Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12b22f
(648 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q20679 Cluster: Procollagen-lysine,2-oxoglutarate 5-dio... 180 4e-44
UniRef50_Q9VTH0 Cluster: CG6199-PA, isoform A; n=9; Coelomata|Re... 178 1e-43
UniRef50_O60568 Cluster: Procollagen-lysine,2-oxoglutarate 5-dio... 173 2e-42
UniRef50_O00469 Cluster: Procollagen-lysine,2-oxoglutarate 5-dio... 173 4e-42
UniRef50_A7S477 Cluster: Predicted protein; n=1; Nematostella ve... 171 9e-42
UniRef50_Q5BSI0 Cluster: SJCHGC04226 protein; n=1; Schistosoma j... 168 9e-41
UniRef50_Q5UNV6 Cluster: Uncharacterized protein R699; n=1; Acan... 134 2e-30
UniRef50_UPI0000E4A230 Cluster: PREDICTED: similar to Plod-prov ... 132 7e-30
UniRef50_Q4TBD7 Cluster: Chromosome undetermined SCAF7145, whole... 128 9e-29
UniRef50_Q1VL57 Cluster: Putative uncharacterized protein; n=1; ... 74 3e-12
UniRef50_UPI0000DBFF6E Cluster: procollagen-lysine, 2-oxoglutara... 57 4e-07
UniRef50_Q4XZK3 Cluster: Putative uncharacterized protein; n=4; ... 46 0.001
UniRef50_A5K720 Cluster: Putative uncharacterized protein; n=2; ... 38 0.28
UniRef50_A6FDM1 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_A4TW09 Cluster: Lytic transglycosylase, catalytic; n=4;... 35 1.5
UniRef50_Q98R85 Cluster: Putative uncharacterized protein MYPU_1... 33 6.0
UniRef50_Q5P2T1 Cluster: Glycosyl transferase; n=1; Azoarcus sp.... 33 6.0
UniRef50_A3HU06 Cluster: UspA; n=1; Algoriphagus sp. PR1|Rep: Us... 33 6.0
>UniRef50_Q20679 Cluster: Procollagen-lysine,2-oxoglutarate
5-dioxygenase precursor; n=2; Caenorhabditis|Rep:
Procollagen-lysine,2-oxoglutarate 5-dioxygenase
precursor - Caenorhabditis elegans
Length = 730
Score = 180 bits (437), Expect = 4e-44
Identities = 88/179 (49%), Positives = 126/179 (70%), Gaps = 4/179 (2%)
Frame = +3
Query: 123 TQATD--EVVVLTVATDDNHGLERFLRSAKVYNIDVEVLGKGEEWSGGDMNFP-GGGQKV 293
T TD E+VV+TVAT++ GL+R L SAK ++I++EVLG GE+W+GGD GGGQK+
Sbjct: 17 TTITDLPELVVVTVATENTDGLKRLLESAKAFDINIEVLGLGEKWNGGDTRIEQGGGQKI 76
Query: 294 ILLKNRLEKLMKADNKEKIILFTDSYDVMFLGNLDEIVKKF-KSFPDTRVLFSAEQFCWP 470
+L + +EK D + +I+F D+YDV+F + I++KF + + + R+LF AE FCWP
Sbjct: 77 RILSDWIEKYK--DASDTMIMFVDAYDVVFNADSTTILRKFFEHYSEKRLLFGAEPFCWP 134
Query: 471 DAKLATQYPNIEVVSPYLNSGGFIGYLPEIYEIINSNPIKDKDDDQLYYTXIYLDKDLR 647
D LA +YP +E +LNSG F+GY PE+++I+ ++DKDDDQLYYT IYLD+ LR
Sbjct: 135 DQSLAPEYPIVEFGKRFLNSGLFMGYGPEMHKILKLKSVEDKDDDQLYYTMIYLDEKLR 193
>UniRef50_Q9VTH0 Cluster: CG6199-PA, isoform A; n=9; Coelomata|Rep:
CG6199-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 721
Score = 178 bits (433), Expect = 1e-43
Identities = 89/189 (47%), Positives = 123/189 (65%), Gaps = 1/189 (0%)
