Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12d02r
(783 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 64 2e-12
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 62 6e-12
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 56 5e-10
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 56 5e-10
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 30 0.021
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 29 0.049
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 26 0.34
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 5.6
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 22 7.4
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 9.8
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 9.8
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 9.8
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 9.8
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 21 9.8
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 21 9.8
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 9.8
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 21 9.8
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 21 9.8
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 21 9.8
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 63.7 bits (148), Expect = 2e-12
Identities = 25/57 (43%), Positives = 34/57 (59%)
Frame = -1
Query: 738 HIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
H+RTHTGEKP+ C C + F L+ H +TH+ K Y+C CGK+F +L H
Sbjct: 194 HMRTHTGEKPYVCKACGKGFTCSKQLKVHTRTHTGEKPYTCDICGKSFGYNHVLKLH 250
Score = 63.3 bits (147), Expect = 2e-12
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
L H RTHTGEKP+ C +C ++F+ + NL H + H+ + Y C C + F L +H
Sbjct: 107 LTRHYRTHTGEKPYQCEYCSKSFSVKENLSVHRRIHTKERPYKCDVCERAFEHSGKLHRH 166
Query: 567 L 565
+
Sbjct: 167 M 167
Score = 58.0 bits (134), Expect = 9e-11
Identities = 24/60 (40%), Positives = 31/60 (51%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
L H+R HTGE+P C C + F L H++TH+ K Y C CGK F+ L H
Sbjct: 163 LHRHMRIHTGERPHKCTVCSKTFIQSGQLVIHMRTHTGEKPYVCKACGKGFTCSKQLKVH 222
Score = 55.6 bits (128), Expect = 5e-10
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
L+ H RTHTGEKP++C C ++F L+ H H K Y C+ C +TF + H
Sbjct: 219 LKVHTRTHTGEKPYTCDICGKSFGYNHVLKLHQVAHYGEKVYKCTLCHETFGSKKTMELH 278
Query: 567 LE 562
++
Sbjct: 279 IK 280
Score = 54.8 bits (126), Expect = 9e-10
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = -1
Query: 744 QGHIRTH--TGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSK 571
Q H+R+H GE P+ C+ C + FA + L H +TH+ K Y C C K+FS LS
Sbjct: 78 QSHLRSHGKEGEDPYRCNICGKTFAVPARLTRHYRTHTGEKPYQCEYCSKSFSVKENLSV 137
Query: 570 H 568
H
Sbjct: 138 H 138
Score = 54.0 bits (124), Expect = 1e-09
Identities = 23/66 (34%), Positives = 33/66 (50%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
L H R HT E+P+ C C RAF L H++ H+ + + C+ C KTF + L H
Sbjct: 135 LSVHRRIHTKERPYKCDVCERAFEHSGKLHRHMRIHTGERPHKCTVCSKTFIQSGQLVIH 194
Query: 567 LEGGCG 550
+ G
Sbjct: 195 MRTHTG 200
Score = 43.2 bits (97), Expect = 3e-06
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Frame = -1
Query: 729 THTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKK--YSCSGCGKTFSRMSLLSKH 568
T+ EK + C C++AF ++ ++HL++H + Y C+ CGKTF+ + L++H
Sbjct: 55 TNIEEKTYQCLLCQKAFDQKNLYQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRH 110
Score = 37.1 bits (82), Expect = 2e-04
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSD 634
L+ H H GEK + C C F + + H++THSD
Sbjct: 247 LKLHQVAHYGEKVYKCTLCHETFGSKKTMELHIKTHSD 284
Score = 28.7 bits (61), Expect = 0.065
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -1
Query: 645 THSDVKKYSCSGCGKTFSRMSLLSKHLEGGCGVPGSTPY 529
T+ + K Y C C K F + +L HL G G PY
Sbjct: 55 TNIEEKTYQCLLCQKAFDQKNLYQSHLRSH-GKEGEDPY 92
Score = 21.8 bits (44), Expect = 7.4
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -2
Query: 497 MRTQTSHRPLPCTPINKT 444
MR T RP CT +KT
Sbjct: 167 MRIHTGERPHKCTVCSKT 184
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 62.1 bits (144), Expect = 6e-12
Identities = 24/56 (42%), Positives = 35/56 (62%)
Frame = -1
Query: 732 RTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKHL 565
RTHTGEKPF C C + F +L+ H++ H+ K Y CS C + F +++ L +HL
Sbjct: 2 RTHTGEKPFECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHL 57
Score = 60.9 bits (141), Expect = 1e-11
Identities = 23/47 (48%), Positives = 31/47 (65%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGC 607
L+ H+R HTGEKP+ C HC R F +NLR HL+ H+ + Y+C C
Sbjct: 25 LKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTGERPYACELC 71
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 55.6 bits (128), Expect = 5e-10
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFA 676
LQGHIRTHTGEKPFSC HC RAFA
Sbjct: 58 LQGHIRTHTGEKPFSCQHCNRAFA 81
Score = 50.0 bits (114), Expect = 2e-08
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFS 592
L+ HIRTHT P CH C +AF+ L+ H++TH+ K +SC C + F+
Sbjct: 32 LKMHIRTHT--LPCKCHLCGKAFSRPWLLQGHIRTHTGEKPFSCQHCNRAFA 81
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = -1
Query: 717 EKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKHLEGGCG 550
+K FSC +C + + L+ H++TH+ K C CGK FSR LL H+ G
Sbjct: 14 KKSFSCKYCEKVYVSLGALKMHIRTHTLPCK--CHLCGKAFSRPWLLQGHIRTHTG 67
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 55.6 bits (128), Expect = 5e-10
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKH 568
L+ H+R H G KPF C C + ++S L +HL++HS+V +Y C+ C L H
Sbjct: 4 LEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSHLKSHSNVYQYRCANCTYATKYCHSLKLH 63
Query: 567 L 565
L
Sbjct: 64 L 64
Score = 29.9 bits (64), Expect = 0.028
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -1
Query: 672 RSNLRAHLQTHSDVKKYSCSGCGKTFSRMSLLSKHLEGGCGVPGSTPYEYR 520
+ +L HL+ H K + C C + S+L+ HL+ V Y+YR
Sbjct: 1 KHHLEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSHLKSHSNV-----YQYR 46
Score = 26.2 bits (55), Expect = 0.34
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = -1
Query: 747 LQGHIRTHTGEKPFSCHHCRRAFADRSNLRAHLQTHS 637
L H+++H+ + C +C A +L+ HL+ +S
Sbjct: 32 LNSHLKSHSNVYQYRCANCTYATKYCHSLKLHLRKYS 68
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 30.3 bits (65), Expect = 0.021
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 714 KPFSCHHCRRAFADRSNLRAHLQTHSDVKK--YSCSGCGKTFSRMSLLSKH 568
+P C +CRR F+ +L+ H Q + Y C C + + + L+ H
Sbjct: 4 EPQECPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTH 54
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 29.1 bits (62), Expect = 0.049
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -1
Query: 708 FSCHHCRRAFADRSNLRAHLQ-THS-DVKKYSCSGCGKTFSRMSLLSKH 568
F C C + + LR H+Q H+ K+ C+ C + +S ++ L H
Sbjct: 3 FRCEPCNKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLNSLRNH 51
Score = 21.4 bits (43), Expect = 9.8
Identities = 7/32 (21%), Positives = 15/32 (46%)
Frame = -1
Query: 627 KYSCSGCGKTFSRMSLLSKHLEGGCGVPGSTP 532
++ C C K + ++ L +H++ P P
Sbjct: 2 EFRCEPCNKILTSLTRLRRHIQNVHTRPSKEP 33
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 26.2 bits (55), Expect = 0.34
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 624 YSCSGCGKTFSRMSLLSKHLE 562
Y+C CGKT S L +H E
Sbjct: 372 YTCDVCGKTLSTKLTLKRHKE 392
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 22.2 bits (45), Expect = 5.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 277 TIEIYTVILTHFKILQSNLDTHTYP 351
T+ I+T I +L++ LDT YP
Sbjct: 536 TVPIHTWIHPWLPLLRNRLDTLIYP 560
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 21.8 bits (44), Expect = 7.4
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -2
Query: 260 SYS*VVSHANRDLTLVIWHLPSVIHLFKIKFINEIVIL 147
S S +SHA + LV +HL + F I+ V+L
Sbjct: 190 SASTTLSHAEYSMLLVYFHLQRHMGNFLIQVYGPCVLL 227
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 9.8
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = -1
Query: 159 NCNPKPCT 136
NC P PCT
Sbjct: 429 NCGPNPCT 436
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 9.8
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = -1
Query: 159 NCNPKPCT 136
NC P PCT
Sbjct: 415 NCGPNPCT 422
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 9.8
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = -1
Query: 159 NCNPKPCT 136
NC P PCT
Sbjct: 449 NCGPNPCT 456
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 9.8
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = -1
Query: 159 NCNPKPCT 136
NC P PCT
Sbjct: 398 NCGPNPCT 405
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 21.4 bits (43), Expect = 9.8
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 597 FSRMSLLSKHLEGGCGVPGSTPYEY 523
FS+ L K LE G +TP++Y
Sbjct: 150 FSKYDKLKKKLEEWTGKNITTPWDY 174
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 21.4 bits (43), Expect = 9.8
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 597 FSRMSLLSKHLEGGCGVPGSTPYEY 523
FS+ L K LE G +TP++Y
Sbjct: 165 FSKYDKLKKKLEEWTGKNITTPWDY 189
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.4 bits (43), Expect = 9.8
Identities = 18/70 (25%), Positives = 28/70 (40%)
Frame = -2
Query: 623 IRALVVVKPFHVCPF*VNIWKADVEYQAARLTSIVLKQCKLRMRTQTSHRPLPCTPINKT 444
IR + V PF F ++ A RL V + + + +P+ PI
Sbjct: 159 IREEIRVDPFRT-GFEHKRQPTSIDLNAVRLCFQVFLEGSQKRKFNVPLQPVVSDPIFDK 217
Query: 443 EWISDLKYCK 414
+ +SDL CK
Sbjct: 218 KAMSDLVICK 227
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.4 bits (43), Expect = 9.8
Identities = 18/70 (25%), Positives = 28/70 (40%)
Frame = -2
Query: 623 IRALVVVKPFHVCPF*VNIWKADVEYQAARLTSIVLKQCKLRMRTQTSHRPLPCTPINKT 444
IR + V PF F ++ A RL V + + + +P+ PI
Sbjct: 159 IREEIRVDPFRT-GFEHKRQPTSIDLNAVRLCFQVFLEGSQKRKFNVPLQPVVSDPIFDK 217
Query: 443 EWISDLKYCK 414
+ +SDL CK
Sbjct: 218 KAMSDLVICK 227
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 21.4 bits (43), Expect = 9.8
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 597 FSRMSLLSKHLEGGCGVPGSTPYEY 523
FS+ L K LE G +TP++Y
Sbjct: 53 FSKYDKLKKKLEEWTGKNITTPWDY 77
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 21.4 bits (43), Expect = 9.8
Identities = 7/22 (31%), Positives = 12/22 (54%)
Frame = -1
Query: 630 KKYSCSGCGKTFSRMSLLSKHL 565
K ++C CGK + L +H+
Sbjct: 4 KLFTCQLCGKVLCSKASLKRHV 25
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,301
Number of Sequences: 438
Number of extensions: 4668
Number of successful extensions: 48
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -