 5.5
06_01_0732 + 5397217-5397327,5399010-5399831 29 5.5
09_03_0195 + 13370379-13370489,13371229-13371768 28 9.6
07_01_0377 + 2823602-2823880,2824372-2824569,2824611-2824709 28 9.6
04_04_1106 - 30948626-30948724,30948841-30949176,30949231-309493... 28 9.6
04_04_0198 + 23502657-23502900,23505228-23505298,23505690-235057... 28 9.6
04_01_0334 - 4395823-4395830,4398575-4399658,4401651-4402019 28 9.6
03_04_0134 - 17593449-17594702 28 9.6
03_01_0515 - 3864796-3865425 28 9.6
02_05_0258 + 27222058-27223198,27223297-27223460,27224399-272245... 28 9.6
>05_01_0042 -
290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHH--CRRAFADRSNLRAHLQTHSDVKKYSC--SGCGKTFSRMSL 580
L+ H HTG+K F C H C +AF+ NLR+HL+TH+ + C CGK F+ S
Sbjct: 133 LKRHHLIHTGQKDFICPHPGCGKAFSLDFNLRSHLKTHALENYHVCPFPACGKRFTSDSK 192
Query: 579 LSKHLEG 559
L H++G
Sbjct: 193 LKSHVKG 199
Score = 36.7 bits (81), Expect = 0.021
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -1
Query: 705 SCHHCRRAFADRSNLRAHLQTHSDVKKYSCS--GCGKTFSRMSLLSKH 568
S +C + F D + LR H H++ ++Y C GCGK F S L +H
Sbjct: 90 SYENCGKTFVDVAALRKHAHVHNE-RQYICQEPGCGKKFVDSSKLKRH 136
>09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361
Length = 504
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/55 (36%), Positives = 34/55 (61%)
Frame = -1
Query: 732 RTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
R H+G + ++C C +A+A S+ +AHL+T + +SC CG+ FSR+ +H
Sbjct: 136 RKHSGHRQWACARCSKAYAVHSDYKAHLKT-CGTRGHSCD-CGRVFSRVESFIEH 188
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -1
Query: 714 KPFSCHHC-RRAFADRSNLRAHLQT-HSDVKKYSCSGCGKTFSRMSLLSKHLEGGCGVPG 541
+P HH A D ++ H + HS ++++C+ C K ++ S HL+ CG G
Sbjct: 112 EPTCLHHDPSHALGDLVGIKKHFRRKHSGHRQWACARCSKAYAVHSDYKAHLK-TCGTRG 170
>02_04_0194 +
20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 45.6 bits (103), Expect = 4e-05
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 14/106 (13%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHH--CRR--AFADRSNLRAHLQTHSDVKKYSCS--GCGKTFSRM 586
L+ H HTGEK F C H C + AF+ NL+AH++THS + C C + F++
Sbjct: 89 LKRHFLIHTGEKNFVCPHEGCGKVLAFSLDFNLKAHMKTHSVDNYHVCKYPECARRFTQE 148
Query: 585 SLLSKHL-----EGGCGVPGSTPYEYRPEAMQVAHAH---PNLPPP 472
S L H+ +GG PG + A ++H P+ PP
Sbjct: 149 SKLRAHIKQQHEKGGLQNPGGSATNRSGLADHSHNSHTPKPSAAPP 194
Score = 34.7 bits (76), Expect = 0.084
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = -1
Query: 723 TGEKPFSCHH--CRRAFADRSNLRAHLQTHSDVKKYSC--SGCGKTFSRMSLLSKH 568
T E F C + C + F D LR H H + ++Y C +GC K F S L +H
Sbjct: 38 TTEVLFLCSYEGCGKTFVDAGALRKHAHVHGE-RQYVCHYAGCDKKFLDSSKLKRH 92
>08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413
Length = 533
Score = 45.2 bits (102), Expect = 6e-05
Identities = 19/55 (34%), Positives = 34/55 (61%)
Frame = -1
Query: 732 RTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
R H+G + ++C C +A+A S+ +AHL+T + ++C CG+ FSR+ +H
Sbjct: 135 RKHSGHRQWACSRCSKAYAVHSDYKAHLKT-CGTRGHTCD-CGRVFSRVESFIEH 187
Score = 32.3 bits (70), Expect = 0.45
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -1
Query: 714 KPFSCHHC-RRAFADRSNLRAHLQT-HSDVKKYSCSGCGKTFSRMSLLSKHLEGGCGVPG 541
