Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12c24f
         (584 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    25   1.8  
AY341209-1|AAR13773.1|  196|Anopheles gambiae SP14D1 protein.          23   5.5  
AY341208-1|AAR13772.1|  196|Anopheles gambiae SP14D1 protein.          23   5.5  
AY341207-1|AAR13771.1|  196|Anopheles gambiae SP14D1 protein.          23   5.5  
AY341206-1|AAR13770.1|  196|Anopheles gambiae SP14D1 protein.          23   5.5  
AF007166-1|AAB62929.1|  360|Anopheles gambiae serine protease 14...    23   5.5  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   7.3  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 339  IEKLCNFHYQGFIDSIRELLQVRSHAEELHAE 434
            IE + N     F+ ++R  +  R H  ELH++
Sbjct: 1462 IELVSNLTSSAFLAALRRFVARRGHVTELHSD 1493


>AY341209-1|AAR13773.1|  196|Anopheles gambiae SP14D1 protein.
          Length = 196

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +3

Query: 396 LQVRSHAEELHAEISNVDANVKETTEALCIRADELIRARR 515
           LQ +SH  ++     N + N   T  A+C+     +R R+
Sbjct: 41  LQDKSHHNDIALIRFNREINYSSTIRAICLPLSNSLRNRK 80


>AY341208-1|AAR13772.1|  196|Anopheles gambiae SP14D1 protein.
          Length = 196

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +3

Query: 396 LQVRSHAEELHAEISNVDANVKETTEALCIRADELIRARR 515
           LQ +SH  ++     N + N   T  A+C+     +R R+
Sbjct: 41  LQDKSHHNDIALIRFNREINYSSTIRAICLPLSNSLRNRK 80


>AY341207-1|AAR13771.1|  196|Anopheles gambiae SP14D1 protein.
          Length = 196

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +3

Query: 396 LQVRSHAEELHAEISNVDANVKETTEALCIRADELIRARR 515
           LQ +SH  ++     N + N   T  A+C+     +R R+
Sbjct: 41  LQDKSHHNDIALIRFNREINYSSTIRAICLPLSNSLRNRK 80


>AY341206-1|AAR13770.1|  196|Anopheles gambiae SP14D1 protein.
          Length = 196

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +3

Query: 396 LQVRSHAEELHAEISNVDANVKETTEALCIRADELIRARR 515
           LQ +SH  ++     N + N   T  A+C+     +R R+
Sbjct: 41  LQDKSHHNDIALIRFNREINYSSTISAICLPLSNSLRNRK 80


>AF007166-1|AAB62929.1|  360|Anopheles gambiae serine protease 14D
           protein.
          Length = 360

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +3

Query: 396 LQVRSHAEELHAEISNVDANVKETTEALCIRADELIRARR 515
           LQ +SH  ++     N + N   T  A+C+     +R R+
Sbjct: 205 LQDKSHHNDIALIRFNREINYSSTIRAICLPLSNSLRNRK 244


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 14/52 (26%), Positives = 22/52 (42%)
 Frame = +3

Query: 291 AFVQQLDDRIKQHDKEIEKLCNFHYQGFIDSIRELLQVRSHAEELHAEISNV 446
           A V+Q  DRI + +    + CN  + G+   I            LH EI ++
Sbjct: 72  AVVRQFKDRIAEGEGLFYQYCNLVFGGWDFCIHNQKSADIKHRALHNEIKSL 123


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 536,801
Number of Sequences: 2352
Number of extensions: 9798
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)