Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12c01f
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY752905-1|AAV30079.1|  100|Anopheles gambiae peroxidase 11 prot...    27   0.35 
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   1.9  
AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         25   1.9  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    23   5.7  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   5.7  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   7.5  
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    23   9.9  

>AY752905-1|AAV30079.1|  100|Anopheles gambiae peroxidase 11
           protein.
          Length = 100

 Score = 27.5 bits (58), Expect = 0.35
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 211 LPSLIVQKQRQTHLKPYSGTQMWPGVGALT 122
           L SL +Q+ R   L+PY+  + W G+  LT
Sbjct: 45  LASLNIQRGRDHALRPYNDYRSWAGLERLT 74


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 361 CPLWALCPRSTRQ 323
           CPLW LC  ++RQ
Sbjct: 555 CPLWPLCGSASRQ 567


>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 84  HHHFLQYCYGSFHLVVRF 31
           H ++  YC GS HL  RF
Sbjct: 202 HGYYANYCKGSCHLADRF 219


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 448 PAHMRLFSVRASIGLHSRDASGTTKRQ 528
           P H+  +  R  IG  + +A+G TKRQ
Sbjct: 257 PPHIYPWMKRVHIGQSTVNANGETKRQ 283


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 359 STVGALPSEHSPADW 315
           S V  + S+HSPA+W
Sbjct: 386 SVVSTMFSDHSPAEW 400


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 474 ARQHRPALARRQRHHQATGA 533
           ARQH P + ++ RH   + A
Sbjct: 271 ARQHSPKIVKKTRHLSTSSA 290


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 507 QRHHQATGATKSRSRPLL 560
           QRH   T  TK+ S PLL
Sbjct: 32  QRHVYGTSKTKNASAPLL 49


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,385
Number of Sequences: 2352
Number of extensions: 10838
Number of successful extensions: 31
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)