Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12c01f
(598 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 42 6e-06
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 27 0.14
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 27 0.14
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 25 0.43
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 25 0.43
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 25 0.56
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 23 3.0
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 23 3.0
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 22 5.3
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 22 5.3
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 22 5.3
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 6.9
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 21 6.9
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 6.9
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 21 6.9
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 21 6.9
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 21 9.2
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 21 9.2
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 41.5 bits (93), Expect = 6e-06
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 18/200 (9%)
Frame = +1
Query: 37 NNKMKTPITVLQEMMMKLGQIPEYECVAQSGPQHQATFEFRCKALGESVSASARSKREAK 216
N + K + L E+ K G + Y+ V Q+GP H F + G++ R+K+ AK
Sbjct: 31 NPQPKNAVCALNEL--KSGAV--YKVVDQTGPTHAPIFTIAVQIDGQTYEGKGRTKKMAK 86
Query: 217 QEAARAML-------------LCLSTIGHRVP--PPFATEFTQPSHSNQSAGECSEGKAP 351
AA L ++T +P P F ++ T+ + +A + +
Sbjct: 87 HAAAELALRNIVQFRNTPEVHQAINTCQPSIPLEPDFTSDVTERDNHLVNAFKTLTQEPK 146
Query: 352 TVD---SRSYVALLKELCEEYKLPGVEYALVADTGPAHMRLFSVRASIGLHSRDASGTTK 522
+ + VAL+ EL PGV Y V+D G ++ + F++ +I + + +G +K
Sbjct: 147 NTNKFLEKGPVALINEL-----YPGVVYKCVSDNGESYAK-FTISVTIDGETFEGTGPSK 200
Query: 523 RQARQKAAADLYLFLRETLS 582
+ A+ A+ LR S
Sbjct: 201 KLAKAAASKAALAKLRNVHS 220
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 27.1 bits (57), Expect = 0.14
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2
Query: 507 GVARVQADAGAHAEQAHVRGPS 442
G A AG H AH+RGPS
Sbjct: 10 GAAAAVTSAGGHGFDAHLRGPS 31
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 27.1 bits (57), Expect = 0.14
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2
Query: 507 GVARVQADAGAHAEQAHVRGPS 442
G A AG H AH+RGPS
Sbjct: 10 GAAAAVTSAGGHGFDAHLRGPS 31
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 25.4 bits (53), Expect = 0.43
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -1
Query: 235 WHGLLPA-LLPSLIVQKQRQTHLKPYSGTQMW 143
WHG+L A +LP+ Q +R + + G +MW
Sbjct: 86 WHGVLNATVLPNSCYQ-ERYEYFPGFPGEEMW 116
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 25.4 bits (53), Expect = 0.43
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -1
Query: 235 WHGLLPA-LLPSLIVQKQRQTHLKPYSGTQMW 143
WHG+L A +LP+ Q +R + + G +MW
Sbjct: 86 WHGVLNATVLPNSCYQ-ERYEYFPGFPGEEMW 116
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 25.0 bits (52), Expect = 0.56
Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -2
Query: 363 TVHCGRFALGA-LASRLVTMRGLCKFSSKWWGYTVTYC 253
+V C F G L T +C++ WW Y + C
Sbjct: 136 SVECIVFNSGTILCVPFTTYTPVCEYDHTWWPYDILNC 173
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 22.6 bits (46), Expect = 3.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 489 PALARRQRHHQATGATKSRS 548
P LAR+Q TG +SRS
Sbjct: 342 PKLARKQFQKNTTGLERSRS 361
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 22.6 bits (46), Expect = 3.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 273 GYTVTYCRKTQQHGTGC 223
G+T+T KT+ TGC
Sbjct: 813 GFTMTKSGKTRHQNTGC 829
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 468 QRARQHRPALARRQRHHQATGATKSRS 548
+RARQ R + RH +A A +S S
Sbjct: 229 ERARQSRINAVQSTRHREADDAEESVS 255
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 468 QRARQHRPALARRQRHHQATGATKSRS 548
+RARQ R + RH +A A +S S
Sbjct: 229 ERARQSRINAVQSTRHREADDAEESVS 255
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 468 QRARQHRPALARRQRHHQATGATKSRS 548
+RARQ R + RH +A A +S S
Sbjct: 229 ERARQSRINAVQSTRHREADDAEESVS 255
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.4 bits (43), Expect = 6.9
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 492 ALARRQRHHQATGATKSRSRPLLVP 566
ALAR +RH + S RP + P
Sbjct: 235 ALARLERHLERKAWVASFGRPKMTP 259
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 21.4 bits (43), Expect = 6.9
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +1
Query: 193 ARSKREAKQEAARAMLLCLSTIGHRVPP 276
A ++ +Q R LC+ TIG ++ P
Sbjct: 256 AEEYKKIQQILIRMNKLCIQTIGGQIKP 283
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.4 bits (43), Expect = 6.9
Identities = 9/39 (23%), Positives = 17/39 (43%)
Frame = -1
Query: 175 HLKPYSGTQMWPGVGALTEQHIHTLESVQVSSSFLAVLL 59
H + Q W + +L E H+H + +++ LL
Sbjct: 78 HFESSFNAQSWQRLTSLHELHVHGCKVLRIPEGAFQPLL 116
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.9
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Frame = +1
Query: 271 PPPFATEFTQPSHSNQSAGECSEGKAPTVDSR-SYVAL----LKELCE 399
PP A +FT G+ S G P +D +++A +KE C+
Sbjct: 333 PPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFADIKEKCD 380
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -1
Query: 88 VSSSFLAVLLWEFSSC 41
V S VLLW+F C
Sbjct: 106 VHESLKNVLLWDFQEC 121
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.2
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Frame = +1
Query: 271 PPPFATEFTQPSHSNQSAGECSEGKAPTVDSR-SYVAL----LKELCE 399
PP A +FT G+ S G P +D +++A +KE C+
Sbjct: 333 PPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCD 380
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 21.0 bits (42), Expect = 9.2
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Frame = +1
Query: 271 PPPFATEFTQPSHSNQSAGECSEGKAPTVDSR-SYVAL----LKELCE 399
PP A +FT G+ S G P +D +++A +KE C+
Sbjct: 44 PPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCD 91
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,225
Number of Sequences: 438
Number of extensions: 2564
Number of successful extensions: 19
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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