+P HH A D ++ H + HS ++++CS C K ++ S HL+ CG G
Sbjct: 111 EPTCLHHDPSHALGDLVGIKKHFRRKHSGHRQWACSRCSKAYAVHSDYKAHLK-TCGTRG 169
Query: 540 ST 535
T
Sbjct: 170 HT 171
>12_01_1024 - 10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = -1
Query: 738 HIRTHTGEKPFSC--HHCRRAFADRSNLRAHLQTHSDVKKYSCS--GCGKTFSRMSLLSK 571
H + H E+P C C++AF H++ H+ V+ Y C GCG+TF +S S+
Sbjct: 1273 HRKVHIDERPLKCTWKGCKKAFKWPWARTEHMRVHTGVRPYECQEPGCGQTFRFVSDFSR 1332
Query: 570 H 568
H
Sbjct: 1333 H 1333
>05_05_0022 + 21592403-21593083,21593720-21594208
Length = 389
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/87 (31%), Positives = 38/87 (43%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
LQ H + G KPF+C C + FA + + R H + K++ C+ CG F L+ H
Sbjct: 285 LQTHYKRKHGAKPFACRRCAKPFAVKGDWRTHEKNCG--KRWFCA-CGSDFKHKRSLNDH 341
Query: 567 LEGGCGVPGSTPYEYRPEAMQVAHAHP 487
+ G G P A A A P
Sbjct: 342 VRSFGG--GHFPVAAAAAAAHAAAAPP 366
>02_04_0316 - 21978330-21979397
Length = 355
Score = 41.9 bits (94), Expect = 6e-04
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = -1
Query: 756 ALXLQGHIRTHTGEKPFSCHHC--RRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMS 583
A+ + H R K ++C C ++ FA ++LR+HL+ + ++ CS CG TFSR
Sbjct: 214 AVCARNHFRRSHCPKLYACERCGGKKRFAVLADLRSHLRHCGEEAQWRCS-CGTTFSRKD 272
Query: 582 LLSKHL 565
L HL
Sbjct: 273 KLFGHL 278
>05_01_0160 +
1081416-1081647,1081840-1082012,1082169-1082246,
1082372-1082529,1082558-1082709,1083232-1083290,
1083633-1083912,1084235-1084470,1084601-1084744,
1084845-1085012
Length = 559
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/73 (38%), Positives = 36/73 (49%), Gaps = 11/73 (15%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSC--HHCRRAFADRSNLRAHLQT-HSD------VKKYSC--SGCGK 601
L H+ TH G K F+C C R F + N++ H+Q H D K++ C CGK
Sbjct: 304 LNRHLLTHQG-KLFACPMEGCNRKFTIKGNIQRHVQEMHKDGSPCESKKEFICPEENCGK 362
Query: 600 TFSRMSLLSKHLE 562
TF S L KH E
Sbjct: 363 TFKYASKLQKHEE 375
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Frame = -1
Query: 738 HIRTHTGE---KPFSCH--HCRRAFADRSNLRAHLQT-HSDVKKYSC--SGCGKTFSRMS 583
H R H G + CH C+ +F+ +SNL H++ H + + C SGCGK+FS
Sbjct: 430 HQRMHEGSCVTERVRCHLKDCKLSFSKKSNLDKHVKAVHEQKRPFVCGFSGCGKSFSYKH 489
Query: 582 LLSKH 568
+ H
Sbjct: 490 VRDNH 494
>06_03_0743 + 24069752-24070483,24071890-24072345
Length = 395
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/61 (36%), Positives = 29/61 (47%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
LQ H + G KPF C C +AFA R + R H + K + C+ CG F L H
Sbjct: 299 LQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCG--KLWYCA-CGSDFKHKRSLKDH 355
Query: 567 L 565
+
Sbjct: 356 I 356
>03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447
Length = 420
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = -1
Query: 732 RTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKHL 565
R H G + + C C + +A +S+ +AHL+T + +SC CG+ FSR S +L
Sbjct: 123 RKHGGRRQWVCARCAKGYAVQSDYKAHLKT-CGTRGHSCD-CGRVFSRKITRSLNL 176
>01_06_1412 - 37140654-37141088,37141549-37142214
Length = 366
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
