Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12c11f
         (618 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50475-1|AAA93477.1|  207|Anopheles gambiae protein ( Anopheles ...    26   1.1  
AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein p...    23   6.0  

>U50475-1|AAA93477.1|  207|Anopheles gambiae protein ( Anopheles
           gambiae putativearylphorin precursor, mRNA, partial cds.
           ).
          Length = 207

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 20/61 (32%), Positives = 27/61 (44%)
 Frame = +2

Query: 239 PMQYINFYTDENVRRNRAPLPPRPIHDSYSMFGNSFNADDAIIRSLESQGFRRLYPMHFE 418
           PMQ  + Y D  V   +  L  +P   SY+M   S     AIIR+     F R + + F 
Sbjct: 144 PMQSADKYFDYAVFARQRRLNHKPF--SYTMNVMSDYTGKAIIRAFVGPKFDRFFDLQFY 201

Query: 419 R 421
           R
Sbjct: 202 R 202


>AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein
           protein.
          Length = 234

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 332 FGNSFNADDAIIRSLESQGFRRLYP 406
           F    NAD+  +   ++ GFRRL P
Sbjct: 199 FEGQMNADNIEVGICDANGFRRLDP 223


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 558,335
Number of Sequences: 2352
Number of extensions: 10264
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)