Frame = +3
Query: 84 LILCVFVILFNSHTQATDEVVVLTVATDDNHGLERFLRSAKVYNIDVEVLGKGEEWSGGD 263
L+L ++ + D++ V TVAT+ G R++RSA+VY+I+V LG GEEW GGD
Sbjct: 10 LLLLAVTSQGDAESNWNDKIKVFTVATEPTDGYTRYIRSARVYDIEVTTLGLGEEWKGGD 69
Query: 264 MNFPGGGQKVILLKNRLEKLMKADNKEKIILFTDSYDVMFLGNLDEIVKKFKSFPDTRVL 443
M PGGG K+ LL+ + + E IILFTDSYDV+ LDEI +KFK ++L
Sbjct: 70 MQKPGGGFKLNLLREAIAPY--KNEPETIILFTDSYDVIITTTLDEIFEKFKE-SGAKIL 126
Query: 444 FSAEQFCWPDAKLATQYPNIE-VVSPYLNSGGFIGYLPEIYEIINSNPIKDKDDDQLYYT 620
FSAE++CWPD LA YP +E S +LNSG FIGY P+++ ++ +PI+D DDQLY+T
Sbjct: 127 FSAEKYCWPDKSLANDYPEVEGKASRFLNSGAFIGYAPQVFALL-VDPIEDTADDQLYFT 185
Query: 621 XIYLDKDLR 647
I+LD+ R
Sbjct: 186 KIFLDETKR 194
>UniRef50_O60568 Cluster: Procollagen-lysine,2-oxoglutarate
5-dioxygenase 3 precursor; n=75; Euteleostomi|Rep:
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3
precursor - Homo sapiens (Human)
Length = 738
Score = 173 bits (422), Expect = 2e-42
Identities = 87/172 (50%), Positives = 115/172 (66%), Gaps = 1/172 (0%)
Frame = +3
Query: 135 DEVVVLTVATDDNHGLERFLRSAKVYNIDVEVLGKGEEWSGGDM-NFPGGGQKVILLKNR 311
++++V+TVAT + G RFLRSA+ +N V LG GEEW GGD+ GGGQKV LK
Sbjct: 37 EKLLVITVATAETEGYLRFLRSAEFFNYTVRTLGLGEEWRGGDVARTVGGGQKVRWLKKE 96
Query: 312 LEKLMKADNKEKIILFTDSYDVMFLGNLDEIVKKFKSFPDTRVLFSAEQFCWPDAKLATQ 491
+EK AD ++ II+F DSYDV+ G+ E++KKF +R+LFSAE FCWP+ LA Q
Sbjct: 97 MEKY--ADREDMIIMFVDSYDVILAGSPTELLKKFVQ-SGSRLLFSAESFCWPEWGLAEQ 153
Query: 492 YPNIEVVSPYLNSGGFIGYLPEIYEIINSNPIKDKDDDQLYYTXIYLDKDLR 647
YP + +LNSGGFIG+ I++I+ KD DDDQL+YT +YLD LR
Sbjct: 154 YPEVGTGKRFLNSGGFIGFATTIHQIVRQWKYKDDDDDQLFYTRLYLDPGLR 205
>UniRef50_O00469 Cluster: Procollagen-lysine,2-oxoglutarate
5-dioxygenase 2 precursor; n=47; Deuterostomia|Rep:
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2
precursor - Homo sapiens (Human)
Length = 737
Score = 173 bits (420), Expect = 4e-42
Identities = 79/169 (46%), Positives = 120/169 (71%), Gaps = 1/169 (0%)
Frame = +3
Query: 132 TDEVVVLTVATDDNHGLERFLRSAKVYNIDVEVLGKGEEWSGGD-MNFPGGGQKVILLKN 308
TD+++V+TVAT ++ G RF++SAK +N V+VLG+GEEW GGD +N GGGQKV L+K
Sbjct: 36 TDKLLVITVATKESDGFHRFMQSAKYFNYTVKVLGQGEEWRGGDGINSIGGGQKVRLMKE 95
Query: 309 RLEKLMKADNKEKIILFTDSYDVMFLGNLDEIVKKFKSFPDTRVLFSAEQFCWPDAKLAT 488
+E AD + +++FT+ +DV+F G +E++KKF+ + +V+F+A+ WPD +LA
Sbjct: 96 VMEHY--ADQDDLVVMFTECFDVIFAGGPEEVLKKFQK-ANHKVVFAADGILWPDKRLAD 152
Query: 489 QYPNIEVVSPYLNSGGFIGYLPEIYEIINSNPIKDKDDDQLYYTXIYLD 635
+YP + + YLNSGGFIGY P + I+ ++D DDDQL+YT +Y+D
Sbjct: 153 KYPVVHIGKRYLNSGGFIGYAPYVNRIVQQWNLQDNDDDQLFYTKVYID 201
>UniRef50_A7S477 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 729
