Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12b22r
         (728 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118559-1|AAM49928.1|  280|Drosophila melanogaster LD37702p pro...    66   6e-11
AE014296-1928|AAN11883.1|  721|Drosophila melanogaster CG6199-PB...    66   6e-11
AE014296-1927|AAF50079.1|  721|Drosophila melanogaster CG6199-PA...    66   6e-11

>AY118559-1|AAM49928.1|  280|Drosophila melanogaster LD37702p
           protein.
          Length = 280

 Score = 65.7 bits (153), Expect = 6e-11
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = -3

Query: 726 MHPGRLTHYHEGLLVTKGTRYIMISFVDP 640
           MHPGRLTHYHEGLLVT GTRYIMISF+DP
Sbjct: 252 MHPGRLTHYHEGLLVTNGTRYIMISFIDP 280


>AE014296-1928|AAN11883.1|  721|Drosophila melanogaster CG6199-PB,
           isoform B protein.
          Length = 721

 Score = 65.7 bits (153), Expect = 6e-11
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = -3

Query: 726 MHPGRLTHYHEGLLVTKGTRYIMISFVDP 640
           MHPGRLTHYHEGLLVT GTRYIMISF+DP
Sbjct: 693 MHPGRLTHYHEGLLVTNGTRYIMISFIDP 721


>AE014296-1927|AAF50079.1|  721|Drosophila melanogaster CG6199-PA,
           isoform A protein.
          Length = 721

 Score = 65.7 bits (153), Expect = 6e-11
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = -3

Query: 726 MHPGRLTHYHEGLLVTKGTRYIMISFVDP 640
           MHPGRLTHYHEGLLVT GTRYIMISF+DP
Sbjct: 693 MHPGRLTHYHEGLLVTNGTRYIMISFIDP 721


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,467,131
Number of Sequences: 53049
Number of extensions: 476418
Number of successful extensions: 1093
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1093
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)