Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12d02f
         (619 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   3.6  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   3.6  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   3.6  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    22   4.7  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   4.7  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   4.7  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 358 HCDMENEEPENLSTKPEDLS 417
           H +   +EPENLS K   ++
Sbjct: 22  HSENMQDEPENLSNKSNSIT 41


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +1

Query: 367 MENEEPENLSTKPEDLSKTGNYPSKASSPVSA 462
           M N+   N    P+D  +       A+SP SA
Sbjct: 1   MRNDHGSNTHLHPDDAIRRAKIVKVAASPTSA 32


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +1

Query: 367 MENEEPENLSTKPEDLSKTGNYPSKASSPVSA 462
           M N+   N    P+D  +       A+SP SA
Sbjct: 1   MRNDHGSNTHLHPDDAIRRAKIVKVAASPTSA 32


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 229 LAKNYAHCPLKKRP 270
           L +NY +C L+K+P
Sbjct: 41  LTENYVNCLLEKKP 54


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 541 PAPTELARPTPQYPYM 588
           P  T  A P+P YP+M
Sbjct: 221 PGNTAAALPSPLYPWM 236


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 541 PAPTELARPTPQYPYM 588
           P  T  A P+P YP+M
Sbjct: 223 PGNTAAALPSPLYPWM 238


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,153
Number of Sequences: 336
Number of extensions: 2429
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)