Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12c21f
(364 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 23 1.3
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 22 1.7
AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory recept... 22 1.7
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 22 1.7
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 21 2.9
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 21 3.9
AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory recept... 21 3.9
AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory recept... 21 3.9
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 5.1
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 5.1
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 20 9.0
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 22.6 bits (46), Expect = 1.3
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +2
Query: 122 IRC*CFSTRRDGGCGGRNISLYLVARKEGSPTARSSRRESA 244
+ C +S R G R + K+G+PTA R +A
Sbjct: 194 VYCTRYSDRPSSGRSPRTRRVKKPGAKQGAPTAEEKRPRTA 234
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 22.2 bits (45), Expect = 1.7
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 190 QVKRNVPTATTAIAPSAK 137
QVKRNVP T P A+
Sbjct: 201 QVKRNVPKPTVPKIPPAE 218
>AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory receptor
candidate 57 protein.
Length = 387
Score = 22.2 bits (45), Expect = 1.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 311 CTRKYYFANKIIFPLHYVLLL 249
C++K + N IF L+ VLLL
Sbjct: 108 CSKKSFRMNFAIFNLYMVLLL 128
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 22.2 bits (45), Expect = 1.7
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 190 QVKRNVPTATTAIAPSAK 137
QVKRNVP T P A+
Sbjct: 201 QVKRNVPKPTVPKIPPAE 218
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 21.4 bits (43), Expect = 2.9
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -2
Query: 219 AVGEPSFLATK*REMFRPPQPPS 151
+V EP+ T E RPP PS
Sbjct: 398 SVPEPTISTTPRPEWARPPSTPS 420
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 21.0 bits (42), Expect = 3.9
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 276 FSAALCSATIFADSRLE 226
F A+C+ T+FA + E
Sbjct: 9 FILAICACTVFAQQQAE 25
>AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory receptor
candidate 44 protein.
Length = 313
Score = 21.0 bits (42), Expect = 3.9
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -1
Query: 364 FFFSMIYNIILLDSKHKRVHVSIILRTKLFF 272
F+F NII K +H ++I+R F
Sbjct: 247 FYFFTTGNIIATYDKQFYIHNALIVRALFLF 277
>AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory receptor
candidate 4 protein.
Length = 309
Score = 21.0 bits (42), Expect = 3.9
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -1
Query: 364 FFFSMIYNIILLDSKHKRVHVSIILRTKLFF 272
F+F NII K +H ++I+R F
Sbjct: 243 FYFFTTGNIIATYDKQFYIHNALIVRALFLF 273
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 20.6 bits (41), Expect = 5.1
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -3
Query: 302 KYYFANKIIFPLHYVLLLSSPIRALSSVRWG 210
KY + P Y+LL+ + +++V WG
Sbjct: 1003 KYGVIYYVTVPSMYLLLVIYSVFNMNNVSWG 1033
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
protein.
Length = 1464
Score = 20.6 bits (41), Expect = 5.1
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -3
Query: 302 KYYFANKIIFPLHYVLLLSSPIRALSSVRWG 210
KY + P Y+LL+ + +++V WG
Sbjct: 1003 KYGVIYYVTVPSMYLLLVIYSVFNMNNVSWG 1033
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 19.8 bits (39), Expect = 9.0
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 190 QVKRNVPTAT 161
QVKRNVP T
Sbjct: 201 QVKRNVPKPT 210
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,836
Number of Sequences: 336
Number of extensions: 1778
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used: 7404950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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