LQ H + G KPF C C + FA + + R H + K++ C+ CG F L+ H
Sbjct: 277 LQTHYKRKHGAKPFRCRRCAKPFAVKGDWRTHEKNCG--KRWFCA-CGSDFKHKRSLNDH 333
Query: 567 L 565
+
Sbjct: 334 V 334
>07_03_1042 +
23487326-23487443,23487555-23487957,23488057-23488397,
23488621-23489660
Length = 633
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
++ H GEK ++C C + +A +++L+AH +T ++Y C CG F+R H
Sbjct: 124 IKKHFCRKHGEKRWTCQRCGKRYAVQADLKAHTKT-CGTREYRCD-CGTLFTRRDSFVTH 181
Query: 567 LEGGCG 550
CG
Sbjct: 182 -RAFCG 186
Score = 32.3 bits (70), Expect = 0.45
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -1
Query: 732 RTHTGEKPFSCHHC-RRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKHLEGG 556
R + +P HH RA D + ++ H K+++C CGK ++ + L H +
Sbjct: 100 RVYVCPEPGCVHHNPTRALGDLTGIKKHFCRKHGEKRWTCQRCGKRYAVQADLKAHTK-T 158
Query: 555 CG 550
CG
Sbjct: 159 CG 160
>10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573
Length = 409
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
++ H GEK + C C + +A S+ +AH++ + ++Y C CG FSR L H
Sbjct: 111 IKKHFSRKHGEKRWRCERCGKRYAVHSDWKAHVK-NCGTREYRCD-CGILFSRKDSLLTH 168
>09_02_0366 + 7941550-7942161,7942230-7942775
Length = 385
Score = 37.9 bits (84), Expect = 0.009
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
LQ H R G +P++C C + FA R + R H + K + C CG F L H
Sbjct: 266 LQTHYRRKHGARPYACRRCGKRFAVRGDWRTHEKNCG--KLWFCV-CGSDFKHKRSLKDH 322
Query: 567 LE--GGCGVP 544
+ GG P
Sbjct: 323 VRSFGGGHAP 332
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = -1
Query: 699 HHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKHLEGGCG 550
H R D L+ H + + Y+C CGK F+ H E CG
Sbjct: 254 HPRARPLKDFRTLQTHYRRKHGARPYACRRCGKRFAVRGDWRTH-EKNCG 302
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = -1
Query: 627 KYSCSGCGKTFSRMSLLSKHLEGGCGVPGSTPYEYRPEAMQVAHAHPNLPPPATV 463
++SC+ C KTF+R + + H+ G + Y E+++ A PPA++
Sbjct: 187 QFSCAVCNKTFNRFNNMQMHMWG-----HGSQYRKGSESLRGAITVGGAAPPASL 236
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
++ H GEK + C C + +A +S+ +AH +T ++Y C CG FSR H
Sbjct: 111 IKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHTKTCGS-REYRCD-CGTLFSRRDSFITH 168
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = -1
Query: 732 RTHTGEKPFSCHHC-RRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKHLEGG 556
R + +P HH RA D + ++ H KK+ C C K ++ S H +
Sbjct: 87 RVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHTK-T 145
Query: 555 CG 550
CG
Sbjct: 146 CG 147
>02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812
Length = 492
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
++ H GEK + C C + +A +S+ +AH + K+Y C CG FSR H
Sbjct: 129 IKKHYSRKHGEKKWKCDRCSKKYAVQSDWKAHTKI-CGTKEYRCD-CGTIFSRKDSFITH 186
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/44 (27%), Positives = 18/44 (40%)
Frame = -1
Query: 699 HHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
H RA D + ++ H KK+ C C K ++ S H
Sbjct: 117 HDATRALGDLTGIKKHYSRKHGEKKWKCDRCSKKYAVQSDWKAH 160
>01_01_0990 + 7847066-7847478,7847713-7848679
Length = 459
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
++ H GEK + C C + +A +S+ +AH +T ++Y C CG FSR H
Sbjct: 88 IKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFSRRDSFITH 145
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = -1
Query: 717 EKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKHLEGGCG 550
EK H+ RA D + ++ H KK+ C C K ++ S H + CG
Sbjct: 70 EKSCVHHNPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSK-TCG 124
>09_06_0235 -
21763470-21764511,21767865-21768261,21768625-21768632,
21769489-21769565
Length = 507
Score = 37.5 bits (83), Expect = 0.012
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = -1
Query: 738 HIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
+ R H GEK + C C + +A +S+ +AH +T ++Y C CG FSR H
Sbjct: 115 YCRKH-GEKKWRCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFSRRDSFITH 168
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = -1
Query: 732 RTHTGEKPFSCHHC-RRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKHLEGG 556
R + +P HH RA D + ++ H KK+ C C K ++ S H +
Sbjct: 87 RVYLCPEPSCVHHDPSRALGDLTGIKKHYCRKHGEKKWRCDKCSKRYAVQSDWKAHSK-T 145
Query: 555 CG 550
CG
Sbjct: 146 CG 147
>09_04_0564 + 18565583-18566449,18569662-18570123
Length = 442
Score = 36.7 bits (81), Expect = 0.021
Identities = 21/60 (35%), Positives = 27/60 (45%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
LQ H + G KPF C C +AFA + + R H + K + C CG F L H
Sbjct: 344 LQTHYKRKHGLKPFLCRKCGKAFAVKGDWRTHEKNCG--KLWYCL-CGSEFKHKRSLKDH 400
>08_02_1172 + 24898290-24899141,24900864-24901328
Length = 438
Score = 36.7 bits (81), Expect = 0.021
Identities = 21/60 (35%), Positives = 27/60 (45%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
LQ H + G KPF C C +AFA + + R H + K + C CG F L H
Sbjct: 339 LQTHYKRKHGLKPFLCRKCGKAFAVKGDWRTHEKNCG--KLWYCL-CGSEFKHKRSLKDH 395
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 36.7 bits (81), Expect = 0.021
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -1
Query: 717 EKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSC--SGCGKTFSRMSLLSKHL 565
E +C C +F ++L+ H+Q+HSD + + C C ++ R L++H+
Sbjct: 57 EGDHTCQECGASFQKPAHLKQHMQSHSDERSFICPLEDCPFSYIRKDHLNRHM 109
Score = 32.3 bits (70), Expect = 0.45
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 11/73 (15%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHH--CRRAFADRSNLRAHL-QTHSDV------KKYSCS--GCGK 601
L H+ H G K F+C C R F+ ++N++ H+ + H D +++ C GC K
Sbjct: 105 LNRHMLKHQG-KLFTCSMDGCGRKFSIKANMQRHVKEIHEDETATKSNRQFVCKEEGCNK 163
Query: 600 TFSRMSLLSKHLE 562
F S + KH E
Sbjct: 164 VFKYASKMKKHEE 176
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
Frame = -1
Query: 672 RSNLRAHLQTHSDV---KKYSCS--GCGKTFSRMSLLSKHLE 562
+ N++ HL+ H +V ++ CS GC +FS S L+KH++
Sbjct: 225 KKNIKRHLRAHEEVPSTERIKCSFEGCECSFSNKSNLTKHIK 266
>01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193
Length = 476
Score = 36.3 bits (80), Expect = 0.027
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
++ H GEK + C C + +A S+ +AH + ++Y C CG FSR H
Sbjct: 151 IKKHFCRKHGEKKWKCDRCGKRYAVHSDWKAHSKV-CGTREYKCD-CGTVFSRRDSFVTH 208
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = -1
