Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12c07f
(596 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC065016-1|AAH65016.1| 797|Homo sapiens AFG3 ATPase family gene... 66 1e-10
BC024282-1|AAH24282.1| 812|Homo sapiens Similar to AFG3 ATPase ... 66 1e-10
Y18314-1|CAB48398.1| 797|Homo sapiens paraplegin-like protein p... 63 8e-10
BC045753-1|AAH45753.1| 125|Homo sapiens AFG3L1 protein protein. 44 3e-04
AK097044-1|BAC04933.1| 199|Homo sapiens protein ( Homo sapiens ... 44 3e-04
BC105104-1|AAI05105.1| 597|Homo sapiens unc-93 homolog B1 (C. e... 31 4.1
BC101568-1|AAI01569.1| 597|Homo sapiens unc-93 homolog B1 (C. e... 31 4.1
BC092472-1|AAH92472.1| 597|Homo sapiens unc-93 homolog B1 (C. e... 31 4.1
BC025669-1|AAH25669.1| 505|Homo sapiens UNC93B1 protein protein. 31 4.1
AJ422142-1|CAD19522.1| 497|Homo sapiens UNC-93B protein protein. 31 4.1
AJ271326-1|CAC19791.1| 597|Homo sapiens unc-93 related protein ... 31 4.1
BC033623-1|AAH33623.1| 505|Homo sapiens UNC93B1 protein protein. 30 5.4
>BC065016-1|AAH65016.1| 797|Homo sapiens AFG3 ATPase family gene
3-like 2 (yeast) protein.
Length = 797
Score = 65.7 bits (153), Expect = 1e-10
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 4/145 (2%)
Frame = +2
Query: 173 LDSVLRQWYEFCKKPPKGFEKYFQPG-SGQKDAKTQEKNXXXXXXXXXXXXXXXXXXXDK 349
L ++ + FC +PPKGFEKYF G +G+K ++ +E
Sbjct: 55 LTDIIAAYQRFCSRPPKGFEKYFPNGKNGKKASEPKEVMGEKKESKPAATTRSSGGGGGG 114
Query: 350 WNMNMFXXXXXXXXXXXXXXXYEGQDKEKWMMFGAIGIVTLLASVAYFELRYR---EISW 520
DK+ M F + V ++ L R EI+W
Sbjct: 115 GGKRGGKKDDSHWWSRFQKGDIPWDDKDFRMFF--LWTALFWGGVMFYLLLKRSGREITW 172
Query: 521 RDFVNLYLNKGVVEKLEVINKKWVR 595
+DFVN YL+KGVV++LEV+NK++VR
Sbjct: 173 KDFVNNYLSKGVVDRLEVVNKRFVR 197
>BC024282-1|AAH24282.1| 812|Homo sapiens Similar to AFG3 ATPase
family gene 3-like 2 (yeast) protein.
Length = 812
Score = 65.7 bits (153), Expect = 1e-10
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 4/145 (2%)
Frame = +2
Query: 173 LDSVLRQWYEFCKKPPKGFEKYFQPG-SGQKDAKTQEKNXXXXXXXXXXXXXXXXXXXDK 349
L ++ + FC +PPKGFEKYF G +G+K ++ +E
Sbjct: 70 LTDIIAAYQRFCSRPPKGFEKYFPNGKNGKKASEPKEVMGEKKESKPAATTRSSGGGGGG 129
Query: 350 WNMNMFXXXXXXXXXXXXXXXYEGQDKEKWMMFGAIGIVTLLASVAYFELRYR---EISW 520
DK+ M F + V ++ L R EI+W
Sbjct: 130 GGKRGGKKDDSHWWSRFQKGDIPWDDKDFRMFF--LWTALFWGGVMFYLLLKRSGREITW 187
Query: 521 RDFVNLYLNKGVVEKLEVINKKWVR 595
+DFVN YL+KGVV++LEV+NK++VR
Sbjct: 188 KDFVNNYLSKGVVDRLEVVNKRFVR 212
>Y18314-1|CAB48398.1| 797|Homo sapiens paraplegin-like protein
protein.
Length = 797
Score = 62.9 bits (146), Expect = 8e-10
Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 4/145 (2%)
Frame = +2
Query: 173 LDSVLRQWYEFCKKPPKGFEKYFQPG-SGQKDAKTQEKNXXXXXXXXXXXXXXXXXXXDK 349
L ++ + FC +PPKGF KYF G +G+K ++ +E
Sbjct: 55 LTDIIAAYQRFCSRPPKGFGKYFPNGKNGKKASEPKEVMGEKKESKPAATTRSSGGGGGG 114
Query: 350 WNMNMFXXXXXXXXXXXXXXXYEGQDKEKWMMFGAIGIVTLLASVAYFELRYR---EISW 520
DK+ M F + V ++ L R EI+W
Sbjct: 115 GGKRGGKKDDSHWWSRFQKGDIPWDDKDFRMFF--LWTALFWGGVMFYLLLKRSGREITW 172
Query: 521 RDFVNLYLNKGVVEKLEVINKKWVR 595
+DFVN YL+KGVV++LEV+NK++VR
Sbjct: 173 KDFVNNYLSKGVVDRLEVVNKRFVR 197
>BC045753-1|AAH45753.1| 125|Homo sapiens AFG3L1 protein protein.
Length = 125
Score = 44.4 bits (100), Expect = 3e-04
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +2
Query: 488 YFELRYREISWRDFVNLYLNKGVVEKLEVINKKWVR 595
YF REI+W+ FV YL +G+V++LEV+NK+ VR
Sbjct: 54 YFRDPGREITWKHFVQYYLARGLVDRLEVVNKQSVR 89
>AK097044-1|BAC04933.1| 199|Homo sapiens protein ( Homo sapiens
cDNA FLJ39725 fis, clone SMINT2015294, highly similar to
Mus musculus ATP-dependent zinc metalloprotease (Afg3l1)
mRNA. ).
Length = 199
Score = 44.4 bits (100), Expect = 3e-04
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +2
Query: 488 YFELRYREISWRDFVNLYLNKGVVEKLEVINKKWVR 595
YF REI+W+ FV YL +G+V++LEV+NK+ VR
Sbjct: 54 YFRDPGREITWKHFVQYYLARGLVDRLEVVNKQSVR 89
>BC105104-1|AAI05105.1| 597|Homo sapiens unc-93 homolog B1 (C.
elegans) protein.
Length = 597
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 434 KWMMFGAIGIVTLLASVAYFELRY 505
KWMMF A+GI L S Y+E Y
Sbjct: 136 KWMMFLAVGIYALFVSTNYWERYY 159
>BC101568-1|AAI01569.1| 597|Homo sapiens unc-93 homolog B1 (C.
elegans) protein.
Length = 597
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 434 KWMMFGAIGIVTLLASVAYFELRY 505
KWMMF A+GI L S Y+E Y
Sbjct: 136 KWMMFLAVGIYALFVSTNYWERYY 159
>BC092472-1|AAH92472.1| 597|Homo sapiens unc-93 homolog B1 (C.
elegans) protein.
Length = 597
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 434 KWMMFGAIGIVTLLASVAYFELRY 505
KWMMF A+GI L S Y+E Y
Sbjct: 136 KWMMFLAVGIYALFVSTNYWERYY 159
>BC025669-1|AAH25669.1| 505|Homo sapiens UNC93B1 protein protein.
Length = 505
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 434 KWMMFGAIGIVTLLASVAYFELRY 505
KWMMF A+GI L S Y+E Y
Sbjct: 136 KWMMFLAVGIYALFVSTNYWERYY 159
>AJ422142-1|CAD19522.1| 497|Homo sapiens UNC-93B protein protein.
Length = 497
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 434 KWMMFGAIGIVTLLASVAYFELRY 505
KWMMF A+GI L S Y+E Y
Sbjct: 136 KWMMFLAVGIYALFVSTNYWERYY 159
>AJ271326-1|CAC19791.1| 597|Homo sapiens unc-93 related protein
protein.
Length = 597
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 434 KWMMFGAIGIVTLLASVAYFELRY 505
KWMMF A+GI L S Y+E Y
Sbjct: 136 KWMMFLAVGIYALFVSTNYWERYY 159
>BC033623-1|AAH33623.1| 505|Homo sapiens UNC93B1 protein protein.
Length = 505
Score = 30.3 bits (65), Expect = 5.4
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 434 KWMMFGAIGIVTLLASVAYFELRYREI 514
KWMMF A+GI L S Y+E RY +
Sbjct: 136 KWMMFLAVGIYALFVSTNYWE-RYHTL 161
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,852,527
Number of Sequences: 237096
Number of extensions: 1210325
Number of successful extensions: 2295
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2295
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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