Score = 171 bits (417), Expect = 9e-42
Identities = 81/171 (47%), Positives = 111/171 (64%), Gaps = 1/171 (0%)
Frame = +3
Query: 138 EVVVLTVATDDNHGLERFLRSAKVYNIDVEVLGKGEEWSGGDMNF-PGGGQKVILLKNRL 314
E++VLTVAT++ G RF+RS Y++ V V+G W GG++ PGG K+ LLK+ +
Sbjct: 35 ELLVLTVATEETDGYTRFMRSCSHYDVPVRVIGMNTSWKGGNVRTDPGGAHKINLLKDAV 94
Query: 315 EKLMKADNKEKIILFTDSYDVMFLGNLDEIVKKFKSFPDTRVLFSAEQFCWPDAKLATQY 494
+ D K +++F+DSYD +FL + +KKF F V+FSAE FCWPD L +Y
Sbjct: 95 AEYK--DKKNLVLMFSDSYDAIFLARAEAFIKKFLEFK-AHVVFSAEGFCWPDRWLVDKY 151
Query: 495 PNIEVVSPYLNSGGFIGYLPEIYEIINSNPIKDKDDDQLYYTXIYLDKDLR 647
P + YL SGGFIGY P ++IIN P+KD+DDDQL+YT IYLDK+ R
Sbjct: 152 PEVGHGKRYLCSGGFIGYAPVFHQIINEKPVKDEDDDQLFYTNIYLDKEKR 202
>UniRef50_Q5BSI0 Cluster: SJCHGC04226 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04226 protein - Schistosoma
japonicum (Blood fluke)
Length = 179
Score = 168 bits (409), Expect = 9e-41
Identities = 81/172 (47%), Positives = 118/172 (68%), Gaps = 2/172 (1%)
Frame = +3
Query: 138 EVVVLTVATDDNHGLERFLRSAKVYNIDVEVLGKGEEWSGGDM-NFPGGGQKVILLKNRL 314
+++VLTVAT+ N L+RFLRS + +V+VLG+G W GG++ GGGQKV +LK+ L
Sbjct: 6 DILVLTVATEKNDALDRFLRSCSLNGFEVKVLGEGSYWKGGNVAKSTGGGQKVNILKDEL 65
Query: 315 EKLMKADNKEKIILFTDSYDVMFLGNLDEIVKKFKSFPDTRVLFSAEQFCWPDAKLATQY 494
K ++++LF DSYDV+F+ N+ ++K ++ F +++V+FSAE+FCWP L + Y
Sbjct: 66 AK--STYRPDQLVLFVDSYDVVFMQNVANLLKGYERF-ESKVIFSAEEFCWPQPSLKSLY 122
Query: 495 PNIEVVSP-YLNSGGFIGYLPEIYEIINSNPIKDKDDDQLYYTXIYLDKDLR 647
P ++ YLNSGGFIG + + +I+N PI D DDDQLYYT I+LD LR
Sbjct: 123 PEVKPGERRYLNSGGFIGPVANLIKIVNHTPINDDDDDQLYYTNIFLDSKLR 174
>UniRef50_Q5UNV6 Cluster: Uncharacterized protein R699; n=1;
Acanthamoeba polyphaga mimivirus|Rep: Uncharacterized
protein R699 - Mimivirus
Length = 455
Score = 134 bits (324), Expect = 2e-30
Identities = 64/169 (37%), Positives = 111/169 (65%), Gaps = 2/169 (1%)
Frame = +3
Query: 141 VVVLTVATDDNHGLERFLRSAKVYNIDVEVLGKGEEWSGGDMNFP-GGGQKVILLKNRLE 317
V+ + ++ G+ RF + + +N+ ++G+G++W+GG++ GGGQK+ L LE
Sbjct: 12 VLGIGISVHKTDGVLRFEKYCQAHNLQYMIVGEGKKWNGGNLESEAGGGQKINELLIALE 71
Query: 318 KLMKADNKEKIILFTDSYDVMFLGNLDEIVKKFKSF-PDTRVLFSAEQFCWPDAKLATQY 494
+ DNK +I+ D+YD++ L +EI++K++ PD +V+FS+E +CWPDA L +Y
Sbjct: 72 SIK--DNK--LIVVCDTYDLIPLSGPEEILRKYRFLTPDNKVVFSSELYCWPDASLVERY 127
Query: 495 PNIEVVSPYLNSGGFIGYLPEIYEIINSNPIKDKDDDQLYYTXIYLDKD 641
P ++ YLNSG F+GY +IYE+I N +KD+DDDQL+++ +++ D
Sbjct: 128 PKVDTKYKYLNSGAFMGYRDDIYEMI-KNGVKDRDDDQLFFSIKFIETD 175
>UniRef50_UPI0000E4A230 Cluster: PREDICTED: similar to Plod-prov
protein, partial; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to Plod-prov protein,
partial - Strongylocentrotus purpuratus
Length = 609
