Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12c07f
         (596 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY084199-1|AAL89937.1|  826|Drosophila melanogaster SD01613p pro...    95   6e-20
AE014296-2879|AAN11704.1|  697|Drosophila melanogaster CG6512-PB...    95   6e-20
AE014296-2878|AAF49365.2|  826|Drosophila melanogaster CG6512-PA...    95   6e-20
X78113-1|CAA55003.1|  419|Drosophila melanogaster T48 protein.         29   6.3  
AY118853-1|AAM50713.1|  419|Drosophila melanogaster GM18993p pro...    29   6.3  
AE014297-4019|AAF56637.1|  419|Drosophila melanogaster CG5507-PA...    29   6.3  

>AY084199-1|AAL89937.1|  826|Drosophila melanogaster SD01613p
           protein.
          Length = 826

 Score = 95.1 bits (226), Expect = 6e-20
 Identities = 39/59 (66%), Positives = 51/59 (86%)
 Frame = +2

Query: 419 GQDKEKWMMFGAIGIVTLLASVAYFELRYREISWRDFVNLYLNKGVVEKLEVINKKWVR 595
           G D+E+W++ GAIG V L+ S A+FE+ Y+EISW++FVN YL+KGVVEKLEV+NKKWVR
Sbjct: 157 GGDRERWILLGAIGAVVLVGSFAFFEMGYKEISWKEFVNSYLSKGVVEKLEVVNKKWVR 215



 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 21/42 (50%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
 Frame = +2

Query: 167 PALDSVLRQWYEFCKKPPKGFEKYFQPG---SGQKDAKTQEK 283
           P L  V++Q    CKKPPKGFEKYF+ G   SGQ      +K
Sbjct: 50  PLLRYVVKQIQLLCKKPPKGFEKYFEAGGKSSGQPKGSVGDK 91


>AE014296-2879|AAN11704.1|  697|Drosophila melanogaster CG6512-PB,
           isoform B protein.
          Length = 697

 Score = 95.1 bits (226), Expect = 6e-20
 Identities = 39/59 (66%), Positives = 51/59 (86%)
 Frame = +2

Query: 419 GQDKEKWMMFGAIGIVTLLASVAYFELRYREISWRDFVNLYLNKGVVEKLEVINKKWVR 595
           G D+E+W++ GAIG V L+ S A+FE+ Y+EISW++FVN YL+KGVVEKLEV+NKKWVR
Sbjct: 28  GGDRERWILLGAIGAVVLVGSFAFFEMGYKEISWKEFVNSYLSKGVVEKLEVVNKKWVR 86


>AE014296-2878|AAF49365.2|  826|Drosophila melanogaster CG6512-PA,
           isoform A protein.
          Length = 826

 Score = 95.1 bits (226), Expect = 6e-20
 Identities = 39/59 (66%), Positives = 51/59 (86%)
 Frame = +2

Query: 419 GQDKEKWMMFGAIGIVTLLASVAYFELRYREISWRDFVNLYLNKGVVEKLEVINKKWVR 595
           G D+E+W++ GAIG V L+ S A+FE+ Y+EISW++FVN YL+KGVVEKLEV+NKKWVR
Sbjct: 157 GGDRERWILLGAIGAVVLVGSFAFFEMGYKEISWKEFVNSYLSKGVVEKLEVVNKKWVR 215



 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 21/42 (50%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
 Frame = +2

Query: 167 PALDSVLRQWYEFCKKPPKGFEKYFQPG---SGQKDAKTQEK 283
           P L  V++Q    CKKPPKGFEKYF+ G   SGQ      +K
Sbjct: 50  PLLRYVVKQIQLLCKKPPKGFEKYFEAGGKSSGQPKGSVGDK 91


>X78113-1|CAA55003.1|  419|Drosophila melanogaster T48 protein.
          Length = 419

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -3

Query: 222 LGGFLQNSYHCLKTESRA--GTPTGCNLCPLKCIFDSCECVNLRP 94
           L G LQNS   L T S        GC  CP+  + D+ +CV+  P
Sbjct: 82  LPGMLQNSGCPLTTSSHCLRCNKAGCIKCPMYLVTDTRQCVDQCP 126


>AY118853-1|AAM50713.1|  419|Drosophila melanogaster GM18993p
           protein.
          Length = 419

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -3

Query: 222 LGGFLQNSYHCLKTESRA--GTPTGCNLCPLKCIFDSCECVNLRP 94
           L G LQNS   L T S        GC  CP+  + D+ +CV+  P
Sbjct: 82  LPGMLQNSGCPLTTSSHCLRCNKVGCIKCPMYLVTDTRQCVDQCP 126


>AE014297-4019|AAF56637.1|  419|Drosophila melanogaster CG5507-PA
           protein.
          Length = 419

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -3

Query: 222 LGGFLQNSYHCLKTESRA--GTPTGCNLCPLKCIFDSCECVNLRP 94
           L G LQNS   L T S        GC  CP+  + D+ +CV+  P
Sbjct: 82  LPGMLQNSGCPLTTSSHCLRCNKVGCIKCPMYLVTDTRQCVDQCP 126


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,248,527
Number of Sequences: 53049
Number of extensions: 392325
Number of successful extensions: 814
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)