Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12c24r
         (744 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    24   1.3  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           24   1.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           24   1.3  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   4.0  
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    22   7.0  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 324 IQWTPGNPTIVTIIALS 274
           I+W  GNP  +T+I LS
Sbjct: 193 IEWFGGNPKRITLIGLS 209


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 324 IQWTPGNPTIVTIIALS 274
           I+W  GNP  +T+I LS
Sbjct: 64  IEWFGGNPKRITLIGLS 80


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 324 IQWTPGNPTIVTIIALS 274
           I+W  GNP  +T+I LS
Sbjct: 193 IEWFGGNPKRITLIGLS 209


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +3

Query: 447 EWQFYMRDEMSYF 485
           EW  Y RDE  YF
Sbjct: 544 EWPSYSRDEPKYF 556


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -1

Query: 249 ILITQEPVTPLSRVHCKC 196
           ILIT   VTP   + C C
Sbjct: 15  ILITSYFVTPTMSIKCNC 32


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,917
Number of Sequences: 438
Number of extensions: 4731
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)