BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12d02f
(619 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y00288-1|CAA68397.1| 390|Drosophila melanogaster protein ( Dros... 33 0.23
BT010255-1|AAQ23573.1| 390|Drosophila melanogaster RE35237p pro... 33 0.23
AJ251486-1|CAB62556.1| 390|Drosophila melanogaster snail protein. 33 0.23
AE014134-2603|AAF53463.1| 390|Drosophila melanogaster CG3956-PA... 33 0.23
AE014297-715|ABI31146.1| 563|Drosophila melanogaster CG7549-PC,... 32 0.71
M83207-1|AAA28513.1| 470|Drosophila melanogaster escargot-encod... 30 2.2
DQ017421-1|AAY82203.1| 25|Drosophila melanogaster CG3758 protein. 30 2.2
DQ017420-1|AAY82202.1| 25|Drosophila melanogaster CG3758 protein. 30 2.2
AY071590-1|AAL49212.1| 470|Drosophila melanogaster RE64266p pro... 30 2.2
AE014134-2597|AAF53458.1| 470|Drosophila melanogaster CG3758-PA... 30 2.2
AY089574-1|AAL90312.1| 548|Drosophila melanogaster RE10012p pro... 30 2.9
AF118857-1|AAF12733.1| 548|Drosophila melanogaster zinc finger ... 30 2.9
AE014298-1829|AAN09643.1| 381|Drosophila melanogaster CG32642-P... 30 2.9
AE014134-2601|AAF53461.1| 548|Drosophila melanogaster CG4158-PA... 30 2.9
AE014298-448|AAF45811.2| 626|Drosophila melanogaster CG2681-PA ... 29 3.8
AE014296-1672|AAF50256.3| 2351|Drosophila melanogaster CG3654-PD... 29 3.8
AE014296-1467|AAF50407.1| 681|Drosophila melanogaster CG6765-PA... 29 3.8
AY071538-1|AAL49160.1| 309|Drosophila melanogaster RE57705p pro... 29 5.0
AF132189-1|AAD34777.1| 420|Drosophila melanogaster unknown prot... 29 5.0
AE014297-1650|AAF54924.2| 309|Drosophila melanogaster CG8458-PA... 29 5.0
AE013599-728|AAG22298.1| 420|Drosophila melanogaster CG8262-PA ... 29 5.0
AY119500-1|AAM50154.1| 340|Drosophila melanogaster GH11174p pro... 29 6.6
AY051924-1|AAK93348.1| 678|Drosophila melanogaster LD40883p pro... 29 6.6
AE014297-3733|AAF56411.2| 678|Drosophila melanogaster CG11849-P... 29 6.6
AE014296-1028|AAF50733.2| 340|Drosophila melanogaster CG32412-P... 29 6.6
AY094730-1|AAM11083.1| 1372|Drosophila melanogaster GH25780p pro... 28 8.8
AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p pro... 28 8.8
AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA... 28 8.8
AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB... 28 8.8
AE014297-134|AAO41500.1| 1372|Drosophila melanogaster CG31531-PC... 28 8.8
AE014297-133|AAF52105.2| 1372|Drosophila melanogaster CG31531-PB... 28 8.8
AE014297-132|AAF52104.2| 1372|Drosophila melanogaster CG31531-PA... 28 8.8
>Y00288-1|CAA68397.1| 390|Drosophila melanogaster protein (
Drosophila melanogastersnail protein (sna gene). ).
Length = 390
Score = 33.5 bits (73), Expect = 0.23
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 229 LAKNYAHCPLKKRPVLVREER 291
+A NY CPLKKRP++ EER
Sbjct: 1 MAANYKSCPLKKRPIVFVEER 21
>BT010255-1|AAQ23573.1| 390|Drosophila melanogaster RE35237p
protein.
Length = 390
Score = 33.5 bits (73), Expect = 0.23
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 229 LAKNYAHCPLKKRPVLVREER 291
+A NY CPLKKRP++ EER
Sbjct: 1 MAANYKSCPLKKRPIVFVEER 21
>AJ251486-1|CAB62556.1| 390|Drosophila melanogaster snail protein.
Length = 390
Score = 33.5 bits (73), Expect = 0.23
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 229 LAKNYAHCPLKKRPVLVREER 291
+A NY CPLKKRP++ EER
Sbjct: 1 MAANYKSCPLKKRPIVFVEER 21
>AE014134-2603|AAF53463.1| 390|Drosophila melanogaster CG3956-PA
protein.
Length = 390
Score = 33.5 bits (73), Expect = 0.23
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 229 LAKNYAHCPLKKRPVLVREER 291
+A NY CPLKKRP++ EER
Sbjct: 1 MAANYKSCPLKKRPIVFVEER 21
>AE014297-715|ABI31146.1| 563|Drosophila melanogaster CG7549-PC,
isoform C protein.
Length = 563
Score = 31.9 bits (69), Expect = 0.71
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 34 CASRVPNTNTSLIIRCNFAMFGLFRIRNL 120
C + V +++ I+ CNF GLFR+RNL
Sbjct: 25 CGTCVLSSDFGFILDCNFKKSGLFRVRNL 53
>M83207-1|AAA28513.1| 470|Drosophila melanogaster escargot-encoded
protein protein.
Length = 470
Score = 30.3 bits (65), Expect = 2.2
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 226 VLAKNYAHCPLKKRPV 273
++ KNY+ CPLKKRPV
Sbjct: 8 LVEKNYSKCPLKKRPV 23
>DQ017421-1|AAY82203.1| 25|Drosophila melanogaster CG3758 protein.
Length = 25
Score = 30.3 bits (65), Expect = 2.2
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 226 VLAKNYAHCPLKKRPV 273
++ KNY+ CPLKKRPV
Sbjct: 8 LVEKNYSKCPLKKRPV 23
>DQ017420-1|AAY82202.1| 25|Drosophila melanogaster CG3758 protein.
Length = 25
Score = 30.3 bits (65), Expect = 2.2
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 226 VLAKNYAHCPLKKRPV 273
++ KNY+ CPLKKRPV
Sbjct: 8 LVEKNYSKCPLKKRPV 23
>AY071590-1|AAL49212.1| 470|Drosophila melanogaster RE64266p
protein.
Length = 470
Score = 30.3 bits (65), Expect = 2.2
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 226 VLAKNYAHCPLKKRPV 273
++ KNY+ CPLKKRPV
Sbjct: 8 LVEKNYSKCPLKKRPV 23
>AE014134-2597|AAF53458.1| 470|Drosophila melanogaster CG3758-PA
protein.
Length = 470
Score = 30.3 bits (65), Expect = 2.2
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 226 VLAKNYAHCPLKKRPV 273
++ KNY+ CPLKKRPV
Sbjct: 8 LVEKNYSKCPLKKRPV 23
>AY089574-1|AAL90312.1| 548|Drosophila melanogaster RE10012p
protein.
Length = 548
Score = 29.9 bits (64), Expect = 2.9
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 241 YAHCPLKKRPVLVRE 285
Y+ CPLKKRP++V E
Sbjct: 6 YSRCPLKKRPIMVEE 20
>AF118857-1|AAF12733.1| 548|Drosophila melanogaster zinc finger
protein Worniu protein.
Length = 548
Score = 29.9 bits (64), Expect = 2.9
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 241 YAHCPLKKRPVLVRE 285
Y+ CPLKKRP++V E
Sbjct: 6 YSRCPLKKRPIMVEE 20
>AE014298-1829|AAN09643.1| 381|Drosophila melanogaster CG32642-PC
protein.
Length = 381
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/57 (33%), Positives = 23/57 (40%)
Frame = +1
Query: 442 ASSPVSAMTVKVEPREWSHQLPDYMSACRTRLEPAPTELARPTPQYPYMPTLYSPYA 612
AS P A V P + P Y + AP A P P+YP P+ Y YA
Sbjct: 143 ASGPYGAKAVAEAPGPYPVASPSYSVS----YPAAPAAYAPPPPKYPSPPSSYPVYA 195
>AE014134-2601|AAF53461.1| 548|Drosophila melanogaster CG4158-PA
protein.
Length = 548
Score = 29.9 bits (64), Expect = 2.9
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 241 YAHCPLKKRPVLVRE 285
Y+ CPLKKRP++V E
Sbjct: 6 YSRCPLKKRPIMVEE 20
>AE014298-448|AAF45811.2| 626|Drosophila melanogaster CG2681-PA
protein.
Length = 626
Score = 29.5 bits (63), Expect = 3.8
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Frame = +1
Query: 340 RLYYDYHCDMENEEPENLST-KPEDLSKTGNYPSKASSPVSAMTVKVEPREWSHQLPDYM 516
R++ + + E E N ST + EDL K KA + K+ P E + + PD +
Sbjct: 30 RIFLNSTINEEVPEATNGSTVREEDLEKN----LKAID--EPQSTKMPPEEVAKKTPDEV 83
Query: 517 SACRTRLEPAPTELARPTPQYPYMPTLYSPYA 612
A + EP E A+P P P TL YA
Sbjct: 84 PAQEQQKEPEKVEPAKPVP--PNTLTLNVKYA 113
>AE014296-1672|AAF50256.3| 2351|Drosophila melanogaster CG3654-PD
protein.
Length = 2351
Score = 29.5 bits (63), Expect = 3.8
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Frame = +1
Query: 358 HCDMENEEPENLSTKPEDLSKTGNYPSKASS-----PVSAMTVKVEPREWSHQLPDYMSA 522
H ++++E E+ E+L++T K+ S P++ V +E LP M++
Sbjct: 777 HSKVDSDEEEDFLIN-EELNETKRKLEKSFSDSDDEPLAIKVPAVAVKE-KELLPPKMAS 834
Query: 523 CRTRLEPAPTELARPTPQYPYMPTLYSP 606
+L P P+ ++ PTP P+L P
Sbjct: 835 PPPKLVPVPSPISVPTPAVSVAPSLAVP 862
>AE014296-1467|AAF50407.1| 681|Drosophila melanogaster CG6765-PA
protein.
Length = 681
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 427 NYPSKASSPVSAMTVKVEPREWSHQLPDYMSAC-RTRLEPAPTELARP 567
++P P + +T+K EP +WS+ P+ SA LE P LA P
Sbjct: 413 SHPPTLRHPHNFLTIKQEPTDWSNNPPNASSASNNNNLEELP--LASP 458
>AY071538-1|AAL49160.1| 309|Drosophila melanogaster RE57705p
protein.
Length = 309
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 612 CVGRIQCRHVRVLRRRSCKLCW 547
C R++ +HVR RR +CKL W
Sbjct: 269 CGYRVRSQHVRTERRCNCKLVW 290
>AF132189-1|AAD34777.1| 420|Drosophila melanogaster unknown
protein.
Length = 420
Score = 29.1 bits (62), Expect = 5.0
Identities = 25/84 (29%), Positives = 36/84 (42%)
Frame = +1
Query: 361 CDMENEEPENLSTKPEDLSKTGNYPSKASSPVSAMTVKVEPREWSHQLPDYMSACRTRLE 540
C+M E+ + KPE +SK S + +T R S + DY++ E
Sbjct: 218 CEMILEQQQR--AKPEAISKAS---STTGTQCDILTTNQAGRRLSPIMQDYIAE---EEE 269
Query: 541 PAPTELARPTPQYPYMPTLYSPYA 612
P P AR PQ+P P + P A
Sbjct: 270 PLPPPQARVIPQFP-SPRPHPPIA 292
>AE014297-1650|AAF54924.2| 309|Drosophila melanogaster CG8458-PA
protein.
Length = 309
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 612 CVGRIQCRHVRVLRRRSCKLCW 547
C R++ +HVR RR +CKL W
Sbjct: 269 CGYRVRSQHVRTERRCNCKLVW 290
>AE013599-728|AAG22298.1| 420|Drosophila melanogaster CG8262-PA
protein.
Length = 420
Score = 29.1 bits (62), Expect = 5.0
Identities = 25/84 (29%), Positives = 36/84 (42%)
Frame = +1
Query: 361 CDMENEEPENLSTKPEDLSKTGNYPSKASSPVSAMTVKVEPREWSHQLPDYMSACRTRLE 540
C+M E+ + KPE +SK S + +T R S + DY++ E
Sbjct: 218 CEMILEQQQR--AKPEAISKAS---STTGTQCDILTTNQAGRRLSPIMQDYIAE---EEE 269
Query: 541 PAPTELARPTPQYPYMPTLYSPYA 612
P P AR PQ+P P + P A
Sbjct: 270 PLPPPQARVIPQFP-SPRPHPPIA 292
>AY119500-1|AAM50154.1| 340|Drosophila melanogaster GH11174p
protein.
Length = 340
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 90 DVWTFPYSKSVTLCFEI*VNLRRLFRNIVFVYLVKN 197
DVW P + L + N R+FRN V+ YL ++
Sbjct: 294 DVWHTPRDNAANLHWPSIRNFNRVFRNFVYQYLKRH 329
>AY051924-1|AAK93348.1| 678|Drosophila melanogaster LD40883p
protein.
