Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12c18r
(689 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY864367-1|AAX38005.1| 574|Drosophila melanogaster scavenger re... 32 0.64
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro... 31 1.9
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC... 31 1.9
AY089239-1|AAL89977.1| 319|Drosophila melanogaster AT02809p pro... 29 4.5
AE014296-955|AAF50778.2| 1175|Drosophila melanogaster CG4835-PA ... 29 4.5
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ... 29 4.5
AE014134-371|AAN10418.1| 319|Drosophila melanogaster CG31682-PA... 29 4.5
AY118563-1|AAM49932.1| 917|Drosophila melanogaster LD39904p pro... 29 6.0
AE014298-611|AAF45929.2| 483|Drosophila melanogaster CG32774-PA... 29 6.0
AE014297-3722|AAF56402.1| 917|Drosophila melanogaster CG31108-P... 29 6.0
AY089514-1|AAL90252.1| 709|Drosophila melanogaster GH23026p pro... 29 7.9
AE014297-807|AAS65127.1| 709|Drosophila melanogaster CG9801-PC,... 29 7.9
AE014297-806|AAF54283.1| 709|Drosophila melanogaster CG9801-PB,... 29 7.9
AE014297-805|AAF54282.1| 709|Drosophila melanogaster CG9801-PA,... 29 7.9
>AY864367-1|AAX38005.1| 574|Drosophila melanogaster scavenger
receptor protein.
Length = 574
Score = 32.3 bits (70), Expect = 0.64
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -2
Query: 346 TTEYTSRSCPPKTNST*SSITRKVLVMTVSXTVIAPLTPSNTTGT 212
TTE S PP ST +S TRK T + T T ++TT T
Sbjct: 331 TTEDDISSVPPTVTSTSTSTTRKSTTTTTTTTTTTTTTSTSTTTT 375
>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
Length = 16215
Score = 30.7 bits (66), Expect = 1.9
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = -2
Query: 409 SVTPKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSXTVIAPLTP 230
S+ + KP + P S+ P + T PKT T + + TV T I LTP
Sbjct: 12694 SIPEEPKPDKSQPISVLPDTTKPKKTKTPKTPKTEDTDQQVPDEPTETTVDTTDIPELTP 12753
Query: 229 SNT 221
+ T
Sbjct: 12754 TQT 12756
>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
isoform C protein.
Length = 18074
Score = 30.7 bits (66), Expect = 1.9
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = -2
Query: 409 SVTPKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSXTVIAPLTP 230
S+ + KP + P S+ P + T PKT T + + TV T I LTP
Sbjct: 14553 SIPEEPKPDKSQPISVLPDTTKPKKTKTPKTPKTEDTDQQVPDEPTETTVDTTDIPELTP 14612
Query: 229 SNT 221
+ T
Sbjct: 14613 TQT 14615
>AY089239-1|AAL89977.1| 319|Drosophila melanogaster AT02809p
protein.
Length = 319
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 325 ILKYTLLFSNTGVNFQETFLLVLSLESPNAILLWFCWSINL 447
I+KY +N + ETF V S + N+ +LW C ++L
Sbjct: 80 IMKYGFPSTND-ITINETFDFVTSFDRRNSAILWMCERVDL 119
>AE014296-955|AAF50778.2| 1175|Drosophila melanogaster CG4835-PA
protein.
Length = 1175
Score = 29.5 bits (63), Expect = 4.5
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = -2
Query: 409 SVTPKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSXTV-IAPLT 233
S T T + + P TTE T+ S PKT +T S+ T S T+ P T
Sbjct: 1015 STTIPTTTTESTTATTTPQTTTTESTTISTTPKTTTTESTTVSTTPTTTESTTISTTPTT 1074
Query: 232 PSNTT 218
TT
Sbjct: 1075 TEPTT 1079
>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
protein.
Length = 1286
Score = 29.5 bits (63), Expect = 4.5
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = -2
Query: 400 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST*SSITRKVLVMTV-SXTVIAPLTPSN 224
P T P+ P + P TT TSR ST ++ TR+ T S T + P+
Sbjct: 370 PTTTPSTSRPTTTTPRSTTTTSTSRPTTTTPRSTTTTTTRRPTTTTPRSTTTTSTSRPTT 429
Query: 223 TT 218
TT
Sbjct: 430 TT 431
>AE014134-371|AAN10418.1| 319|Drosophila melanogaster CG31682-PA
protein.
Length = 319
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 325 ILKYTLLFSNTGVNFQETFLLVLSLESPNAILLWFCWSINL 447
I+KY +N + ETF V S + N+ +LW C ++L
Sbjct: 80 IMKYGFPSTND-ITINETFDFVTSFDRRNSAILWMCERVDL 119
>AY118563-1|AAM49932.1| 917|Drosophila melanogaster LD39904p protein.
Length = 917
Score = 29.1 bits (62), Expect = 6.0
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Frame = +3
Query: 201 GGLKVPVVFEGVSGAITVXDTVITRTFRVIELQVLFVFG-GHDLEVYSVVFQHGGKLPGD 377
G +K PV+F + T+ R+ V +L F+ D E Y F H G +P
Sbjct: 775 GSVKPPVMFRNMQ---TIKVASKARSAMVAKLLGDFLENYKRDTEAYVDSFDHFGMIPSS 831
Query: 378 FLAGFVFGVTECNFVVVL-LVDQLEGVMVPFVY 473
F+ E + VL L + G+M PF+Y
Sbjct: 832 AYNQFLMHAQESDLEAVLTLHTNVTGIM-PFLY 863
>AE014298-611|AAF45929.2| 483|Drosophila melanogaster CG32774-PA
protein.
Length = 483
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/68 (29%), Positives = 26/68 (38%)
Frame = -2
Query: 415 LHSVTPKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSXTVIAPL 236
L T T + + + P TT+ TS + P T + S T V T S
Sbjct: 218 LQPTTSTTPQSTSTTSTQAPTTTTTQSTSTATQPSTTTPQSPPTTTTQVSTTSTQPTTTT 277
Query: 235 TPSNTTGT 212
TP TT T
Sbjct: 278 TPLPTTTT 285
>AE014297-3722|AAF56402.1| 917|Drosophila melanogaster CG31108-PA
protein.
Length = 917
Score = 29.1 bits (62), Expect = 6.0
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Frame = +3
Query: 201 GGLKVPVVFEGVSGAITVXDTVITRTFRVIELQVLFVFG-GHDLEVYSVVFQHGGKLPGD 377
G +K PV+F + T+ R+ V +L F+ D E Y F H G +P
Sbjct: 775 GSVKPPVMFRNMQ---TIKVASKARSAMVAKLLGDFLENYKRDTEAYVDSFDHFGMIPSS 831
Query: 378 FLAGFVFGVTECNFVVVL-LVDQLEGVMVPFVY 473
F+ E + VL L + G+M PF+Y
Sbjct: 832 AYNQFLMHAQESDLEAVLTLHTNVTGIM-PFLY 863
>AY089514-1|AAL90252.1| 709|Drosophila melanogaster GH23026p
protein.
Length = 709
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 418 KLHSVTPKTKPARKSPGSLPP 356
+LH TP T+PAR+S PP
Sbjct: 502 RLHPSTPPTRPARQSKAESPP 522
>AE014297-807|AAS65127.1| 709|Drosophila melanogaster CG9801-PC,
isoform C protein.
Length = 709
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 418 KLHSVTPKTKPARKSPGSLPP 356
+LH TP T+PAR+S PP
Sbjct: 502 RLHPSTPPTRPARQSKAESPP 522
>AE014297-806|AAF54283.1| 709|Drosophila melanogaster CG9801-PB,
isoform B protein.
Length = 709
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 418 KLHSVTPKTKPARKSPGSLPP 356
+LH TP T+PAR+S PP
Sbjct: 502 RLHPSTPPTRPARQSKAESPP 522
>AE014297-805|AAF54282.1| 709|Drosophila melanogaster CG9801-PA,
isoform A protein.
Length = 709
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 418 KLHSVTPKTKPARKSPGSLPP 356
+LH TP T+PAR+S PP
Sbjct: 502 RLHPSTPPTRPARQSKAESPP 522
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,784,687
Number of Sequences: 53049
Number of extensions: 660635
Number of successful extensions: 2516
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2508
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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