Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12c08f
         (551 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    24   0.77 
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    24   0.77 
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    24   0.77 
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   1.3  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   3.1  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   3.1  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   4.1  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   4.1  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   5.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   9.5  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.5  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.5  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 0.77
 Identities = 13/61 (21%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = +3

Query: 120 RFVYTIN-NKTIIVGVCGELRAVLSIGNVLTMVLHVTNMCCGIKLRTICFVIAYLHLVSC 296
           RF   +N +K +   +   L  ++S+G ++  V+ +  +   ++  T+    AYLH+++ 
Sbjct: 109 RFDILLNKSKNLQFPLLSTLIIIISLGCLILAVVFLLTLSALLEGFTLYHTTAYLHIITM 168

Query: 297 V 299
           +
Sbjct: 169 I 169


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 0.77
 Identities = 13/61 (21%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = +3

Query: 120 RFVYTIN-NKTIIVGVCGELRAVLSIGNVLTMVLHVTNMCCGIKLRTICFVIAYLHLVSC 296
           RF   +N +K +   +   L  ++S+G ++  V+ +  +   ++  T+    AYLH+++ 
Sbjct: 109 RFDILLNKSKNLQFPLLSTLIIIISLGCLILAVVFLLTLSALLEGFTLYHTTAYLHIITM 168

Query: 297 V 299
           +
Sbjct: 169 I 169


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 0.77
 Identities = 13/61 (21%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = +3

Query: 120 RFVYTIN-NKTIIVGVCGELRAVLSIGNVLTMVLHVTNMCCGIKLRTICFVIAYLHLVSC 296
           RF   +N +K +   +   L  ++S+G ++  V+ +  +   ++  T+    AYLH+++ 
Sbjct: 109 RFDILLNKSKNLQFPLLSTLIIIISLGCLILAVVFLLTLSALLEGFTLYHTTAYLHIITM 168

Query: 297 V 299
           +
Sbjct: 169 I 169


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 471 QYNMYVEYTSIIAEPRCYPGILHV 542
           QYN+ + YT I+++   Y GIL V
Sbjct: 234 QYNVILRYTKIVSD--TYQGILVV 255


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 217 YTLLTCAVESNYALYVSSSLICIWCLV 297
           Y+L   A   N +L ++  LI I C V
Sbjct: 71  YSLFRIATNENNSLVINKRLIFIECFV 97


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 217 YTLLTCAVESNYALYVSSSLICIWCLV 297
           Y+L   A   N +L ++  LI I C V
Sbjct: 71  YSLFRIATNENNSLVINKRLIFIECFV 97


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 231 MCCGIKLRTICFVIAYLHLVSCV 299
           + CGI +      I++ +L+SCV
Sbjct: 528 IACGIMILVANVAISFGYLISCV 550


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 231 MCCGIKLRTICFVIAYLHLVSCV 299
           + CGI +      I++ +L+SCV
Sbjct: 528 IACGIMILVANVAISFGYLISCV 550


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 423 LEPGVKAPQPPRV 385
           L+PG K+P  PR+
Sbjct: 60  LDPGRKSPSSPRI 72


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +2

Query: 176  ACSSFNWKRSHNGSTRY*HVLWNQ 247
            ACS   +       TRY H LW +
Sbjct: 1278 ACSENAFAAYPGDCTRYLHCLWGK 1301


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -2

Query: 238 QHMLVTCRTIVRTFPIERTARNSPHTP 158
           + +++   T  RTF +  TA+   H P
Sbjct: 325 EKLVIGMPTYGRTFTLSNTAKFGVHAP 351


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 500 RCVLNIHIVLTPKCPREWV 444
           R V  I  +LT + PR W+
Sbjct: 201 RAVYKIGQLLTYRAPRPWI 219


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/42 (21%), Positives = 19/42 (45%)
 Frame = +3

Query: 318 LLTVAIVTDGFQCDVNYDKFSAIPWAVVEPLLLVLNLGTHGF 443
           L  VA     F CD+N  ++  +    +  L+   ++ T+ +
Sbjct: 365 LFPVAGFISDFDCDINSIQYFCLMARCLNTLIFYYHISTYEY 406


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 500 RCVLNIHIVLTPKCPREWV 444
           R V  I  +LT + PR W+
Sbjct: 201 RAVYKIGQLLTYRAPRPWI 219


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,699
Number of Sequences: 336
Number of extensions: 3560
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)