Query: 705 SC-HHC-RRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFS 592
SC HH RA D + ++ H KK+ C CGK ++
Sbjct: 135 SCVHHSPSRALGDLTGIKKHFCRKHGEKKWKCDRCGKRYA 174
>01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648
Length = 487
Score = 36.3 bits (80), Expect = 0.027
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
++ H GEK + C C + +A S+ +AH + ++Y C CG FSR H
Sbjct: 138 IKKHFSRKHGEKKWKCDKCSKRYAVHSDWKAHSKV-CGTREYRCD-CGTLFSRRDSFITH 195
>04_04_0823 +
28383798-28383864,28384475-28384877,28387388-28387932,
28387978-28388594
Length = 543
Score = 35.5 bits (78), Expect = 0.048
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
++ H GEK + C C + +A +S+ +AH + ++Y C CG FSR H
Sbjct: 107 IKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKI-CGTREYRCD-CGTLFSRRDSFITH 164
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = -1
Query: 732 RTHTGEKPFSCHHC-RRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
R + +P HH RA D + ++ H KK+ C C K ++ S H
Sbjct: 83 RVYLCPEPTCVHHDPARALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAH 138
>02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357
Length = 215
Score = 35.5 bits (78), Expect = 0.048
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRM 586
++ H GEK + C C + +A +S+ +AH + ++Y C CG FSR+
Sbjct: 159 IKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKI-CGTREYRCD-CGTLFSRL 210
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = -1
Query: 732 RTHTGEKPFSCHHC-RRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
R + +P HH RA D + ++ H KK+ C C K ++ S H
Sbjct: 135 RVYLCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAH 190
>02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393
Length = 322
Score = 35.5 bits (78), Expect = 0.048
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
LQ H R G + F+C C + FA R + R H + + + C+ CG F L+ H
Sbjct: 235 LQTHYRRRHGARDFACRRCAKRFAVRGDWRTHEKNCG--RLWRCA-CGAHFRHKRSLNDH 291
>01_05_0421 + 21990034-21990392,21991691-21992681
Length = 449
Score = 35.5 bits (78), Expect = 0.048
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
++ H GEK + C C + +A S+ +AH + ++Y C CG FSR H
Sbjct: 70 IKKHFFRKHGEKKWKCDKCSKKYAVHSDWKAHSKI-CGTREYKCD-CGTIFSRRDSFITH 127
>03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524
Length = 651
Score = 35.1 bits (77), Expect = 0.063
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSC--HHCRRAFADRSNLRAHLQTHSDVKKYSCS--GCGKTFSRMSL 580
L+ H H + P+ C C AF + H Q H+ + Y C+ GC K + +S
Sbjct: 580 LRRHQSIHNDDMPYKCPWEGCSMAFKWSWDRGEHFQVHAGKRPYKCTTPGCSKIYKFVSD 639
Query: 579 LSKH 568
++H
Sbjct: 640 FTRH 643
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Frame = -1
Query: 693 CRRAFADRSNLRAHLQTHSDVKKYSC--SGCGKTF 595
C R F LR H H+D Y C GC F
Sbjct: 570 CGRHFRSHKYLRRHQSIHNDDMPYKCPWEGCSMAF 604
>09_02_0226 - 6007656-6008063,6012166-6012678
Length = 306
Score = 34.7 bits (76), Expect = 0.084
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
LQ H + KPF+C C + A R + R H + +++ C+ CG F L H
Sbjct: 226 LQTHYKRKHCAKPFACRKCGKPLAVRGDWRTHEKNCG--RRWHCA-CGSDFKHKRSLKDH 282
Query: 567 L 565
+
Sbjct: 283 I 283
