Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12c18r
         (689 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    28   0.32 
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    25   1.7  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              24   3.9  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   3.9  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   6.9  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   6.9  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   6.9  
AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1 prot...    23   9.1  
AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A prot...    23   9.1  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 27.9 bits (59), Expect = 0.32
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -3

Query: 480 QAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQ-QSIL 331
           Q  +Q+   RPQ  RP + +    R  QR+  +  L+EV P  G+  +S+L
Sbjct: 463 QQPQQQQQQRPQQQRPQQQRPQQQRSQQRKPAKPELIEVSPNEGQDWESLL 513



 Score = 24.2 bits (50), Expect = 3.9
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = -3

Query: 480 QAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQQSILQDHVHRRQ 307
           Q  +Q+   R Q  R  + QQ      QRQ QQ+   +   +  +QQ   Q   H++Q
Sbjct: 313 QQQQQQQQQRQQQQRQQQRQQQ-----QRQQQQQQQQQQRQQQQRQQQQQQQQQHQQQ 365


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
 Frame = +2

Query: 578 WCSSCRFS-----IRRFTASLITSPFFSFRYSEHLAIAV 679
           WC + RF+     +RRF   ++     SFR + H A+ V
Sbjct: 773 WCHTLRFANRRQWLRRFYRPVVQRVISSFRTTSHDAVCV 811


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 18/62 (29%), Positives = 26/62 (41%)
 Frame = -3

Query: 480 QAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQQSILQDHVHRRQTV 301
           Q  +Q+   R Q  +    QQN     QRQ QQ+       +  +QQ +    V RRQ  
Sbjct: 263 QQQQQQHQQREQQQQQRVQQQNQQH--QRQQQQQQQQRQQQQQQEQQELWTTVVRRRQNT 320

Query: 300 PE 295
            +
Sbjct: 321 QQ 322


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -1

Query: 326  IMSTEDKQYLKLDNTKGSSDDRIXYGDSTADTFKHHWYLEPSMYESDV 183
            +M+ +D     +D T G SDD    GD T     +     PS+ ES +
Sbjct: 971  VMAGDDMMMESVDLTIGGSDDGSFAGDKTHSASPNR-LESPSLNESSL 1017


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 326  IMSTEDKQYLKLDNTKGSSDDRIXYGDST 240
            +M+ +D     +D T G SDD    GD T
Sbjct: 969  VMAGDDMMMESVDLTIGGSDDGSFAGDKT 997


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +2

Query: 578 WCSSCRFSIRRFTASLITSPFFSFRYSEHLAIA 676
           WC      ++R  A  +TS F S  Y   +A+A
Sbjct: 809 WCQRKLAQVQRPLARGVTSSFVSVAYETGVALA 841


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
 Frame = -3

Query: 618 AVKRLIEXRQEEHHGLRLPVMDKG-----WKGNRQILLPHP 511
           AVK  IE   EE   L    + +G     WK  R +LLP P
Sbjct: 515 AVKVAIEEYTEEFCRLYQDCLSRGTFPPQWKRQRLVLLPKP 555


>AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1
           protein.
          Length = 153

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 406 VTPKTKPARKSPGSLPP 356
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPASKPSPNCPP 97


>AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 406 VTPKTKPARKSPGSLPP 356
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPASKPSPNCPP 97


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 723,376
Number of Sequences: 2352
Number of extensions: 15728
Number of successful extensions: 54
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)