Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12c16r
(847 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 42 8e-05
SPAC16E8.10c |||mitochondrial ribosomal protein subunit S7|Schiz... 33 0.067
SPCC330.04c |mug135||DUF1773 family protein 3|Schizosaccharomyce... 32 0.089
SPBC119.12 |||Golgi matrix protein |Schizosaccharomyces pombe|ch... 29 0.63
SPAC8C9.10c |||ribosome biogenesis protein Rrp14-N|Schizosacchar... 29 1.1
SPAC1805.04 |nup132|Nup133b, Nup133b|nucleoporin Nup132|Schizosa... 29 1.1
SPAC607.10 |spo3||sporulation protein Spo3|Schizosaccharomyces p... 29 1.1
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 28 1.4
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 28 1.4
SPAC24B11.11c |sid2||Sid2p-Mob1p kinase complex|Schizosaccharomy... 28 1.9
SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces po... 28 1.9
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 28 1.9
SPAC167.02 |ptb1||geranylgeranyltransferase II beta subunit |Sch... 28 1.9
SPAC1F5.03c |||FAD-dependent oxidoreductase |Schizosaccharomyces... 28 1.9
SPAC3C7.12 |tip1|noc1|CLIP170 family protein Tip1|Schizosaccharo... 28 1.9
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 2.5
SPBC12C2.04 |||NAD binding dehydrogenase family protein|Schizosa... 27 2.5
SPAC630.11 |vps55||vacuolar sorting protein Vps55 |Schizosacchar... 27 2.5
SPBC83.11 |||triose phosphate transporter|Schizosaccharomyces po... 27 3.3
SPBC4B4.10c |mug77|atg5|autophagy associated protein Atg5 |Schiz... 27 3.3
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 4.4
SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyce... 27 4.4
SPAC19A8.12 |dcp2||mRNA decapping complex subunit Dcp2|Schizosac... 27 4.4
SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 5.8
SPCC790.02 |pep3|vps18, vps18|ubiquitin-protein ligase E3 |Schiz... 26 5.8
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 26 5.8
SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 26 7.7
SPBC31F10.04c |srb4|med17|mediator complex subunit Srb4|Schizosa... 26 7.7
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 7.7
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 26 7.7
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 26 7.7
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 42.3 bits (95), Expect = 8e-05
Identities = 50/196 (25%), Positives = 78/196 (39%), Gaps = 9/196 (4%)
Frame = -2
Query: 630 ELSQQTQTNFDKLEDLGQQTQNHWGKLEDLGQQTQNQWDNLENLG----QQTQDSWGKAD 463
E Q + +KL L +Q +L++ + QN+ + L L +QTQDS K
Sbjct: 478 EKQLQMKETVNKLTSLQEQNNEFDRQLKEQEEDLQNKEEELTELRKLLREQTQDSQ-KLR 536
Query: 462 ELSQQTQTNFDKLEDLGQQTQKHWGKL-EDLGQQTQNQRRNLENLGQQTQDSWGKAEDLN 286
L +Q + + +DL Q + H+ L D Q ++ +L N + K +LN
Sbjct: 537 LLVEQLEL---ERQDLKQAGENHYSNLSSDYETQIKSLESSLTNSQAECVSFQEKINELN 593
Query: 285 QQTQNNFDKLEDLGQQTQNQWGKLENFGQQTQ----DNWDKAKDLSQQTQNNFHKLESFG 118
Q KL + ++ Q EN +TQ DN + L + Q LE
Sbjct: 594 SQIDELKLKLNEANKKYQELAISFENSNVKTQSVEPDNGLSLEALKNENQTLLKNLEDST 653
Query: 117 QQTHHHWNSFSREQNQ 70
+ H SF NQ
Sbjct: 654 ARYEHLQKSFKNVFNQ 669
Score = 27.9 bits (59), Expect = 1.9
Identities = 18/90 (20%), Positives = 39/90 (43%)
Frame = -2
Query: 477 WGKADELSQQTQTNFDKLEDLGQQTQKHWGKLEDLGQQTQNQRRNLENLGQQTQDSWGKA 298
+ A E Q + +KL L +Q + +L++ + QN+ L L + ++ +
Sbjct: 473 FSSAQEKQLQMKETVNKLTSLQEQNNEFDRQLKEQEEDLQNKEEELTELRKLLREQTQDS 532
Query: 297 EDLNQQTQNNFDKLEDLGQQTQNQWGKLEN 208
+ L + + +DL Q +N + L +
Sbjct: 533 QKLRLLVEQLELERQDLKQAGENHYSNLSS 562
>SPAC16E8.10c |||mitochondrial ribosomal protein subunit
S7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 259
Score = 32.7 bits (71), Expect = 0.067
Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
Frame = -2
Query: 555 KLEDLGQQTQNQWDN--LENLGQQTQDS 478
K+ED+ +++ QWDN LENL Q QDS
Sbjct: 46 KIEDINERSNPQWDNAGLENLLNQLQDS 73
>SPCC330.04c |mug135||DUF1773 family protein 3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 357
Score = 32.3 bits (70), Expect = 0.089
Identities = 29/184 (15%), Positives = 75/184 (40%), Gaps = 5/184 (2%)
Frame = -2
Query: 618 QTQTNFDKLEDLGQQTQNHWGKLEDLGQQTQNQWDNLENLGQQTQDSWGKADELSQQTQT 439
+++ D L++ + G+ + ++ + +W ++ + W KA E + +
Sbjct: 99 RSERTLDSLDEPPAWFRREMGEWKKAREEDKAEWKKAR---EEDKAEWKKARE---EDKA 152
Query: 438 NFDKLEDLGQQTQKHWGKLEDLGQQTQNQRRNLENLGQQTQDSWGKAEDLNQQTQNNFDK 259
+ K + + + W K + + + R + + + D W K+ D +++ + + K
Sbjct: 153 EWKKARE---EDKAEWKKAREEDKAEWKKAREEDKEWRNSMDEWRKSMDEWRKSMDEWRK 209
Query: 258 LEDLGQQTQNQWGK-----LENFGQQTQDNWDKAKDLSQQTQNNFHKLESFGQQTHHHWN 94
D +++ ++W K LEN ++ D +D+ N K++ + + N
Sbjct: 210 SMDEWRKSTDEWRKSTDERLENLLNIVREILDVQRDMRNDLSNLTRKVDRMDMRLSRNNN 269
Query: 93 SFSR 82
R
Sbjct: 270 MIMR 273
>SPBC119.12 |||Golgi matrix protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 401
Score = 29.5 bits (63), Expect = 0.63
Identities = 22/98 (22%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Frame = -2
Query: 630 ELSQQTQTNFDKLEDLGQQTQNHWGKLEDLGQQTQN-QWDNLENLGQQTQDSWGKA-DEL 457
+ +Q ++ E + Q H L + ++ + + ENLG+ T++ W KA D++
Sbjct: 190 DCEEQLARETERQEQYEVEIQRHLTNQHQLEIELESTKASHTENLGELTRN-WQKAMDDV 248
Query: 456 SQQTQTNFDKLEDLGQQ---TQKHWGKLEDLGQQTQNQ 352
+++ + + EDL + TQK ++ DL + + +
Sbjct: 249 TEKFASKSKEYEDLQNELDATQKRLSRVSDLEHEVKEK 286
Score = 27.9 bits (59), Expect = 1.9
Identities = 30/133 (22%), Positives = 64/133 (48%), Gaps = 6/133 (4%)
Frame = -2
Query: 507 ENLGQQTQDSWGKADELSQQTQTNFDKLEDLGQQTQKHWGKLEDLGQQTQNQRRNLENLG 328
E L ++T+ E+ Q+ TN +LE + T+ E+LG+ T+N ++ ++++
Sbjct: 193 EQLARETERQEQYEVEI-QRHLTNQHQLEIELESTKA--SHTENLGELTRNWQKAMDDVT 249
Query: 327 QQTQDSWGKAEDLNQQ---TQNNFDKLEDLGQQTQNQW---GKLENFGQQTQDNWDKAKD 166
++ + EDL + TQ ++ DL + + + GKL++ ++ KA
Sbjct: 250 EKFASKSKEYEDLQNELDATQKRLSRVSDLEHEVKEKTLLIGKLQHEAVVLNEHLTKALC 309
Query: 165 LSQQTQNNFHKLE 127
+ + NN K++
Sbjct: 310 MLKD-GNNAEKID 321
>SPAC8C9.10c |||ribosome biogenesis protein
Rrp14-N|Schizosaccharomyces pombe|chr 1|||Manual
Length = 154
Score = 28.7 bits (61), Expect = 1.1
Identities = 23/84 (27%), Positives = 40/84 (47%)
Frame = -2
Query: 546 DLGQQTQNQWDNLENLGQQTQDSWGKADELSQQTQTNFDKLEDLGQQTQKHWGKLEDLGQ 367
D Q ++W+ + T S A+ +SQ K++DL ++ K DL Q
Sbjct: 64 DDDSQKSSKWEQSSTMSDDTDVSDRHAESMSQIRGKLASKIQDLREKR-----KAGDLNQ 118
Query: 366 QTQNQRRNLENLGQQTQDSWGKAE 295
+ QN +R +EN + +Q GK++
Sbjct: 119 KRQN-KRPVEN-EKDSQKGSGKSK 140
>SPAC1805.04 |nup132|Nup133b, Nup133b|nucleoporin
Nup132|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1162
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 368 CPKSSNLPQCFCVCCPKSSNLSKLV*VCWLNS 463
CP +S L CP + NL + VCW NS
Sbjct: 293 CPDASGLEVLDLTICPTNGNLVSFL-VCWKNS 323
>SPAC607.10 |spo3||sporulation protein Spo3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1028
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 93 CSSDDVFVVQSFQVYENCFEFAGLSPLPYPSYLVSADQNFRAF 221
C+SD VV + +E+CF+ G+ Y + +NF F
Sbjct: 290 CNSDASSVVSNLSDFEDCFDQFGVYDKEYEKKIEKTKRNFPKF 332
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 28.3 bits (60), Expect = 1.4
Identities = 31/164 (18%), Positives = 67/164 (40%), Gaps = 3/164 (1%)
Frame = -2
Query: 606 NFDKLEDL--GQQTQNHWGKLEDLGQQTQNQWDNL-ENLGQQTQDSWGKADELSQQTQTN 436
N D L +L + N LE ++ +N + L E L ++ D+ + + + +
Sbjct: 728 NRDLLSELEKSKSLNNSLAALESKNKKLENDLNLLTEKLNKKNADTESFKNTIREAELSK 787
Query: 435 FDKLEDLGQQTQKHWGKLEDLGQQTQNQRRNLENLGQQTQDSWGKAEDLNQQTQNNFDKL 256
++LG + + DL + + L+ L Q + E LN++ D+L
Sbjct: 788 KALNDNLGNKENI----ISDLKNKLSEESTRLQELQSQLNQDKNQIETLNERISAAADEL 843
Query: 255 EDLGQQTQNQWGKLENFGQQTQDNWDKAKDLSQQTQNNFHKLES 124
+ +NQ +L+ Q+ + +K ++ + + K+ S
Sbjct: 844 SSMESINKNQANELKLAKQKCSNLQEKINFGNKLAKEHTEKISS 887
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 28.3 bits (60), Expect = 1.4
Identities = 27/138 (19%), Positives = 56/138 (40%), Gaps = 2/138 (1%)
Frame = -2
Query: 513 NLENLGQQTQDSWGKADELSQQTQTNFDKLEDLGQQTQKHWGKLEDLGQQTQNQRRNLEN 334
+ + L + Q+ +++Q + KL+ L + K L + + R L
Sbjct: 610 SFKKLNESHQELENNHQTITKQLKDTSSKLQQLQLERANFEQKESTLSDENNDLRTKLLK 669
Query: 333 LGQQTQDSWGKAEDLNQQTQNNFDKLEDLGQQTQN-QWGKLENFG-QQTQDNWDKAKDLS 160
L + + K ED++ +N EDL + + ++ KLE ++ DN +
Sbjct: 670 LEESNKSLIKKQEDVDSLEKNIQTLKEDLRKSEEALRFSKLEAKNLREVIDNLKGKHETL 729
Query: 159 QQTQNNFHKLESFGQQTH 106
+ +N+ H S + T+
Sbjct: 730 EAQRNDLHSSLSDAKNTN 747
Score = 27.9 bits (59), Expect = 1.9
Identities = 34/165 (20%), Positives = 65/165 (39%), Gaps = 7/165 (4%)
Frame = -2
Query: 597 KLEDLGQQTQNHWGKLEDLGQQTQNQWDNLENLGQQTQDSWGKADELSQQTQTNFDKLED 418
+L +L +Q + E Q+ ++ N ++ + + +EL + QT E
Sbjct: 491 ELNNLREQIKEQKKVSESTQSSLQSLQRDILNEKKKHEVYESQLNELKGELQTEISNSEH 550
Query: 417 LGQQTQKHWGKLEDL---GQQTQNQRRNLENLGQQTQDSWGKAEDLNQQTQNNFDKLEDL 247
L Q + E + + +L+ L Q+ K+ ++ + NF L+
Sbjct: 551 LSSQLSTLAAEKEAAVATNNELSESKNSLQTLCNAFQEKLAKSVMQLKENEQNFSSLDTS 610
Query: 246 GQQTQNQWGKLENFGQ----QTQDNWDKAKDLSQQTQNNFHKLES 124
++ +LEN Q Q +D K + L Q + NF + ES
Sbjct: 611 FKKLNESHQELENNHQTITKQLKDTSSKLQQL-QLERANFEQKES 654
Score = 27.9 bits (59), Expect = 1.9
Identities = 20/91 (21%), Positives = 35/91 (38%)
Frame = -2
Query: 696 KINGTTLKILGQQTQDSWGKPDELSQQTQTNFDKLEDLGQQTQNHWGKLEDLGQQTQNQW 517
KI T++ L + EL + + DK+ + ++ GKL+ L Q + Q
Sbjct: 1663 KIKSNTVESLQDVLTSVQARNAELEDEVSRSVDKIRRRDDRCEHLSGKLKKLHSQLEEQH 1722
Query: 516 DNLENLGQQTQDSWGKADELSQQTQTNFDKL 424
+ QQ G E ++ + KL
Sbjct: 1723 ETFFRAEQQRMTQLGFLKETVKKQEKLLKKL 1753
Score = 26.2 bits (55), Expect = 5.8
Identities = 29/151 (19%), Positives = 61/151 (40%), Gaps = 10/151 (6%)
Frame = -2
Query: 549 EDLGQQTQNQWDNLENLGQQTQDSWGKADELSQQ---TQTNFDKLEDLGQQTQKHWGKLE 379
E L +N +N+ +L + + + D+L + + ++ L + QT K LE
Sbjct: 1014 ERLMDDLKNNGENIASLQTEIEKKRAENDDLQSKLSVVSSEYENLLLISSQTNK---SLE 1070
Query: 378 DLGQQTQNQRRNLENL-------GQQTQDSWGKAEDLNQQTQNNFDKLEDLGQQTQNQWG 220
D Q + +N++ L + ++ K L ++ D+L L ++++ Q
Sbjct: 1071 DKTNQLKYIEKNVQKLLDEKDQRNVELEELTSKYGKLGEENAQIKDELLALRKKSKKQHD 1130
Query: 219 KLENFGQQTQDNWDKAKDLSQQTQNNFHKLE 127
NF ++ D + L+ + LE
Sbjct: 1131 LCANFVDDLKEKSDALEQLTNEKNELIVSLE 1161
>SPAC24B11.11c |sid2||Sid2p-Mob1p kinase complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 607
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = -1
Query: 811 LGKLRLKSANSKHFDKLEDLGHQTQNHWGKLEDLGPPTQNQWDN 680
+ KL + S + D+ +L ++ NHW G P +W+N
Sbjct: 79 ISKLPIASPIPRGLDRSGELSYKDNNHWSDRSSTGSP---RWEN 119
>SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 549
Score = 27.9 bits (59), Expect = 1.9
Identities = 24/149 (16%), Positives = 60/149 (40%), Gaps = 9/149 (6%)
Frame = -2
Query: 561 WGKLEDLGQQTQNQWDNLENLGQQTQDSWGKADELSQ----QTQTNFDKLEDLG-QQTQK 397
WG L+D +T W + ++ + ++ W ++ L Q ++DK ++ ++
Sbjct: 265 WGNLDDGWGETNGSWSSTDDT-KHYKNEWAESINLDNFNRPSQQEDYDKPKNTQVSRSSN 323
Query: 396 HWGKLEDLGQQTQNQRRNLENLGQQTQDSWGKAEDLNQQT---QNNFDKLEDLGQQTQN- 229
H + + +++ + +D+ +++ L + + NF+ L +
Sbjct: 324 HHRRYDSYHPDSRSDSYRSKREHYDNRDTGPRSKHLEKSSYVYNQNFEDRTHLSDHGAHF 383
Query: 228 QWGKLENFGQQTQDNWDKAKDLSQQTQNN 142
G +F Q KA D ++++ N
Sbjct: 384 HLGNANDFNMQGSSRKRKASDRQRESREN 412
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 27.9 bits (59), Expect = 1.9
Identities = 22/121 (18%), Positives = 47/121 (38%), Gaps = 1/121 (0%)
Frame = -2
Query: 432 DKLEDLGQQTQKHWGKLEDLGQQTQNQRRNLENLGQQTQDSWGKAEDLNQQTQNNFDKLE 253
D+ + Q + + G +L+N G++ + W ++ + ++ D E
Sbjct: 1906 DEQDASSQNDDSSFDEASSHGDVISIDEEDLDNQGEEFE--WEDEDNASSGYEDELDYNE 1963
Query: 252 D-LGQQTQNQWGKLENFGQQTQDNWDKAKDLSQQTQNNFHKLESFGQQTHHHWNSFSREQ 76
D +G+ + +EN +T DN D ++ + LE+ + + F E
Sbjct: 1964 DEVGENDSTTFEAMENAFTETSDNDDHLEEADHVSPVEIDFLENDENSSSEQDDEFQWEW 2023
Query: 75 N 73
N
Sbjct: 2024 N 2024
>SPAC167.02 |ptb1||geranylgeranyltransferase II beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 311
Score = 27.9 bits (59), Expect = 1.9
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +3
Query: 69 VDFVLG*NCSSDDVFVVQ---SFQVYENCFEFAGLSPLPYPS 185
+DF+LG + F + + VY CF AGLS L +P+
Sbjct: 250 IDFLLGTQDADSGGFADRKEDATDVYHTCFSLAGLSLLQFPN 291
>SPAC1F5.03c |||FAD-dependent oxidoreductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 382
Score = 27.9 bits (59), Expect = 1.9
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -2
Query: 609 TNFDKLEDLGQQTQNHWGKLEDLGQQTQNQWDNLENLGQQTQDSWG-KADELSQQ 448
+ F LE G T + +L ++ +Q+D + G + D+W KADE QQ
Sbjct: 53 SGFLSLEWHGPSTSSLAALSYNLHKELSDQYDGVNKWGYRALDTWSIKADENCQQ 107
>SPAC3C7.12 |tip1|noc1|CLIP170 family protein
Tip1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 461
Score = 27.9 bits (59), Expect = 1.9
Identities = 31/159 (19%), Positives = 66/159 (41%), Gaps = 1/159 (0%)
Frame = -2
Query: 597 KLEDLGQQTQNHWGKLEDLGQQTQNQWDNLENLGQQTQDSWGKADELSQQTQTNFDKLED 418
++EDL + QNH +LE++ D L++L D + DEL ++ ++++
Sbjct: 141 RIEDLLYERQNHQQQLEEVLATV----DQLQSLVTNFNDQQDEVDELRERITLKEERIQQ 196
Query: 417 L-GQQTQKHWGKLEDLGQQTQNQRRNLENLGQQTQDSWGKAEDLNQQTQNNFDKLEDLGQ 241
+ + +Q+ + + ++ R +E + + + E + ++ D L L Q
Sbjct: 197 MRNEASQRRFEFKTTIECLEESSNRAIETYENRIAELEAQLE-MYMSGKSEDDLLFSLQQ 255
Query: 240 QTQNQWGKLENFGQQTQDNWDKAKDLSQQTQNNFHKLES 124
+ ++E Q+ D K K S +ES
Sbjct: 256 ERDYALNQVEIL-QERVDTLMKQKANSSTANEKLSHMES 293
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.5 bits (58), Expect = 2.5
Identities = 36/170 (21%), Positives = 64/170 (37%), Gaps = 5/170 (2%)
Frame = -2
Query: 600 DKLEDLGQQTQNHWGKLEDLGQQTQNQWDNLENLGQQTQDSWGKADE----LSQQTQTNF 433
+K+E L N E L Q Q + ++ L ++ E L+ T T+
Sbjct: 1258 EKIETLKTDLANFRLNKEQLESQLQTEKAAVKKLENSNEEYKRHNQEILLSLNSSTSTSS 1317
Query: 432 DKLEDLGQQTQKHWGKLEDLGQQTQNQRRNLENLGQQTQDSWGKAEDLNQQTQNNFDKLE 253
D + K +E+L Q+ + + LE + K+EDL + N K+E
Sbjct: 1318 DASRLKNELVSKE-NLIEELNQEIGHLKSELETVKS-------KSEDLENERAQNQSKIE 1369
Query: 252 DLG-QQTQNQWGKLENFGQQTQDNWDKAKDLSQQTQNNFHKLESFGQQTH 106
L + T+ + Q + +K + QQ +LE+ + H
Sbjct: 1370 QLELKNTKLAAAWRTKYEQVVNKSLEKHNQIRQQLSQKTSELEAKVAECH 1419
>SPBC12C2.04 |||NAD binding dehydrogenase family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 384
Score = 27.5 bits (58), Expect = 2.5
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 477 SYLVSADPNFRGCPIDFVFVALNLL-IYPNGFVFV 578
+YL+ P+F GC + + L +L YPN +F+
Sbjct: 102 AYLIGIPPDFHGCTTPGMDMELEILRKYPNAALFI 136
>SPAC630.11 |vps55||vacuolar sorting protein Vps55
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 122
Score = 27.5 bits (58), Expect = 2.5
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 564 GFVFVVLSLPIYQNWFE--FAGLTRLVFPSYLVSAD 665
GF+ V+LS +++NW+ A L L+ Y S D
Sbjct: 17 GFMLVILSCALFKNWYPLLIAPLPNLLTKKYSTSHD 52
>SPBC83.11 |||triose phosphate transporter|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 434
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 540 LNLLIYPNGFVFVVLSLPIYQNWFEFAGLTRLVFPSYL 653
LNLL+Y +G F+V+ +P++ FA L + P +L
Sbjct: 190 LNLLLYSSGVAFIVM-IPVWLYQEGFAYLPEVGSPVFL 226
>SPBC4B4.10c |mug77|atg5|autophagy associated protein Atg5
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 261
Score = 27.1 bits (57), Expect = 3.3
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +3
Query: 318 VSADLNFRGFSVDFVFVAPN----LLIYPNVFVFVVPSLPIYQNWFEFVGL 458
+S +++ G S+ ++ P I PNV + PS+P+ + W ++ G+
Sbjct: 19 ISVRIDYEGNSLAYLANVPRQSYFAQILPNVQRLLAPSIPLSECWLDYNGV 69
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 26.6 bits (56), Expect = 4.4
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = -2
Query: 513 NLENLGQQTQDSWGKADELSQQTQTNFDKLEDLGQQTQKHWGKLEDLGQQTQNQRRNLEN 334
N+E S + DEL +Q +T L DL +Q K K+++L ++ + + E
Sbjct: 131 NVETEVTSRSTSSQEKDELEKQVKT----LHDLNEQKDK---KIKELKERINDLTYDYET 183
Query: 333 LGQQTQDSWGK 301
L DS GK
Sbjct: 184 LKANADDSEGK 194
>SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1112
Score = 26.6 bits (56), Expect = 4.4
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = -2
Query: 516 DNLENLGQQTQDSWGKA---DELSQQTQTNFDKLEDLGQQTQKHWGKLEDLGQQTQNQRR 346
D ++ L Q D WGK+ ++L + T+T D D+ + + +ED T N
Sbjct: 501 DLIDPLPFQPMD-WGKSIFFEKLKKPTETFMDSKTDIPSEAPDNSKLVEDTNLHTINATV 559
Query: 345 NLEN 334
N+E+
Sbjct: 560 NIES 563
>SPAC19A8.12 |dcp2||mRNA decapping complex subunit
Dcp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 26.6 bits (56), Expect = 4.4
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = -2
Query: 378 DLGQQTQNQRRNLENLGQQTQ-DSWGKAEDLNQQTQNNFDKLEDLGQQTQNQWGKLENFG 202
DL ++QN R + ++ + ++ K+ DL ++T E L + NQ+ L+
Sbjct: 599 DLQNKSQNNERKASSQVKELEVKNYSKSTDLLKKTLRIPRNDEPL--EAANQFDLLKVSP 656
Query: 201 QQTQDNWDKAKDLSQQTQNNFHKLESFGQQTHH 103
QQ + K +LSQ N K E+ +H
Sbjct: 657 QQKSEVPPKRNELSQSKLKNRKKKENSETNKNH 689
>SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 230
Score = 26.2 bits (55), Expect = 5.8
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 380 SNLPQCFCVCCPKSSNLSKLV*VCWLNSSALPQLSCVC 493
S LP+ FC+C K + L+ + + + L CVC
Sbjct: 195 SRLPRLFCLCLQKKRRV--LIPFAFTSFRKIASLPCVC 230
>SPCC790.02 |pep3|vps18, vps18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 900
Score = 26.2 bits (55), Expect = 5.8
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = -2
Query: 555 KLEDLGQQTQNQWDNLENLGQQTQDSWGKADELSQQTQTNFDKLED 418
KL+DL ++ D+ +Q G+A E++ + QTN + + +
Sbjct: 781 KLDDLSDNVCDELDHCMKRIEQLDFEIGQASEVAHEIQTNAENMRN 826
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 26.2 bits (55), Expect = 5.8
Identities = 30/133 (22%), Positives = 58/133 (43%), Gaps = 1/133 (0%)
Frame = -2
Query: 537 QQTQNQWDNLENLGQQTQDSWGKADEL-SQQTQTNFDKLEDLGQQTQKHWGKLEDLGQQT 361
++ QN +E +T +S + L + + DK E++ ++TQ+ +ED +T
Sbjct: 841 KKQQNSKSEVERDLVETNNSLTAVENLLTTERAIALDK-EEILRRTQERLANIEDSFSET 899
Query: 360 QNQRRNLENLGQQTQDSWGKAEDLNQQTQNNFDKLEDLGQQTQNQWGKLENFGQQTQDNW 181
+ Q ENL +++ +L + K+E L + QN+ E + +D
Sbjct: 900 KQQN---ENLQRESASLKQINNELESELLEKTSKVETLLSE-QNE--LKEKLSLEEKDLL 953
Query: 180 DKAKDLSQQTQNN 142
D +L +NN
Sbjct: 954 DTKGELESLRENN 966
Score = 26.2 bits (55), Expect = 5.8
Identities = 24/119 (20%), Positives = 51/119 (42%)
Frame = -2
Query: 627 LSQQTQTNFDKLEDLGQQTQNHWGKLEDLGQQTQNQWDNLENLGQQTQDSWGKADELSQQ 448
L+ + DK E++ ++TQ +ED +T+ Q +NL+ + +EL +
Sbjct: 868 LTTERAIALDK-EEILRRTQERLANIEDSFSETKQQNENLQRESASLKQI---NNELESE 923
Query: 447 TQTNFDKLEDLGQQTQKHWGKLEDLGQQTQNQRRNLENLGQQTQDSWGKAEDLNQQTQN 271
K+E L + + KL + + + LE+L + + + N+Q ++
Sbjct: 924 LLEKTSKVETLLSEQNELKEKLSLEEKDLLDTKGELESLRENNATVLSEKAEFNEQCKS 982
>SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 265
Score = 25.8 bits (54), Expect = 7.7
Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
Frame = -2
Query: 483 DSWGKADELS-QQTQTNFDKLEDLGQQTQKHWGKLEDLGQQTQNQRRNLENLGQQTQDSW 307
DS K E+S ++ +T + E + + + D +TQ R LEN+ Q+ +
Sbjct: 126 DSSNKNSEVSIKRRKTESNSQESVDSSNSESSDEESDSEDETQQLLRELENIKQERKREQ 185
Query: 306 GKAEDLNQQTQNNFDKLE-DLGQQTQNQWGKLENFGQQTQDNWDK 175
E+ N+ + + E G + N K + Q + WD+
Sbjct: 186 MLQEEKNRALEQEKREREIAFGNELLN---KASSGSFQVKRRWDE 227
>SPBC31F10.04c |srb4|med17|mediator complex subunit
Srb4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 545
Score = 25.8 bits (54), Expect = 7.7
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 159 QQTQNNFHKLESFGQQTHHHWNSFSREQNQ 70
Q + N F L++ Q HH NS SR +
Sbjct: 514 QYSSNQFSSLKNVCQYIEHHINSLSRRSKK 543
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 25.8 bits (54), Expect = 7.7
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = -2
Query: 543 LGQQTQNQWDNLENLGQQTQDSWGKADELSQQTQTNFDKLED----LGQQTQKHWGKLED 376
L + +NQ NL NL ++ S GKAD L+ ++ +N DK+ L Q H+ E
Sbjct: 322 LNEAEENQ--NLLNL--RSPKSSGKADNLTIKSSSNIDKVTSNDLYLDNNLQSHFKVTE- 376
Query: 375 LGQQTQNQRRNLEN 334
Q T R+ N
Sbjct: 377 -SQPTNLGRKEYSN 389
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 25.8 bits (54), Expect = 7.7
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 4/106 (3%)
Frame = -2
Query: 474 GKADELSQQTQTNFDKLEDLGQQT---QKHWGKLEDLGQQTQNQRRNL-ENLGQQTQDSW 307
GKA TN +E ++T Q+ E++ + Q + + E+L Q S
Sbjct: 274 GKASTSPSTKDTNMRLVEGHNEETLALQRGKYTQEEVDKLIQERMEKVAEDL--HAQYSA 331
Query: 306 GKAEDLNQQTQNNFDKLEDLGQQTQNQWGKLENFGQQTQDNWDKAK 169
+ +N N K E Q+ QNQ G N + + NW++ +
Sbjct: 332 KHTQKINAFKANYARKYEATIQELQNQIGTAPNAPKISNSNWEEER 377
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 25.8 bits (54), Expect = 7.7
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -2
Query: 507 ENLGQQTQDSWGKADELSQQTQTNFDKLEDLGQQTQKHWGKLEDLGQQTQNQRRNLENLG 328
EN+G +T + +E++ T DKL + + + KL DLG R LEN G
Sbjct: 156 ENIGSETSIPFENHNEITNMN-TAKDKLS-----SNEMYEKLRDLGFSDDQSRLALENSG 209
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,692,973
Number of Sequences: 5004
Number of extensions: 83335
Number of successful extensions: 304
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 295
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 418457710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -