Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12c01r
(749 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79339-1|CAA55897.1| 606|Drosophila melanogaster musashi protein. 29 6.8
BT003274-1|AAO25031.1| 313|Drosophila melanogaster LD15419p pro... 29 6.8
AY119171-1|AAM51031.1| 634|Drosophila melanogaster RH49436p pro... 29 6.8
AY089625-1|AAL90363.1| 826|Drosophila melanogaster RE38137p pro... 29 6.8
AY051802-1|AAK93226.1| 606|Drosophila melanogaster LD31631p pro... 29 6.8
AE014297-3816|AAF56478.2| 606|Drosophila melanogaster CG5099-PA... 29 6.8
AE014297-3812|AAN14056.2| 634|Drosophila melanogaster CG5099-PB... 29 6.8
AE014297-779|AAF54263.1| 826|Drosophila melanogaster CG9770-PA ... 29 6.8
>X79339-1|CAA55897.1| 606|Drosophila melanogaster musashi protein.
Length = 606
Score = 29.1 bits (62), Expect = 6.8
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +1
Query: 205 LSAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQCG 369
++A + Q H+AV+ + + HSA A + ++A + HS A Q G
Sbjct: 500 VAAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 554
Score = 29.1 bits (62), Expect = 6.8
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 296 SAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQSG 457
+A + Q H+AV+ + + HSA A + ++A + HS A Q+G
Sbjct: 501 AAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 554
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 230 SAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQCG 391
+A + Q H+AV+ + + HSA A + ++A + HS A Q G
Sbjct: 501 AAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 554
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 252 SAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQCG 413
+A + Q H+AV+ + + HSA A + ++A + HS A Q G
Sbjct: 501 AAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 554
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +1
Query: 274 SAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQCG 435
+A + Q H+AV+ + + HSA A + ++A + HS A Q G
Sbjct: 501 AAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 554
>BT003274-1|AAO25031.1| 313|Drosophila melanogaster LD15419p
protein.
Length = 313
Score = 29.1 bits (62), Expect = 6.8
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +1
Query: 205 LSAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQCG 369
++A + Q H+AV+ + + HSA A + ++A + HS A Q G
Sbjct: 207 VAAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 261
Score = 29.1 bits (62), Expect = 6.8
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 296 SAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQSG 457
+A + Q H+AV+ + + HSA A + ++A + HS A Q+G
Sbjct: 208 AAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 261
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 230 SAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQCG 391
+A + Q H+AV+ + + HSA A + ++A + HS A Q G
Sbjct: 208 AAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 261
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 252 SAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQCG 413
+A + Q H+AV+ + + HSA A + ++A + HS A Q G
Sbjct: 208 AAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 261
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +1
Query: 274 SAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQCG 435
+A + Q H+AV+ + + HSA A + ++A + HS A Q G
Sbjct: 208 AAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 261
>AY119171-1|AAM51031.1| 634|Drosophila melanogaster RH49436p
protein.
Length = 634
Score = 29.1 bits (62), Expect = 6.8
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +1
Query: 205 LSAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQCG 369
++A + Q H+AV+ + + HSA A + ++A + HS A Q G
Sbjct: 528 VAAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 582
Score = 29.1 bits (62), Expect = 6.8
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 296 SAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQSG 457
+A + Q H+AV+ + + HSA A + ++A + HS A Q+G
Sbjct: 529 AAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 582
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 230 SAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQCG 391
+A + Q H+AV+ + + HSA A + ++A + HS A Q G
Sbjct: 529 AAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 582
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 252 SAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQCG 413
+A + Q H+AV+ + + HSA A + ++A + HS A Q G
Sbjct: 529 AAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 582
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +1
Query: 274 SAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQCG 435
+A + Q H+AV+ + + HSA A + ++A + HS A Q G
Sbjct: 529 AAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 582
>AY089625-1|AAL90363.1| 826|Drosophila melanogaster RE38137p
protein.
Length = 826
Score = 29.1 bits (62), Expect = 6.8
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +2
Query: 374 ARSQCGHSAVTVRSQRGHSAVTARSQSGG 460
A +QC SA+ S G SA T RS SGG
Sbjct: 414 AITQCTGSALDTHSSGGSSATTERSLSGG 442
>AY051802-1|AAK93226.1| 606|Drosophila melanogaster LD31631p
protein.
Length = 606
Score = 29.1 bits (62), Expect = 6.8
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +1
Query: 205 LSAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQCG 369
++A + Q H+AV+ + + HSA A + ++A + HS A Q G
Sbjct: 500 VAAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 554
Score = 29.1 bits (62), Expect = 6.8
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 296 SAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQSG 457
+A + Q H+AV+ + + HSA A + ++A + HS A Q+G
Sbjct: 501 AAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 554
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 230 SAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQCG 391
+A + Q H+AV+ + + HSA A + ++A + HS A Q G
Sbjct: 501 AAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 554
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 252 SAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQCG 413
+A + Q H+AV+ + + HSA A + ++A + HS A Q G
Sbjct: 501 AAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 554
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +1
Query: 274 SAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQCG 435
+A + Q H+AV+ + + HSA A + ++A + HS A Q G
Sbjct: 501 AAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 554
>AE014297-3816|AAF56478.2| 606|Drosophila melanogaster CG5099-PA,
isoform A protein.
Length = 606
Score = 29.1 bits (62), Expect = 6.8
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +1
Query: 205 LSAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQCG 369
++A + Q H+AV+ + + HSA A + ++A + HS A Q G
Sbjct: 500 VAAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 554
Score = 29.1 bits (62), Expect = 6.8
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 296 SAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQSG 457
+A + Q H+AV+ + + HSA A + ++A + HS A Q+G
Sbjct: 501 AAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 554
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 230 SAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQCG 391
+A + Q H+AV+ + + HSA A + ++A + HS A Q G
Sbjct: 501 AAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 554
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 252 SAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQCG 413
+A + Q H+AV+ + + HSA A + ++A + HS A Q G
Sbjct: 501 AAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 554
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +1
Query: 274 SAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQCG 435
+A + Q H+AV+ + + HSA A + ++A + HS A Q G
Sbjct: 501 AAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 554
>AE014297-3812|AAN14056.2| 634|Drosophila melanogaster CG5099-PB,
isoform B protein.
Length = 634
Score = 29.1 bits (62), Expect = 6.8
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +1
Query: 205 LSAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQCG 369
++A + Q H+AV+ + + HSA A + ++A + HS A Q G
Sbjct: 528 VAAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 582
Score = 29.1 bits (62), Expect = 6.8
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 296 SAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQSG 457
+A + Q H+AV+ + + HSA A + ++A + HS A Q+G
Sbjct: 529 AAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 582
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 230 SAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQCG 391
+A + Q H+AV+ + + HSA A + ++A + HS A Q G
Sbjct: 529 AAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 582
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 252 SAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQCG 413
+A + Q H+AV+ + + HSA A + ++A + HS A Q G
Sbjct: 529 AAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 582
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +1
Query: 274 SAVTARSQCGHSAVTVRSQRGHSAVTARSQCGHSAVTVRSQRGHSAVTARSQCG 435
+A + Q H+AV+ + + HSA A + ++A + HS A Q G
Sbjct: 529 AAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAG 582
>AE014297-779|AAF54263.1| 826|Drosophila melanogaster CG9770-PA
protein.
Length = 826
Score = 29.1 bits (62), Expect = 6.8
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +2
Query: 374 ARSQCGHSAVTVRSQRGHSAVTARSQSGG 460
A +QC SA+ S G SA T RS SGG
Sbjct: 414 AITQCTGSALDTHSSGGSSATTERSLSGG 442
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,424,720
Number of Sequences: 53049
Number of extensions: 469626
Number of successful extensions: 2091
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1781
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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