Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12c22r
         (746 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IKR4 Cluster: Putative uncharacterized protein; n=1; ...    40   0.049
UniRef50_Q7RM15 Cluster: Putative uncharacterized protein PY0237...    36   1.4  
UniRef50_A5BLH5 Cluster: Putative uncharacterized protein; n=1; ...    33   9.9  

>UniRef50_Q8IKR4 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 2391

 Score = 40.3 bits (90), Expect = 0.049
 Identities = 19/59 (32%), Positives = 33/59 (55%)
 Frame = -2

Query: 178  IQMCLYVVKNFSRYVYLLDENKTIF*ITLDILVLCLDDIFVALIVTHYIYSLYTSTVYF 2
            I +CLY++K     +Y  DE+  +   +  +L+LC+D I++  I  +YIY L     +F
Sbjct: 1525 IHLCLYIIKAKVNSIYYYDEDVVLHTPSSRLLLLCIDQIYI--IYENYIYHLCKKRYFF 1581


>UniRef50_Q7RM15 Cluster: Putative uncharacterized protein PY02373;
            n=9; cellular organisms|Rep: Putative uncharacterized
            protein PY02373 - Plasmodium yoelii yoelii
          Length = 2240

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = -2

Query: 178  IQMCLYVVKNFSRYVYLLDENKTIF*I-TLDILVLCLDDIFVALIVTHYIYSLYTSTVYF 2
            I++C Y++K     +Y  D+  T+    +  +++LC+D I++  I  +YIY L     +F
Sbjct: 1425 IEICFYIIKTKINSIYYYDDENTLPNTPSSRLILLCIDQIYI--IYENYIYHLCKKRYFF 1482


>UniRef50_A5BLH5 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 466

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
 Frame = -1

Query: 317 YWNRICLFLSLNNDRGFVLPILLI*TTQLCISMNSRV--PNSLDR--YHTDPNVFV 162
           +W+R  +  S ++ R F+LPI  +    LC +M  RV  P+S  R   HT P++FV
Sbjct: 184 FWDRTYINQS-SSYRSFILPIRSVRRPGLCFTMTFRVTFPDSAFRAIVHTHPDIFV 238


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,314,106
Number of Sequences: 1657284
Number of extensions: 12052925
Number of successful extensions: 25591
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25589
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61323318355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)