Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12c03f
(573 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC063479-1|AAH63479.1| 374|Homo sapiens LARP4 protein protein. 30 5.0
BC022377-1|AAH22377.1| 188|Homo sapiens LARP4 protein protein. 30 5.0
AY004310-1|AAF86614.1| 375|Homo sapiens c-Mpl binding protein p... 30 5.0
AP001745-3|BAA95529.1| 1066|Homo sapiens ZNF295 protein. 30 5.0
AK125113-1|BAC86052.1| 654|Homo sapiens protein ( Homo sapiens ... 30 5.0
AB041015-1|BAD74064.1| 865|Homo sapiens zinc finger protein sho... 30 5.0
AB041014-1|BAD74063.1| 1066|Homo sapiens zinc finger protein lon... 30 5.0
AB033053-1|BAA86541.1| 1069|Homo sapiens KIAA1227 protein protein. 30 5.0
BC063290-1|AAH63290.1| 1066|Homo sapiens zinc finger protein 295... 30 6.7
AY603755-1|AAT80901.1| 3094|Homo sapiens striated muscle prefere... 30 6.7
AB037718-1|BAA92535.1| 2242|Homo sapiens KIAA1297 protein protein. 30 6.7
>BC063479-1|AAH63479.1| 374|Homo sapiens LARP4 protein protein.
Length = 374
Score = 30.3 bits (65), Expect = 5.0
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 382 LSQNVDAAILGPDLLHAESTACSHENAVARLRQKLRNSKAGALQFCFRKPNLT 540
+ ++ D ILGP+ L + S E+ A + L+ L+FCF + NL+
Sbjct: 85 IEESTDGMILGPEDLSYQIYDVSGESNSAVSTEDLKECLKKQLEFCFSRENLS 137
>BC022377-1|AAH22377.1| 188|Homo sapiens LARP4 protein protein.
Length = 188
Score = 30.3 bits (65), Expect = 5.0
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 382 LSQNVDAAILGPDLLHAESTACSHENAVARLRQKLRNSKAGALQFCFRKPNLT 540
+ ++ D ILGP+ L + S E+ A + L+ L+FCF + NL+
Sbjct: 15 IEESTDGMILGPEDLSYQIYDVSGESNSAVSTEDLKECLKKQLEFCFSRENLS 67
>AY004310-1|AAF86614.1| 375|Homo sapiens c-Mpl binding protein
protein.
Length = 375
Score = 30.3 bits (65), Expect = 5.0
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 382 LSQNVDAAILGPDLLHAESTACSHENAVARLRQKLRNSKAGALQFCFRKPNLT 540
+ ++ D ILGP+ L + S E+ A + L+ L+FCF + NL+
Sbjct: 15 IEESTDGMILGPEDLSYQIYDVSGESNSAVSTEDLKECLKKQLEFCFSRENLS 67
>AP001745-3|BAA95529.1| 1066|Homo sapiens ZNF295 protein.
Length = 1066
Score = 30.3 bits (65), Expect = 5.0
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 259 YYSRLCNSAFRSSINLWDCFRSVLLQTIKISLREDS 366
+ +CN AFR++ LW F+S + Q + S ++S
Sbjct: 937 FICHVCNKAFRTNFRLWSHFQSHMSQASEESAHKES 972
>AK125113-1|BAC86052.1| 654|Homo sapiens protein ( Homo sapiens
cDNA FLJ43123 fis, clone CTONG3003972. ).
Length = 654
Score = 30.3 bits (65), Expect = 5.0
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 382 LSQNVDAAILGPDLLHAESTACSHENAVARLRQKLRNSKAGALQFCFRKPNLT 540
+ ++ D ILGP+ L + S E+ A + L+ L+FCF + NL+
Sbjct: 15 IEESTDGMILGPEDLSYQIYDVSGESNSAVSTEDLKECLKKQLEFCFSRENLS 67
>AB041015-1|BAD74064.1| 865|Homo sapiens zinc finger protein short
form protein.
Length = 865
Score = 30.3 bits (65), Expect = 5.0
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 259 YYSRLCNSAFRSSINLWDCFRSVLLQTIKISLREDS 366
+ +CN AFR++ LW F+S + Q + S ++S
Sbjct: 736 FICHVCNKAFRTNFRLWSHFQSHMSQASEESAHKES 771
>AB041014-1|BAD74063.1| 1066|Homo sapiens zinc finger protein long
form protein.
Length = 1066
Score = 30.3 bits (65), Expect = 5.0
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 259 YYSRLCNSAFRSSINLWDCFRSVLLQTIKISLREDS 366
+ +CN AFR++ LW F+S + Q + S ++S
Sbjct: 937 FICHVCNKAFRTNFRLWSHFQSHMSQASEESAHKES 972
>AB033053-1|BAA86541.1| 1069|Homo sapiens KIAA1227 protein protein.
Length = 1069
Score = 30.3 bits (65), Expect = 5.0
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 259 YYSRLCNSAFRSSINLWDCFRSVLLQTIKISLREDS 366
+ +CN AFR++ LW F+S + Q + S ++S
Sbjct: 940 FICHVCNKAFRTNFRLWSHFQSHMSQASEESAHKES 975
>BC063290-1|AAH63290.1| 1066|Homo sapiens zinc finger protein 295
protein.
Length = 1066
Score = 29.9 bits (64), Expect = 6.7
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 259 YYSRLCNSAFRSSINLWDCFRSVLLQTIKISLREDS 366
+ +CN AFR++ LW F+S + Q + S ++S
Sbjct: 937 FICHVCNKAFRTNFRLWSHFQSHMPQASEESAHKES 972
>AY603755-1|AAT80901.1| 3094|Homo sapiens striated muscle
preferentially expressed protein protein.
Length = 3094
Score = 29.9 bits (64), Expect = 6.7
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 384 LPKCRRSHPWSRPSSCRIYC 443
L K HPWSRPSSC C
Sbjct: 3066 LRKVLSVHPWSRPSSCLSVC 3085
>AB037718-1|BAA92535.1| 2242|Homo sapiens KIAA1297 protein protein.
Length = 2242
Score = 29.9 bits (64), Expect = 6.7
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 384 LPKCRRSHPWSRPSSCRIYC 443
L K HPWSRPSSC C
Sbjct: 2214 LRKVLSVHPWSRPSSCLSVC 2233
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,853,135
Number of Sequences: 237096
Number of extensions: 1331087
Number of successful extensions: 2689
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2688
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -