Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12c17f
(549 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 163 8e-41
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 161 3e-40
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 155 2e-38
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 155 3e-38
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 145 2e-35
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 133 1e-31
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 127 5e-30
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 82 3e-16
11_08_0071 + 28153043-28153555 31 0.61
02_05_0699 + 31013176-31013345,31013749-31013872,31013950-310140... 30 1.4
08_02_1528 + 27666356-27667081 29 3.2
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 29 3.2
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034 28 4.3
11_06_0284 + 21909758-21913645 28 5.6
02_05_0552 - 29911280-29912541,29912633-29912762 28 5.6
04_01_0275 + 3648866-3649951 27 7.5
01_06_0343 + 28566513-28566644,28566791-28568494,28569178-285692... 27 7.5
11_01_0685 - 5633034-5633309 27 9.9
10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097 27 9.9
03_05_0615 + 26137785-26138593,26139307-26141368 27 9.9
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 163 bits (396), Expect = 8e-41
Identities = 83/136 (61%), Positives = 103/136 (75%), Gaps = 4/136 (2%)
Frame = +3
Query: 141 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 314
S + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 279
Query: 315 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASN 488
ARR+SWR+ISSIEQK E G+E + + KEYR K+E EL +IC +L LLD HL+P ++
Sbjct: 280 ARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTA 339
Query: 489 PESKVFYLKMKGDYYR 536
PESKVFYLKMKGDYYR
Sbjct: 340 PESKVFYLKMKGDYYR 355
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 161 bits (391), Expect = 3e-40
Identities = 81/136 (59%), Positives = 104/136 (76%), Gaps = 4/136 (2%)
Frame = +3
Query: 141 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 314
S+ + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 61
Query: 315 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASN 488
ARR+SWR+ISSIEQK E G+E + + K+YR K+E EL +IC +L LL+ HL+P ++
Sbjct: 62 ARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTA 121
Query: 489 PESKVFYLKMKGDYYR 536
PESKVFYLKMKGDYYR
Sbjct: 122 PESKVFYLKMKGDYYR 137
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 155 bits (377), Expect = 2e-38
Identities = 79/131 (60%), Positives = 100/131 (76%), Gaps = 4/131 (3%)
Frame = +3
Query: 156 VDKEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERNLLSVAYKNVVGARRSS 329
+ +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GARR+S
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRAS 60
Query: 330 WRVISSIEQKTEG--SERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKV 503
WR++SSIEQK EG +E + KEYR K+E EL +IC +L LLD HL+P ++ ESKV
Sbjct: 61 WRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKV 120
Query: 504 FYLKMKGDYYR 536
FYLKMKGDY+R
Sbjct: 121 FYLKMKGDYHR 131
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 155 bits (375), Expect = 3e-38
Identities = 81/135 (60%), Positives = 99/135 (73%), Gaps = 4/135 (2%)
Frame = +3
Query: 144 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGV--ELSNEERNLLSVAYKNVVGA 317
S +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GA
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGA 61
Query: 318 RRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNP 491
RR+SWR+ISSIEQK E G+E KEYR ++E EL +IC +L LLD HL+P A+
Sbjct: 62 RRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSATAA 121
Query: 492 ESKVFYLKMKGDYYR 536
ESKVFYLKMKGDY+R
Sbjct: 122 ESKVFYLKMKGDYHR 136
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 145 bits (352), Expect = 2e-35
Identities = 75/132 (56%), Positives = 96/132 (72%), Gaps = 7/132 (5%)
Frame = +3
Query: 162 KEELVQRAKLAEQAERYDDMAAAMKEVTET-----GVELSNEERNLLSVAYKNVVGARRS 326
+EE+V AKLAEQAERY++M M++V G EL+ EERNLLSVAYKNV+GARR+
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69
Query: 327 SWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESK 500
SWR++SSIEQK E G+ A+ YR +VE EL IC +L LLD+ L+P A+ ++K
Sbjct: 70 SWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAK 129
Query: 501 VFYLKMKGDYYR 536
VFYLKMKGDY+R
Sbjct: 130 VFYLKMKGDYHR 141
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 133 bits (321), Expect = 1e-31
Identities = 61/126 (48%), Positives = 87/126 (69%)
Frame = +3
Query: 159 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 338
++E++V+ AKLAEQAERYDDM MK + V++S EER L SV +K +GARR+SWR+
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFKKTIGARRASWRI 62
Query: 339 ISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKM 518
+ S+EQK ++ Y+ KVE ELR +C +VL ++ H +P A++ E+ VF+ KM
Sbjct: 63 LESLEQKVTAGDQPGVTINGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKM 122
Query: 519 KGDYYR 536
KGDYYR
Sbjct: 123 KGDYYR 128
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 127 bits (307), Expect = 5e-30
Identities = 63/97 (64%), Positives = 72/97 (74%), Gaps = 2/97 (2%)
Frame = +3
Query: 252 GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMA--KEYRVKVEKEL 425
G EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK EG A + YR K+E EL
Sbjct: 18 GEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAEL 77
Query: 426 REICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYR 536
IC +L LLD HL+P A ESKVFYLKMKGDY+R
Sbjct: 78 ARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHR 114
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 81.8 bits (193), Expect = 3e-16
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Frame = +3
Query: 219 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIE--QKTEGSERKQQMA 392
M AM V + L+ EERNLLSV YKN++GA+R++ R+I SIE ++T+G E +
Sbjct: 1 MVEAMNSVAKLDEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQT 60
Query: 393 KEYRVKVEKELREICYDVLGLLDK 464
EYR KVE E+ +IC DV+ ++DK
Sbjct: 61 AEYRRKVEAEMDKICCDVINIIDK 84
>11_08_0071 + 28153043-28153555
Length = 170
Score = 31.1 bits (67), Expect = 0.61
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -2
Query: 146 GRWKRTNSLMPLSEGEKCI*TSKFKHNISFSLALNDILVLT 24
G W R N+ PL + + H++S S++L +ILV T
Sbjct: 130 GTWLRANTSCPLCRADTTPSSGDLHHHLSISVSLEEILVRT 170
>02_05_0699 +
31013176-31013345,31013749-31013872,31013950-31014032,
31014106-31014217,31014297-31014401,31014809-31014859,
31015893-31015979,31016325-31016402,31016477-31016530,
31016608-31016892
Length = 382
Score = 29.9 bits (64), Expect = 1.4
Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
Frame = +3
Query: 156 VDKEELVQRAKLAEQAERYDDMAAAMKEVTET-GVELSN-----EERNLLSVAYKNVVGA 317
V+ + L +R++L++ Y ++ A E+T E+ +ERN + +Y N
Sbjct: 250 VEAKILAKRSELSKFESEYREVLAKFTEMTSRYAQEMQTIDELLKERNAIHASYTNNTTL 309
Query: 318 RRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPES 497
+RSS K S+ Q + KE + K K + D G K PK
Sbjct: 310 QRSSSSNKGKTSSKESKSDDDQTVKKEKKSK-SKSMEGSRSDDDG-PRKEKKPKERLRRK 367
Query: 498 KVFYLKMKGDYYRVPC 545
K F + +K D R PC
Sbjct: 368 KWFNIHLKVDKRR-PC 382
>08_02_1528 + 27666356-27667081
Length = 241
Score = 28.7 bits (61), Expect = 3.2
Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Frame = +3
Query: 147 TMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRS 326
T V K+ K A + + + E E + + +LLS K + + S
Sbjct: 130 TKKVQKQSKKISKKSASAEQEGSRVIKLLAEAREVAISMLESSSHLLS---KKITTSNSS 186
Query: 327 SWRVISSIEQKTE-GSERKQQMAKEYRV 407
W ++S QKT + +Q A E+ +
Sbjct: 187 KWSLVSKAFQKTRLACQEEQLQALEFAI 214
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 28.7 bits (61), Expect = 3.2
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Frame = +3
Query: 138 PSSTMSVDKEEL-VQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVG 314
P + D E++ ++ K AE ER + KE ++ SNEE L +KN
Sbjct: 327 PHYRVEEDGEKIKLEEIKGAESVERINFEERITKEEKNEAMKSSNEEVVSLVTGWKN--- 383
Query: 315 ARRSSWRV-ISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLD 461
R W V + ++ T K+ AK + + +LR +LG +D
Sbjct: 384 -RIEEWDVDVDENDKDTRKLTPKRDPAKVDKAEKYTDLRSPICCILGHVD 432
>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
Length = 930
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Frame = +3
Query: 420 ELREICYDVLGLLDKHLIPKASNPES-----KVFYLKMKG 524
+LRE+ YD+ LD+ L+ A+ P S K+ K+KG
Sbjct: 71 DLRELSYDMEDSLDRFLVKSAAEPGSCKKLFKILLTKIKG 110
>11_06_0284 + 21909758-21913645
Length = 1295
Score = 27.9 bits (59), Expect = 5.6
Identities = 20/88 (22%), Positives = 41/88 (46%)
Frame = +3
Query: 168 ELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISS 347
+L + + E+ + ++ ++E+T+ G E EE+N G + +
Sbjct: 403 KLKRHMEADEKTKEFNKQIGVVEEITKQGGERKEEEKNEGEEENGEEEG-KEKELKGRKD 461
Query: 348 IEQKTEGSERKQQMAKEYRVKVEKELRE 431
E+K +G R+++ +E+ K EKE E
Sbjct: 462 KEKKEKGG-REERKEEEHHEKQEKEKEE 488
>02_05_0552 - 29911280-29912541,29912633-29912762
Length = 463
Score = 27.9 bits (59), Expect = 5.6
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 87 SNTFFPFRQGHQ*ISPLPSSTMSVDKEELVQRAKL-AEQAERYDDMAAAM 233
S T H SP+PSS +EEL++R +L AE +R M AA+
Sbjct: 50 SGTTVALNHRHGPCSPVPSSKKRPTEEELLKRDQLRAEHIQRKFAMNAAV 99
>04_01_0275 + 3648866-3649951
Length = 361
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 321 RSSWRVISSIEQKTEGSERKQQMAKEYR--VKVEKELREICYDVL 449
R SW +ISS+ +K E + Y ++V ++R++ +D +
Sbjct: 19 RRSWMLISSLGKKLASEEEWMEYEYHYSRGIRVSPDIRKVLFDCI 63
>01_06_0343 +
28566513-28566644,28566791-28568494,28569178-28569240,
28569241-28569310,28570438-28570715,28571886-28571963,
28573017-28573715,28573811-28573913,28574096-28574196,
28574272-28574446,28574843-28575013,28575534-28575634,
28575706-28575771
Length = 1246
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/84 (22%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Frame = +3
Query: 192 AEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGAR---RSSWRVISSIEQKT 362
A AE ++ A KE+ +E+ + + A +++V + +SS R I ++++
Sbjct: 129 ARYAEVVQELDQAKKELLRLRLEVRSAAE-AKAKAERDIVASACTIQSSLRAIDEMKRRV 187
Query: 363 EGSERKQQMAKEYRVKVEKELREI 434
+ + + + + R++ E+E REI
Sbjct: 188 DEANEEHVLVELARIEAERERREI 211
>11_01_0685 - 5633034-5633309
Length = 91
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 2 VSPLAPQPSKPVYRSAQEKN*YCA 73
VSP Q +PV ++ Q+KN YC+
Sbjct: 6 VSPAKQQQQQPVDQNQQQKNLYCS 29
>10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097
Length = 214
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -3
Query: 376 LSEPSVFCSIEEMTRHDDRRAPTTFL*ATERR 281
L++ S CSI ++TR D + A T TER+
Sbjct: 154 LADKSTGCSIRKITRSDKKPAKTRSFVETERK 185
>03_05_0615 + 26137785-26138593,26139307-26141368
Length = 956
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 183 AKLAEQAE-RYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWR 335
+KLA AE +Y D+ +E+T ELS+ LL +A + ++ WR
Sbjct: 13 SKLATLAEQKYGDVRRIRREITFLTDELSSMNALLLKLADMEELDSQLKEWR 64
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,731,733
Number of Sequences: 37544
Number of extensions: 293661
Number of successful extensions: 931
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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