>03_03_0188 + 15269347-15270213
Length = 288
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = -1
Query: 675 DRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKHLEGGCGVPGSTPYEYRPEAMQVAH 496
D SN RA +Q + + R LL + GG +P P+ RP ++ H
Sbjct: 107 DTSNFRAMVQEFTGFPAPPFAAAPPPAVRPRLLGG-VGGGHQLP---PFLLRPSPLKYTH 162
Query: 495 AHPNLPPPATVH 460
+HP PPP +H
Sbjct: 163 SHPTPPPPPPLH 174
>12_01_0268 -
1941515-1941534,1941868-1942057,1942155-1942322,
1943425-1943568,1944284-1944443,1944512-1944621,
1944900-1945019,1945649-1945766,1946610-1946729,
1947228-1947285,1947590-1947723,1949332-1949414,
1949544-1949786,1949851-1949976,1950075-1951562
Length = 1093
Score = 33.5 bits (73), Expect = 0.19
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = -1
Query: 669 SNLRAHLQTHSDVKKYSCSGCGKTFS 592
+NL++ L+ + V KY+C CGK+FS
Sbjct: 844 ANLKSQLENTNTVDKYTCPNCGKSFS 869
>01_06_1729 + 39486553-39487413,39487953-39488020,39489574-39490154,
39490623-39491432,39491738-39493035
Length = 1205
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = -1
Query: 738 HIRTHTGEKPFSCHH--CRRAFADRSNLRAH-LQTHSDVKK 625
H+R HTG++P+ CH C + F S+ H +T VKK
Sbjct: 1159 HLRVHTGDRPYVCHEPGCAQTFRFVSDFSRHKRKTGHSVKK 1199
>04_03_0708 + 18888085-18889337,18889583-18889661,18890458-18890781
Length = 551
Score = 31.9 bits (69), Expect = 0.59
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 376 IHYGEPITCVINVLQY-LRSEIHSVLLIGVHGSGRWEVWV 492
++Y + T V+ L+Y + +H V ++G GSG WE V
Sbjct: 179 VYYRDEDTGVLQYLEYDINDIVHQVFVLGPSGSGDWEATV 218
>02_05_0925 - 32768815-32769654
Length = 279
Score = 31.5 bits (68), Expect = 0.78
Identities = 23/94 (24%), Positives = 33/94 (35%)
Frame = -1
Query: 741 GHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKHLE 562
G T E+ F CH+C R F L H H ++++ K + L+ H
Sbjct: 79 GGAATAAAERKFECHYCCRNFPTSQALGGHQNAHKRERQHA-----KRAHLQASLAMHRY 133
Query: 561 GGCGVPGSTPYEYRPEAMQVAHAHPNLPPPATVH 460
+ G Y + H P PPP H
Sbjct: 134 MPGHMYGLFNYHHHIGGRFDHHPPPPPPPPPPAH 167
>02_01_0613 - 4594749-4595333
Length = 194
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -1
Query: 708 FSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCG 604
F+CH+CRR F L H H + + G G
Sbjct: 80 FACHYCRREFYSSQALGGHQNAHKRERTLARRGAG 114
>03_01_0360 +
2815067-2816033,2816120-2816198,2816275-2816342,
2817382-2817464,2821566-2823083
Length = 904
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -1
Query: 738 HIRTHTGEKPFSCH--HCRRAFADRSNLRAH 652
HIR HTGE+P+ C C ++F S+ H
Sbjct: 867 HIRVHTGERPYKCSAPDCGQSFRYVSDYSRH 897
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = -1
Query: 693 CRRAFADRSNLRAHLQTHSDVKKYSC--SGCGKTFSRMSLLSKHL 565
C + F+ L+ H H D + + C GC TF + ++H+
Sbjct: 824 CGKRFSSHKYLKRHQCVHRDERPFKCPWDGCPMTFKWLWAQTEHI 868
>12_01_0454 + 3580332-3581714
Length = 460
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = -1
Query: 699 HHCRRAFADRSNLRAHLQTHS---DVKKYSCSGCGKTFSRMSLLSKHL 565
H C R A R ++ A L+TH ++ CS CG +FSR L H+
Sbjct: 314 HVCGRCGAKRFSVMADLKTHEKHCGRDRWLCS-CGTSFSRKDKLFAHV 360
>07_03_1165 - 24459156-24460139
Length = 327
Score = 28.7 bits (61), Expect = 5.5
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -1
Query: 717 EKPFSCHHCRRAFADRSNLRAHLQTH 640
E F CH C + F R + H++ H
Sbjct: 110 EASFPCHLCNKEFGSRKAVHGHMRVH 135
>06_01_0732 + 5397217-5397327,5399010-5399831
Length = 310
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -1
Query: 708 FSCHHCRRAFADRSNLRAHLQTHSDVKKYS 619
F CH+CRR F L H H ++++
Sbjct: 113 FECHYCRRNFPTSQALGGHQNAHKRERQHA 142
>09_03_0195 + 13370379-13370489,13371229-13371768
Length = 216
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -1
Query: 702 CHHCR--RAFADRSNLRAHLQTHSDVKKYSC 616
C CR + D S + +HL T+ +KKY+C
Sbjct: 80 CKDCRNEKMILDSSKVHSHLITNGFMKKYTC 110
>07_01_0377 + 2823602-2823880,2824372-2824569,2824611-2824709
Length = 191
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 370 VLIHYGEPITCVINVLQYL 426
+LIH G PI IN+LQY+
Sbjct: 42 ILIHRGRPICGSINILQYI 60
>04_04_1106 -
30948626-30948724,30948841-30949176,30949231-30949353,
30949425-30949517,30949603-30949806,30949884-30950134,
30951011-30952391,30952737-30953174
Length = 974
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 618 CSGCGKTFSRMSLLSKHLEGGCGVPGSTPYEYRP 517
C+GCG+T L++ + C +P S P E P
Sbjct: 24 CAGCGETLEVEPGLTEFICPDCAMPQSLPPELMP 57
>04_04_0198 +
23502657-23502900,23505228-23505298,23505690-23505727,
23505905-23507693
Length = 713
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 630 KKYSCSGCGKTFSRMSLLSKHL 565
+KY CS C KTFS L H+
Sbjct: 461 RKYECSECHKTFSTHQALGGHV 482
>04_01_0334 - 4395823-4395830,4398575-4399658,4401651-4402019
Length = 486
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = -1
Query: 702 CHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKHLEGGCGVPG 541
C C + F +NLR H++ H D K + + T + M ++ C G
Sbjct: 324 CQVCGKGFKRDANLRMHMRAHGDEYK-TAAALTSTGAGMRAAARRCSYSCPAEG 376
>03_04_0134 - 17593449-17594702
Length = 417
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = -1
Query: 741 GHIRTHTGEKP--FSCHHCRRAFADRSNLRAHLQTHSDVKKYSCS 613
G T GEK + CH C RAF L H +H + +CS
Sbjct: 266 GAASTAGGEKRGRYECHGCGRAFLSYQALGGHRASHKRINS-NCS 309
>03_01_0515 - 3864796-3865425
Length = 209
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 385 GEPITCVINVLQYLRSEIHSVLLIGVHGSGRWEVW 489
G VINV +R+ +SV + G+ G+ W++W
Sbjct: 169 GSNYQLVINVAAGVRTAQYSVFVWGILGTTTWKLW 203
>02_05_0258 +
27222058-27223198,27223297-27223460,27224399-27224575,
27224713-27224761,27224991-27225793
Length = 777
Score = 27.9 bits (59), Expect = 9.6
Identities = 20/81 (24%), Positives = 35/81 (43%)
Frame = -1
Query: 711 PFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKHLEGGCGVPGSTP 532
P S H FA S + + S ++ + +G + + +L H G G P
Sbjct: 86 PHSSSHIN--FAPSSGSESGSVSSSPSRRVA-AGHEQLYQPSALPFPHYAYGYGYAPEPP 142
Query: 531 YEYRPEAMQVAHAHPNLPPPA 469
+ Y P ++Q+ +A PPP+
Sbjct: 143 FGYPPGSLQLYYARSRPPPPS 163
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,464,129
Number of Sequences: 37544
Number of extensions: 411114
Number of successful extensions: 1311
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1303
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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