Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12c08f
(551 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061353-1|AAL28901.1| 687|Drosophila melanogaster LD28117p pro... 30 1.8
AE014298-2173|AAF48473.2| 687|Drosophila melanogaster CG9213-PA... 30 1.8
L26502-1|AAB58976.1| 2764|Drosophila melanogaster neurofibromin ... 29 4.2
L26501-1|AAB58975.1| 2802|Drosophila melanogaster neurofibromin ... 29 4.2
L26500-1|AAB58977.1| 2802|Drosophila melanogaster neurofibromin ... 29 4.2
AE014297-3891|AAF56543.3| 2802|Drosophila melanogaster CG8318-PB... 29 4.2
AE014297-3890|AAX52994.1| 2764|Drosophila melanogaster CG8318-PD... 29 4.2
AE014297-3889|AAN14067.2| 2746|Drosophila melanogaster CG8318-PC... 29 4.2
D42125-1|BAA07705.1| 517|Drosophila melanogaster Dsrc41 protein. 28 7.3
BT016017-1|AAV36902.1| 235|Drosophila melanogaster RE19378p pro... 28 7.3
AY058652-1|AAL13881.1| 517|Drosophila melanogaster LD35329p pro... 28 7.3
AE013599-127|AAM68337.1| 517|Drosophila melanogaster CG7873-PB,... 28 7.3
AE013599-126|AAF57295.1| 517|Drosophila melanogaster CG7873-PA,... 28 7.3
>AY061353-1|AAL28901.1| 687|Drosophila melanogaster LD28117p
protein.
Length = 687
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 459 SPGMGRSRGFRGLEPGVKAPQPPR 388
S G SRG+R +PG KAP PPR
Sbjct: 228 SSAQGSSRGWR--KPGAKAPSPPR 249
>AE014298-2173|AAF48473.2| 687|Drosophila melanogaster CG9213-PA
protein.
Length = 687
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 459 SPGMGRSRGFRGLEPGVKAPQPPR 388
S G SRG+R +PG KAP PPR
Sbjct: 228 SSAQGSSRGWR--KPGAKAPSPPR 249
>L26502-1|AAB58976.1| 2764|Drosophila melanogaster neurofibromin
protein.
Length = 2764
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 187 FQLETFSQWFYTLLTCAVESNYALYV 264
F+ E +WFY L T A E+ +A+Y+
Sbjct: 1685 FRTEFLQKWFYVLPTVAYENVHAVYI 1710
>L26501-1|AAB58975.1| 2802|Drosophila melanogaster neurofibromin
protein.
Length = 2802
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 187 FQLETFSQWFYTLLTCAVESNYALYV 264
F+ E +WFY L T A E+ +A+Y+
Sbjct: 1685 FRTEFLQKWFYVLPTVAYENVHAVYI 1710
>L26500-1|AAB58977.1| 2802|Drosophila melanogaster neurofibromin
protein.
Length = 2802
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 187 FQLETFSQWFYTLLTCAVESNYALYV 264
F+ E +WFY L T A E+ +A+Y+
Sbjct: 1685 FRTEFLQKWFYVLPTVAYENVHAVYI 1710
>AE014297-3891|AAF56543.3| 2802|Drosophila melanogaster CG8318-PB,
isoform B protein.
Length = 2802
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 187 FQLETFSQWFYTLLTCAVESNYALYV 264
F+ E +WFY L T A E+ +A+Y+
Sbjct: 1685 FRTEFLQKWFYVLPTVAYENVHAVYI 1710
>AE014297-3890|AAX52994.1| 2764|Drosophila melanogaster CG8318-PD,
isoform D protein.
Length = 2764
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 187 FQLETFSQWFYTLLTCAVESNYALYV 264
F+ E +WFY L T A E+ +A+Y+
Sbjct: 1685 FRTEFLQKWFYVLPTVAYENVHAVYI 1710
>AE014297-3889|AAN14067.2| 2746|Drosophila melanogaster CG8318-PC,
isoform C protein.
Length = 2746
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 187 FQLETFSQWFYTLLTCAVESNYALYV 264
F+ E +WFY L T A E+ +A+Y+
Sbjct: 1685 FRTEFLQKWFYVLPTVAYENVHAVYI 1710
>D42125-1|BAA07705.1| 517|Drosophila melanogaster Dsrc41 protein.
Length = 517
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 363 NYDKFSAIPWAVVEPLLLVLNLGTHGFYPFPGTFRRQYNMYVEYTSIIAE-PRCYPGILH 539
NY KFS I V +L+ L T+G P+PG + VE+ + + P C P +
Sbjct: 419 NYSKFS-IKSDVWSFGILLTELVTYGRIPYPGMTNAEVLTQVEHGYRMPQPPNCEPRLYE 477
Query: 540 VYL 548
+ L
Sbjct: 478 IML 480
>BT016017-1|AAV36902.1| 235|Drosophila melanogaster RE19378p
protein.
Length = 235
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 363 NYDKFSAIPWAVVEPLLLVLNLGTHGFYPFPGTFRRQYNMYVEYTSIIAE-PRCYPGILH 539
NY KFS I V +L+ L T+G P+PG + VE+ + + P C P +
Sbjct: 137 NYSKFS-IKSDVWSFGILLTELVTYGRIPYPGMTNAEVLTQVEHGYRMPQPPNCEPRLYE 195
Query: 540 VYL 548
+ L
Sbjct: 196 IML 198
>AY058652-1|AAL13881.1| 517|Drosophila melanogaster LD35329p
protein.
Length = 517
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 363 NYDKFSAIPWAVVEPLLLVLNLGTHGFYPFPGTFRRQYNMYVEYTSIIAE-PRCYPGILH 539
NY KFS I V +L+ L T+G P+PG + VE+ + + P C P +
Sbjct: 419 NYSKFS-IKSDVWSFGILLTELVTYGRIPYPGMTNAEVLTQVEHGYRMPQPPNCEPRLYE 477
Query: 540 VYL 548
+ L
Sbjct: 478 IML 480
>AE013599-127|AAM68337.1| 517|Drosophila melanogaster CG7873-PB,
isoform B protein.
Length = 517
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 363 NYDKFSAIPWAVVEPLLLVLNLGTHGFYPFPGTFRRQYNMYVEYTSIIAE-PRCYPGILH 539
NY KFS I V +L+ L T+G P+PG + VE+ + + P C P +
Sbjct: 419 NYSKFS-IKSDVWSFGILLTELVTYGRIPYPGMTNAEVLTQVEHGYRMPQPPNCEPRLYE 477
Query: 540 VYL 548
+ L
Sbjct: 478 IML 480
>AE013599-126|AAF57295.1| 517|Drosophila melanogaster CG7873-PA,
isoform A protein.
Length = 517
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 363 NYDKFSAIPWAVVEPLLLVLNLGTHGFYPFPGTFRRQYNMYVEYTSIIAE-PRCYPGILH 539
NY KFS I V +L+ L T+G P+PG + VE+ + + P C P +
Sbjct: 419 NYSKFS-IKSDVWSFGILLTELVTYGRIPYPGMTNAEVLTQVEHGYRMPQPPNCEPRLYE 477
Query: 540 VYL 548
+ L
Sbjct: 478 IML 480
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,481,279
Number of Sequences: 53049
Number of extensions: 595509
Number of successful extensions: 1543
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1543
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2110522698
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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