Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12c08f
         (551 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7R1E2 Cluster: GLP_306_19898_9507; n=1; Giardia lambli...    35   1.4  
UniRef50_O74643 Cluster: Cytochrome P450; n=2; Agaricomycetes|Re...    34   1.9  
UniRef50_A2F471 Cluster: Putative uncharacterized protein; n=1; ...    33   3.3  
UniRef50_Q11PV1 Cluster: Putative uncharacterized protein; n=1; ...    33   4.4  
UniRef50_Q99680 Cluster: Probable G-protein coupled receptor 22;...    33   4.4  
UniRef50_UPI00015A6729 Cluster: Attractin precursor (Mahogany ho...    32   7.7  
UniRef50_Q22MQ7 Cluster: Protein kinase domain containing protei...    32   7.7  

>UniRef50_Q7R1E2 Cluster: GLP_306_19898_9507; n=1; Giardia lamblia
            ATCC 50803|Rep: GLP_306_19898_9507 - Giardia lamblia ATCC
            50803
          Length = 3463

 Score = 34.7 bits (76), Expect = 1.4
 Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
 Frame = +3

Query: 42   VVSNNANFLLKIYENK*FG*LNFCVLRFVYTINNKT--IIVGVCGELRAVLSIGNVLTMV 215
            ++S + N + K+ E    G + F  + F+  + + T  +IVG     ++VL    + T +
Sbjct: 3288 MISKHGNLVRKLLERLYGGSIIFDAIIFLLFLISLTAYLIVGCVFVYKSVLLTVRMYTKI 3347

Query: 216  LHVTNMCCGIKLRTICFV-IAYLHLVSCVLDIAFHLLTVAIVTD 344
              VT   C IK    CF+ +  + LV  +L +A  ++++ I+ D
Sbjct: 3348 SAVTRCACSIKYLVSCFLPLDLMFLVPALLVVAL-IMSLPIIYD 3390


>UniRef50_O74643 Cluster: Cytochrome P450; n=2; Agaricomycetes|Rep:
           Cytochrome P450 - Coprinus cinereus (Inky cap fungus)
           (Hormographiella aspergillata)
          Length = 524

 Score = 34.3 bits (75), Expect = 1.9
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = -3

Query: 105 LTSQIIYFRKFLTGSLRCSTPPHEKPVRVITN 10
           L + IIYFRKF     R   PP  KP+ V+ N
Sbjct: 16  LVASIIYFRKFKANPARAHLPPGPKPIPVLGN 47


>UniRef50_A2F471 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 582

 Score = 33.5 bits (73), Expect = 3.3
 Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
 Frame = +3

Query: 114 VLRFVYTINNKTIIVGVCGELRAVLSIGNVLTMVLHVTNMCCGI--KLRTICF-VIAYLH 284
           +LRFV    N+++++G C  +    S+  + +   +    C  I  ++ +IC  +I YL 
Sbjct: 272 ILRFVEL--NESLVLGFCNFIGNKASVSLMQSTSRNNIINCVFIDNQVTSICTGLITYLQ 329

Query: 285 LVSCVLDIAFHLLTVAIV-TDGFQCDVN 365
           +  CVLD+ +    +A + T G + D N
Sbjct: 330 MTDCVLDVKYSFFGLAYIRTPGIKFDEN 357


>UniRef50_Q11PV1 Cluster: Putative uncharacterized protein; n=1;
           Cytophaga hutchinsonii ATCC 33406|Rep: Putative
           uncharacterized protein - Cytophaga hutchinsonii (strain
           ATCC 33406 / NCIMB 9469)
          Length = 133

 Score = 33.1 bits (72), Expect = 4.4
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = -3

Query: 102 TSQIIYFRKFLTGSLRCSTPPH 37
           TSQI Y  + LTGS+ C+ PPH
Sbjct: 97  TSQISYASEILTGSVTCNAPPH 118


>UniRef50_Q99680 Cluster: Probable G-protein coupled receptor 22;
           n=27; Euteleostomi|Rep: Probable G-protein coupled
           receptor 22 - Homo sapiens (Human)
          Length = 433

 Score = 33.1 bits (72), Expect = 4.4
 Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
 Frame = +3

Query: 108 FCVLRFVYTI-NNKTIIVGVCGELRAVLSIGNVLTMVLHVTNMCCGIKLRTICFVIAYLH 284
           F +L  V  + +N T++V  C +   + S+ N++TM LHV ++   +    +  VI  L 
Sbjct: 47  FLMLEIVLGLGSNLTVLVLYCMKSNLINSVSNIITMNLHVLDVIICVGCIPLTIVILLLS 106

Query: 285 LVS-CVLDIAFHLLTVAIVT 341
           L S   L   FH   V+  +
Sbjct: 107 LESNTALICCFHEACVSFAS 126


>UniRef50_UPI00015A6729 Cluster: Attractin precursor (Mahogany
           homolog) (DPPT-L).; n=2; Danio rerio|Rep: Attractin
           precursor (Mahogany homolog) (DPPT-L). - Danio rerio
          Length = 1324

 Score = 32.3 bits (70), Expect = 7.7
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 157 WVCVVNCVQFFQLETFSQWFYTLLTCAVESNYALYVSSSLICIW 288
           WV   +   FF LE FS  F  L    + +  A +  S+++C+W
Sbjct: 630 WVSFSSVFGFFTLERFSNCFLPLFPLRISAPTAGHSVSAVVCVW 673


>UniRef50_Q22MQ7 Cluster: Protein kinase domain containing protein;
           n=1; Tetrahymena thermophila SB210|Rep: Protein kinase
           domain containing protein - Tetrahymena thermophila
           SB210
          Length = 1349

 Score = 32.3 bits (70), Expect = 7.7
 Identities = 22/73 (30%), Positives = 39/73 (53%)
 Frame = -1

Query: 341 SDNSNCQQMKRYIQDTRHQMQISDDETYSA*FDSTAHVSNV*NHCENVSN*KNCTQFTTH 162
           ++NS  + MK+  +D   + QI+D++  +    S +H + V  +C N++      QF+  
Sbjct: 467 NENSYIEYMKKDQKDETVKSQINDNQVLNI-ISSFSH-NGVQANCNNLA------QFSQL 518

Query: 161 THNNSFIVDCIYK 123
            HNNSF  D  Y+
Sbjct: 519 NHNNSFTEDVFYE 531


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 602,017,914
Number of Sequences: 1657284
Number of extensions: 12541413
Number of successful extensions: 28779
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 27866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28763
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36238783989
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)