Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12c13f
         (583 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    29   0.083
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     24   3.1  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    24   4.1  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          23   5.5  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   5.5  
AY062191-1|AAL58552.1|  151|Anopheles gambiae cytochrome P450 CY...    23   9.5  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   9.5  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 29.5 bits (63), Expect = 0.083
 Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
 Frame = +3

Query: 192 SIDYTKVTIKEKELYTPPL--DEVACVLSNGLTT--NF-KFVEVSVADSPDLTEPPYYLK 356
           S+D  K T K +ELY PPL  ++ + +  +G+++  NF KF E+ V  S +   PP +++
Sbjct: 118 SMDQVK-TDKPRELYIPPLPTEDESLIFGSGISSGINFDKFEEIQVRVSGE--NPPDHVE 174

Query: 357 S 359
           S
Sbjct: 175 S 175


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -1

Query: 532 FTPRYGHGPAPAPARKAGSRFKCSSSLARS 443
           F P +G GP   P R+   R    SS + S
Sbjct: 24  FLPHFGQGPRGQPQRQQVQRSDSDSSSSES 53


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +1

Query: 418 RRSNATRYTTWPSCWNT*TATPPSSPALEPDRXR 519
           RRS +TR T+WP       + P S P   P R R
Sbjct: 278 RRSRSTRPTSWP------RSRPTSKPKRLPRRRR 305


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 430 RLTCGTKYGGPPISTSXASPVNPG 359
           R TCGT +    IS+  A P +PG
Sbjct: 208 RKTCGTGWKYRSISSLHAPPSHPG 231


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 427 NATRYTTWPSCWN 465
           N T Y +WPS W+
Sbjct: 195 NRTLYMSWPSSWS 207


>AY062191-1|AAL58552.1|  151|Anopheles gambiae cytochrome P450
           CYP4H16 protein.
          Length = 151

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = +3

Query: 162 TLVTSTARMTSIDYTKVTIKEKELYTPPLDEVACVLSNGLTTN 290
           T+V + A +  + Y  + IKE     PP+  V   L   +  N
Sbjct: 48  TIVLTNALLQELKYLDLVIKESLRLVPPVPFVGRKLLEDMEMN 90


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 529  TPRYGHGPAPAPARK 485
            TPR G  PA  PA+K
Sbjct: 1100 TPRIGPAPAVEPAKK 1114


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,182
Number of Sequences: 2352
Number of extensions: 11974
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)