Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12c11f
(618 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029406-1|ABK57063.1| 245|Drosophila melanogaster IP02356p pro... 146 2e-35
BT023304-1|AAY55720.1| 220|Drosophila melanogaster IP02353p pro... 146 2e-35
AF293979-1|AAG02229.1| 220|Drosophila melanogaster transcriptio... 146 2e-35
AE014297-1185|AAN13483.1| 220|Drosophila melanogaster CG31390-P... 146 2e-35
M33753-1|AAA28428.1| 2146|Drosophila melanogaster crumbs protein... 30 2.9
AE014297-3522|AAF56276.1| 2146|Drosophila melanogaster CG6383-PA... 30 2.9
AE014297-3521|ABI31202.1| 2189|Drosophila melanogaster CG6383-PB... 30 2.9
AY069520-1|AAL39665.1| 1239|Drosophila melanogaster LD23793p pro... 29 6.6
AY069223-1|AAL39368.1| 616|Drosophila melanogaster GH27072p pro... 29 6.6
AE013599-458|AAM71100.1| 616|Drosophila melanogaster CG2092-PC,... 29 6.6
AE013599-456|AAF59225.3| 1239|Drosophila melanogaster CG2092-PB,... 29 6.6
BT025952-1|ABG02196.1| 93|Drosophila melanogaster IP15265p pro... 28 8.8
>BT029406-1|ABK57063.1| 245|Drosophila melanogaster IP02356p
protein.
Length = 245
Score = 146 bits (355), Expect = 2e-35
Identities = 74/140 (52%), Positives = 91/140 (65%), Gaps = 2/140 (1%)
Frame = +2
Query: 203 SETAQVSSLPLPPMQYINFYTDENVRRNRAPLPPRP--IHDSYSMFGNSFNADDAIIRSL 376
++ QVSSLP+PP +YI YTDEN+RRNRAP PP P H+ YSMFG +N +D +IRSL
Sbjct: 28 NQETQVSSLPMPPERYIANYTDENIRRNRAPRPPPPPAQHEVYSMFGIQYN-NDEMIRSL 86
Query: 377 ESQGFRRLYPMHFERRRELKKXXXXXXXXXXXXXXXXVHCPDSPKRAEKVEDXXXXXXXX 556
ESQ +RL P+HF+RR+ELKK + PDSP+R EK++D
Sbjct: 87 ESQNIKRLIPIHFDRRKELKKLNHSLLVNFLDLIDFLILNPDSPRRTEKIDDISLLFVNM 146
Query: 557 XXXXNEFRPHQARETLRVMM 616
NEFRPHQARETLRVMM
Sbjct: 147 HHLLNEFRPHQARETLRVMM 166
>BT023304-1|AAY55720.1| 220|Drosophila melanogaster IP02353p
protein.
Length = 220
Score = 146 bits (355), Expect = 2e-35
Identities = 74/140 (52%), Positives = 91/140 (65%), Gaps = 2/140 (1%)
Frame = +2
Query: 203 SETAQVSSLPLPPMQYINFYTDENVRRNRAPLPPRP--IHDSYSMFGNSFNADDAIIRSL 376
++ QVSSLP+PP +YI YTDEN+RRNRAP PP P H+ YSMFG +N +D +IRSL
Sbjct: 3 NQETQVSSLPMPPERYIANYTDENIRRNRAPRPPPPPAQHEVYSMFGIQYN-NDEMIRSL 61
Query: 377 ESQGFRRLYPMHFERRRELKKXXXXXXXXXXXXXXXXVHCPDSPKRAEKVEDXXXXXXXX 556
ESQ +RL P+HF+RR+ELKK + PDSP+R EK++D
Sbjct: 62 ESQNIKRLIPIHFDRRKELKKLNHSLLVNFLDLIDFLILNPDSPRRTEKIDDISLLFVNM 121
Query: 557 XXXXNEFRPHQARETLRVMM 616
NEFRPHQARETLRVMM
Sbjct: 122 HHLLNEFRPHQARETLRVMM 141
>AF293979-1|AAG02229.1| 220|Drosophila melanogaster transcriptional
coactivator MED7 protein.