Length = 678
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 364 DMENEEPENLSTKPEDLSKTGNYPSKASSPVS 459
D++ E S KPEDLS G + + SP++
Sbjct: 471 DLDGEVEPEASGKPEDLSAAGKVMTPSQSPIA 502
>AE014297-3733|AAF56411.2| 678|Drosophila melanogaster CG11849-PA
protein.
Length = 678
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 364 DMENEEPENLSTKPEDLSKTGNYPSKASSPVS 459
D++ E S KPEDLS G + + SP++
Sbjct: 471 DLDGEVEPEASGKPEDLSAAGKVMTPSQSPIA 502
>AE014296-1028|AAF50733.2| 340|Drosophila melanogaster CG32412-PA
protein.
Length = 340
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 90 DVWTFPYSKSVTLCFEI*VNLRRLFRNIVFVYLVKN 197
DVW P + L + N R+FRN V+ YL ++
Sbjct: 294 DVWHTPRDNAANLHWPSIRNFNRVFRNFVYQYLKRH 329
>AY094730-1|AAM11083.1| 1372|Drosophila melanogaster GH25780p
protein.
Length = 1372
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 400 KPEDLSKTGNYPSKASSPVSAM--TVKVEPREWSHQLPDYMSACRTRLE 540
KP +L +T K + V + K EP EW + L ++ S+ R R+E
Sbjct: 72 KPCNLYQTAQEQLKKAEEVKKLKEVKKEEPEEWQNNLDNWKSSRRKRVE 120
>AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p protein.
Length = 1458
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 352 DYHCDMENEEPENLSTKPEDLSKTGNYPSKASSPVSAM-TVKVEPREWSHQ 501
D H + ++ N S KP+++S+ G S P +A+ T+K + ++ S Q
Sbjct: 1326 DIHHHQQQQQQLNSSAKPDEMSRLGAGNSGLDKPAAAVATLKRKQKQNSKQ 1376
>AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA,
isoform A protein.
Length = 1458
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 352 DYHCDMENEEPENLSTKPEDLSKTGNYPSKASSPVSAM-TVKVEPREWSHQ 501
D H + ++ N S KP+++S+ G S P +A+ T+K + ++ S Q
Sbjct: 1326 DIHHHQQQQQQLNSSAKPDEMSRLGAGNSGLDKPAAAVATLKRKQKQNSKQ 1376
>AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB,
isoform B protein.
Length = 1740
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 352 DYHCDMENEEPENLSTKPEDLSKTGNYPSKASSPVSAM-TVKVEPREWSHQ 501
D H + ++ N S KP+++S+ G S P +A+ T+K + ++ S Q
Sbjct: 1608 DIHHHQQQQQQLNSSAKPDEMSRLGAGNSGLDKPAAAVATLKRKQKQNSKQ 1658
>AE014297-134|AAO41500.1| 1372|Drosophila melanogaster CG31531-PC,
isoform C protein.
Length = 1372
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 400 KPEDLSKTGNYPSKASSPVSAM--TVKVEPREWSHQLPDYMSACRTRLE 540
KP +L +T K + V + K EP EW + L ++ S+ R R+E
Sbjct: 72 KPCNLYQTAQEQLKKAEEVKKLKEVKKEEPEEWQNNLDNWKSSRRKRVE 120
>AE014297-133|AAF52105.2| 1372|Drosophila melanogaster CG31531-PB,
isoform B protein.
Length = 1372
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 400 KPEDLSKTGNYPSKASSPVSAM--TVKVEPREWSHQLPDYMSACRTRLE 540
KP +L +T K + V + K EP EW + L ++ S+ R R+E
Sbjct: 72 KPCNLYQTAQEQLKKAEEVKKLKEVKKEEPEEWQNNLDNWKSSRRKRVE 120
>AE014297-132|AAF52104.2| 1372|Drosophila melanogaster CG31531-PA,
isoform A protein.
Length = 1372
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 400 KPEDLSKTGNYPSKASSPVSAM--TVKVEPREWSHQLPDYMSACRTRLE 540
KP +L +T K + V + K EP EW + L ++ S+ R R+E
Sbjct: 72 KPCNLYQTAQEQLKKAEEVKKLKEVKKEEPEEWQNNLDNWKSSRRKRVE 120
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,622,199
Number of Sequences: 53049
Number of extensions: 470336
Number of successful extensions: 1558
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1550
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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