Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12c09r
         (746 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.5  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   7.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   7.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/55 (18%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
 Frame = -1

Query: 341  WTELQCRWPQGWRC--PRTRALENITKPTLVDKYILLSQPNSVYRESISIVEITC 183
            W +  C WP+   C    +  +   T P + DK +  +    +  ++    ++ C
Sbjct: 2271 WNKDHCDWPENTECHPDASSTMAPSTTPMVPDKPVTTTTSRPIGTDTSDDYKVVC 2325


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 327 MQVATRLALPSNSSPRKYNQTYSC 256
           ++   RLA P+N SP  Y    +C
Sbjct: 707 LKSGNRLARPANCSPDLYAVMLNC 730


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -2

Query: 250 NTYCCHNQTACIENQS 203
           +T  C NQ  C++N++
Sbjct: 104 STNPCENQATCVQNKN 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,667
Number of Sequences: 336
Number of extensions: 4424
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)