Length = 220
Score = 146 bits (355), Expect = 2e-35
Identities = 74/140 (52%), Positives = 91/140 (65%), Gaps = 2/140 (1%)
Frame = +2
Query: 203 SETAQVSSLPLPPMQYINFYTDENVRRNRAPLPPRP--IHDSYSMFGNSFNADDAIIRSL 376
++ QVSSLP+PP +YI YTDEN+RRNRAP PP P H+ YSMFG +N +D +IRSL
Sbjct: 3 NQETQVSSLPMPPERYIANYTDENIRRNRAPRPPPPPAQHEVYSMFGIQYN-NDEMIRSL 61
Query: 377 ESQGFRRLYPMHFERRRELKKXXXXXXXXXXXXXXXXVHCPDSPKRAEKVEDXXXXXXXX 556
ESQ +RL P+HF+RR+ELKK + PDSP+R EK++D
Sbjct: 62 ESQNIKRLIPIHFDRRKELKKLNHSLLVNFLDLIDFLILNPDSPRRTEKIDDISLLFVNM 121
Query: 557 XXXXNEFRPHQARETLRVMM 616
NEFRPHQARETLRVMM
Sbjct: 122 HHLLNEFRPHQARETLRVMM 141
>AE014297-1185|AAN13483.1| 220|Drosophila melanogaster CG31390-PA
protein.
Length = 220
Score = 146 bits (355), Expect = 2e-35
Identities = 74/140 (52%), Positives = 91/140 (65%), Gaps = 2/140 (1%)
Frame = +2
Query: 203 SETAQVSSLPLPPMQYINFYTDENVRRNRAPLPPRP--IHDSYSMFGNSFNADDAIIRSL 376
++ QVSSLP+PP +YI YTDEN+RRNRAP PP P H+ YSMFG +N +D +IRSL
Sbjct: 3 NQETQVSSLPMPPERYIANYTDENIRRNRAPRPPPPPAQHEVYSMFGIQYN-NDEMIRSL 61
Query: 377 ESQGFRRLYPMHFERRRELKKXXXXXXXXXXXXXXXXVHCPDSPKRAEKVEDXXXXXXXX 556
ESQ +RL P+HF+RR+ELKK + PDSP+R EK++D
Sbjct: 62 ESQNIKRLIPIHFDRRKELKKLNHSLLVNFLDLIDFLILNPDSPRRTEKIDDISLLFVNM 121
Query: 557 XXXXNEFRPHQARETLRVMM 616
NEFRPHQARETLRVMM
Sbjct: 122 HHLLNEFRPHQARETLRVMM 141
>M33753-1|AAA28428.1| 2146|Drosophila melanogaster crumbs protein
protein.
Length = 2146
Score = 29.9 bits (64), Expect = 2.9
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
Frame = +2
Query: 74 FKINFFNLTQYLRVCKSFFVNIGIFRFY*VFARIVRTDSRFTMSETAQVSSLPLPPMQYI 253
FK + NL ++ S F N + I D+ + + L P +Q++
Sbjct: 176 FKYEYGNLYLHVDRAASIFANSTYNSQFLTNQDIGYKDAILILGNSFSGCLLDGPGLQFV 235
Query: 254 NFYTDENVRRNRAPLPPRPI--HDSYSMFGNSFNADD 358
N T +NV PL P P HD ++ ++F +D
Sbjct: 236 NNSTVQNVVFGHCPLTPGPCSDHDLFTRLPDNFCLND 272
>AE014297-3522|AAF56276.1| 2146|Drosophila melanogaster CG6383-PA,
isoform A protein.
Length = 2146
Score = 29.9 bits (64), Expect = 2.9
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
Frame = +2
Query: 74 FKINFFNLTQYLRVCKSFFVNIGIFRFY*VFARIVRTDSRFTMSETAQVSSLPLPPMQYI 253
FK + NL ++ S F N + I D+ + + L P +Q++
Sbjct: 176 FKYEYGNLYLHVDRAASIFANSTYNSQFLTNQDIGYKDAILILGNSFSGCLLDGPGLQFV 235
Query: 254 NFYTDENVRRNRAPLPPRPI--HDSYSMFGNSFNADD 358
N T +NV PL P P HD ++ ++F +D
Sbjct: 236 NNSTVQNVVFGHCPLTPGPCSDHDLFTRLPDNFCLND 272
>AE014297-3521|ABI31202.1| 2189|Drosophila melanogaster CG6383-PB,
isoform B protein.
Length = 2189
Score = 29.9 bits (64), Expect = 2.9
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
Frame = +2
Query: 74 FKINFFNLTQYLRVCKSFFVNIGIFRFY*VFARIVRTDSRFTMSETAQVSSLPLPPMQYI 253
FK + NL ++ S F N + I D+ + + L P +Q++
Sbjct: 176 FKYEYGNLYLHVDRAASIFANSTYNSQFLTNQDIGYKDAILILGNSFSGCLLDGPGLQFV 235
Query: 254 NFYTDENVRRNRAPLPPRPI--HDSYSMFGNSFNADD 358
N T +NV PL P P HD ++ ++F +D
Sbjct: 236 NNSTVQNVVFGHCPLTPGPCSDHDLFTRLPDNFCLND 272
>AY069520-1|AAL39665.1| 1239|Drosophila melanogaster LD23793p
protein.
Length = 1239
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 236 PPMQYINFYTDENVRRNRAPLPPRPIHDSYSMFGNSFNADDAIIRSLESQGFRR 397
PP +++ + APLPP+ + D ++ SLE+QGF+R
Sbjct: 233 PPKPHLS---SRRAEKGPAPLPPKKDEVDEASRTKQLKWDPKVLSSLEAQGFQR 283
>AY069223-1|AAL39368.1| 616|Drosophila melanogaster GH27072p
protein.
Length = 616
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 236 PPMQYINFYTDENVRRNRAPLPPRPIHDSYSMFGNSFNADDAIIRSLESQGFRR 397
PP +++ + APLPP+ + D ++ SLE+QGF+R
Sbjct: 233 PPKPHLS---SRRAEKGPAPLPPKKDEVDEASRTKQLKWDPKVLSSLEAQGFQR 283
>AE013599-458|AAM71100.1| 616|Drosophila melanogaster CG2092-PC,
isoform C protein.
Length = 616
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 236 PPMQYINFYTDENVRRNRAPLPPRPIHDSYSMFGNSFNADDAIIRSLESQGFRR 397
PP +++ + APLPP+ + D ++ SLE+QGF+R
Sbjct: 233 PPKPHLS---SRRAEKGPAPLPPKKDEVDEASRTKQLKWDPKVLSSLEAQGFQR 283
>AE013599-456|AAF59225.3| 1239|Drosophila melanogaster CG2092-PB,
isoform B protein.
Length = 1239
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 236 PPMQYINFYTDENVRRNRAPLPPRPIHDSYSMFGNSFNADDAIIRSLESQGFRR 397
PP +++ + APLPP+ + D ++ SLE+QGF+R
Sbjct: 233 PPKPHLS---SRRAEKGPAPLPPKKDEVDEASRTKQLKWDPKVLSSLEAQGFQR 283
>BT025952-1|ABG02196.1| 93|Drosophila melanogaster IP15265p
protein.
Length = 93
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +2
Query: 203 SETAQVSSLPLPPMQYINFYTDENVRRNRAPLPPRPIHDSYSMFGNSFNADDAIIR 370
S + + SSL LP ++FY + R L P P + +S ++ ++I+R
Sbjct: 30 SRSERASSLALPLNSLLDFYDKQQERCKSVTLLPLPSNSGSISESSSLSSSNSIVR 85
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,798,995
Number of Sequences: 53049
Number of extensions: 413908
Number of successful extensions: 870
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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