Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12c13f
(583 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR533538-1|CAG38569.1| 315|Homo sapiens PTD012 protein. 79 1e-14
BC012298-1|AAH12298.1| 265|Homo sapiens chromosome 11 open read... 79 1e-14
AL136605-1|CAB66540.1| 315|Homo sapiens hypothetical protein pr... 79 1e-14
BC007110-1|AAH07110.2| 310|Homo sapiens C11orf54 protein protein. 69 9e-12
AK130578-1|BAC85386.1| 241|Homo sapiens protein ( Homo sapiens ... 32 1.7
X63692-1|CAA45219.1| 1616|Homo sapiens DNA (cytosine-5-)-methylt... 31 3.9
BC126227-1|AAI26228.1| 1632|Homo sapiens DNMT1 protein protein. 31 3.9
BC092517-1|AAH92517.1| 1511|Homo sapiens DNMT1 protein protein. 31 3.9
AF180682-1|AAF23609.1| 1280|Homo sapiens DNA (cytosine-5)-methyl... 31 3.9
AB209413-1|BAD92650.1| 1606|Homo sapiens DNA (cytosine-5-)-methy... 31 3.9
>CR533538-1|CAG38569.1| 315|Homo sapiens PTD012 protein.
Length = 315
Score = 78.6 bits (185), Expect = 1e-14
Identities = 35/83 (42%), Positives = 51/83 (61%)
Frame = +3
Query: 222 EKELYTPPLDEVACVLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAXLVEIGG 401
E + P L+E+A V+ GL NF V+VSV D PDLT+ P+ G+ G + E+GG
Sbjct: 5 EFSFHAPSLEELAGVMQKGLKDNFADVQVSVVDCPDLTKEPFTFPVKGICGKTRIAEVGG 64
Query: 402 PPYLVPQVKRDKIYDLAKLLEHL 470
PYL+P V + K+YDL K+ + +
Sbjct: 65 VPYLLPLVNQKKVYDLNKIAKEI 87
>BC012298-1|AAH12298.1| 265|Homo sapiens chromosome 11 open reading
frame 54 protein.
Length = 265
Score = 78.6 bits (185), Expect = 1e-14
Identities = 35/83 (42%), Positives = 51/83 (61%)
Frame = +3
Query: 222 EKELYTPPLDEVACVLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAXLVEIGG 401
E + P L+E+A V+ GL NF V+VSV D PDLT+ P+ G+ G + E+GG
Sbjct: 5 EFSFHVPSLEELAGVMQKGLKDNFADVQVSVVDCPDLTKEPFTFPVKGICGKTRIAEVGG 64
Query: 402 PPYLVPQVKRDKIYDLAKLLEHL 470
PYL+P V + K+YDL K+ + +
Sbjct: 65 VPYLLPLVNQKKVYDLNKIAKEI 87
>AL136605-1|CAB66540.1| 315|Homo sapiens hypothetical protein
protein.
Length = 315
Score = 78.6 bits (185), Expect = 1e-14
Identities = 35/83 (42%), Positives = 51/83 (61%)
Frame = +3
Query: 222 EKELYTPPLDEVACVLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAXLVEIGG 401
E + P L+E+A V+ GL NF V+VSV D PDLT+ P+ G+ G + E+GG
Sbjct: 5 EFSFHVPSLEELAGVMQKGLKDNFADVQVSVVDCPDLTKEPFTFPVKGICGKTRIAEVGG 64
Query: 402 PPYLVPQVKRDKIYDLAKLLEHL 470
PYL+P V + K+YDL K+ + +
Sbjct: 65 VPYLLPLVNQKKVYDLNKIAKEI 87
>BC007110-1|AAH07110.2| 310|Homo sapiens C11orf54 protein protein.
Length = 310
Score = 69.3 bits (162), Expect = 9e-12
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +3
Query: 264 VLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAXLVEIGGPPYLVPQVKRDKIY 443
V+ GL NF V+VSV D PDLT+ P+ G+ G + E+GG PYL+P V + K+Y
Sbjct: 14 VMQKGLKDNFADVQVSVVDCPDLTKEPFTFPVKGICGKTRIAEVGGVPYLLPLVNQKKVY 73
Query: 444 DLAKLLEHL 470
DL K+ + +
Sbjct: 74 DLNKIAKEI 82
>AK130578-1|BAC85386.1| 241|Homo sapiens protein ( Homo sapiens
cDNA FLJ27068 fis, clone SPL01475. ).
Length = 241
Score = 31.9 bits (69), Expect = 1.7
Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Frame = -1
Query: 541 PSQFTPRYGHGPAPAPARKAGSRFKC----SSSLARSYILSRLTC-GTKYGGPPISTSXA 377
P Q GHGP P P + G C +SS R + R TC G G + T A
Sbjct: 104 PGQSRMLEGHGPWPTPGSRPGPTCVCLLTPASSSLRPCLSDRGTCPGAPQGA--VGTCRA 161
Query: 376 SPVNP 362
SP +P
Sbjct: 162 SPQSP 166
>X63692-1|CAA45219.1| 1616|Homo sapiens DNA
(cytosine-5-)-methyltransferase protein.
Length = 1616
Score = 30.7 bits (66), Expect = 3.9
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +3
Query: 195 IDYTKVTIKEKELYTPPLDEVACVLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTG 374
+D+ V + Y L E V S G F F+E A S +PP + +SPG G
Sbjct: 1051 VDFKAVQGRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKG 1110
>BC126227-1|AAI26228.1| 1632|Homo sapiens DNMT1 protein protein.
Length = 1632
Score = 30.7 bits (66), Expect = 3.9
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +3
Query: 195 IDYTKVTIKEKELYTPPLDEVACVLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTG 374
+D+ V + Y L E V S G F F+E A S +PP + +SPG G
Sbjct: 1067 VDFKAVQGRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKG 1126
>BC092517-1|AAH92517.1| 1511|Homo sapiens DNMT1 protein protein.
Length = 1511
Score = 30.7 bits (66), Expect = 3.9
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +3
Query: 195 IDYTKVTIKEKELYTPPLDEVACVLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTG 374
+D+ V + Y L E V S G F F+E A S +PP + +SPG G
Sbjct: 946 VDFKAVQGRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKG 1005
>AF180682-1|AAF23609.1| 1280|Homo sapiens DNA
(cytosine-5)-methyltransferase protein.
Length = 1280
Score = 30.7 bits (66), Expect = 3.9
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +3
Query: 195 IDYTKVTIKEKELYTPPLDEVACVLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTG 374
+D+ V + Y L E V S G F F+E A S +PP + +SPG G
Sbjct: 715 VDFKAVQGRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKG 774
>AB209413-1|BAD92650.1| 1606|Homo sapiens DNA
(cytosine-5-)-methyltransferase 1 variant protein.
Length = 1606
Score = 30.7 bits (66), Expect = 3.9
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +3
Query: 195 IDYTKVTIKEKELYTPPLDEVACVLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTG 374
+D+ V + Y L E V S G F F+E A S +PP + +SPG G
Sbjct: 1038 VDFKAVQGRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKG 1097
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,501,076
Number of Sequences: 237096
Number of extensions: 1758857
Number of successful extensions: 4732
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4725
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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