Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12c20f
         (371 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   1.0  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   1.3  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    22   2.3  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   2.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   9.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   9.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   9.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   9.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   9.4  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    20   9.4  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 34  YXIKLKNNCF*QIS*SXKCSDCPLEK 111
           Y  K  NNC   +    KC +C L+K
Sbjct: 222 YQCKYGNNCEIDMYMRRKCQECRLKK 247


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 53  IIVSSKLVNRXNVQIALWRKSRSDGRKTSS 142
           II    ++    V +ALW + R  GRK  S
Sbjct: 44  IIFLVTVIGNSTVLLALWTRRRYAGRKKLS 73


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -1

Query: 236 LKTTMFQYQGSDSYNCTHYSKRYYAI 159
           LKT M  + G   Y C H  +++  +
Sbjct: 25  LKTHMRLHTGERPYRCEHCDRQFVQV 50


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -1

Query: 236 LKTTMFQYQGSDSYNCTHYSKRYYAI 159
           LKT M  + G   Y C H  +++  +
Sbjct: 178 LKTHMRLHTGERPYRCEHCDRQFVQV 203


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -1

Query: 185  HYSKRYYAIDSVLACLTFFF 126
            H SK Y  ++ +     FFF
Sbjct: 1315 HISKEYLQLEPIGLVFVFFF 1334


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -1

Query: 185  HYSKRYYAIDSVLACLTFFF 126
            H SK Y  ++ +     FFF
Sbjct: 1315 HISKEYLQLEPIGLVFVFFF 1334


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -1

Query: 185  HYSKRYYAIDSVLACLTFFF 126
            H SK Y  ++ +     FFF
Sbjct: 1315 HISKEYLQLEPIGLVFVFFF 1334


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -1

Query: 185  HYSKRYYAIDSVLACLTFFF 126
            H SK Y  ++ +     FFF
Sbjct: 1315 HISKEYLQLEPIGLVFVFFF 1334


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 5/22 (22%), Positives = 13/22 (59%)
 Frame = -1

Query: 170 YYAIDSVLACLTFFFHRIYSFS 105
           +Y +  +L C+ +F++    F+
Sbjct: 228 FYCVLIILLCIYYFYYAFILFT 249


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 59  VSSKLVNRXNVQIALWRKSRSD 124
           VSS++ N     +  WR  R D
Sbjct: 321 VSSEIYNVEYKNVEFWRNIRED 342


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,840
Number of Sequences: 336
Number of extensions: 1052
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7722305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)