Score = 132 bits (319), Expect = 7e-30
Identities = 62/136 (45%), Positives = 95/136 (69%), Gaps = 1/136 (0%)
Frame = +3
Query: 243 EEWSGGDMNF-PGGGQKVILLKNRLEKLMKADNKEKIILFTDSYDVMFLGNLDEIVKKFK 419
+EW GGD+ PGGG K+ LL+ L + D+++ +I+FTDSYDV+FL + DE+++KFK
Sbjct: 3 QEWKGGDIERGPGGGFKINLLREALTQYK--DDEDLVIMFTDSYDVLFLADADEMLRKFK 60
Query: 420 SFPDTRVLFSAEQFCWPDAKLATQYPNIEVVSPYLNSGGFIGYLPEIYEIINSNPIKDKD 599
++ +LFSAE + WP+ LA +YP +E PYL SG ++GY P IY+ ++ PI+D
Sbjct: 61 AY-QINLLFSAETYIWPEKSLANKYPKVENGYPYLCSGLYMGYAPYIYKALSYKPIEDIA 119
Query: 600 DDQLYYTXIYLDKDLR 647
DDQL++T +YL + +R
Sbjct: 120 DDQLFFTELYLAERVR 135
>UniRef50_Q4TBD7 Cluster: Chromosome undetermined SCAF7145, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF7145, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 607
Score = 128 bits (310), Expect = 9e-29
Identities = 63/135 (46%), Positives = 89/135 (65%), Gaps = 1/135 (0%)
Frame = +3
Query: 135 DEVVVLTVATDDNHGLERFLRSAKVYNIDVEVLGKGEEWSGGDM-NFPGGGQKVILLKNR 311
+ ++V+T AT++ G RF+R+A+ +N V+VLG GEEW GGD+ GGGQKV LK
Sbjct: 1 ENLLVITAATEETDGFHRFMRTAREFNYTVKVLGLGEEWRGGDVARTVGGGQKVRWLK-- 58
Query: 312 LEKLMKADNKEKIILFTDSYDVMFLGNLDEIVKKFKSFPDTRVLFSAEQFCWPDAKLATQ 491
E+L K +++ ++LF DSYDV+ +E++ KF RV+FSAE FCWPD +LA +
Sbjct: 59 -EELRKHSDQDTVVLFVDSYDVILASGPEELLSKFSRLAH-RVVFSAEGFCWPDQRLAPK 116
Query: 492 YPNIEVVSPYLNSGG 536
YP + YLNSGG
Sbjct: 117 YPEVPSGKRYLNSGG 131
>UniRef50_Q1VL57 Cluster: Putative uncharacterized protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: Putative
uncharacterized protein - Psychroflexus torquis ATCC
700755
Length = 364
Score = 73.7 bits (173), Expect = 3e-12
Identities = 41/117 (35%), Positives = 67/117 (57%), Gaps = 4/117 (3%)
Frame = +3
Query: 276 GGGQKVILLKNRLEKLMKADNKEKIILFTDSYDVMFLGNLDEIVKKFKSFPDTRVLFSAE 455
GGGQK+ L+K ++ +D +++F D YDV +++EI +F F + R +FS+E
Sbjct: 6 GGGQKINLVKEFIKDKKDSD----VLVFLDGYDVFLSESIEEITYRFMEFSE-RAIFSSE 60
Query: 456 QFCWPDAKLATQYPN----IEVVSPYLNSGGFIGYLPEIYEIINSNPIKDKDDDQLY 614
+FCWPD L+ + N + YLNSG ++ + E+ +I + I + DDQLY
Sbjct: 61 RFCWPDEGLSQELINKNNTQDTPYQYLNSGTYVARIGELKKIFEDH-IPNNGDDQLY 116
>UniRef50_UPI0000DBFF6E Cluster: procollagen-lysine, 2-oxoglutarate
5-dioxygenase 1; n=1; Rattus norvegicus|Rep:
procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 -
Rattus norvegicus
Length = 215
Score = 56.8 bits (131), Expect = 4e-07
Identities = 44/161 (27%), Positives = 66/161 (40%)
Frame = +3
Query: 135 DEVVVLTVATDDNHGLERFLRSAKVYNIDVEVLGKGEEWSGGDMNFPGGGQKVILLKNRL 314
D ++VLTVAT + G RF RSA+ +N ++ G W + G + L +
Sbjct: 26 DNLLVLTVATKETEGFRRFKRSAQFFNYKIQRCGLVPGWQCAPASLGGPRHQRALFSH-- 83
Query: 315 EKLMKADNKEKIILFTDSYDVMFLGNLDEIVKKFKSFPDTRVLFSAEQFCWPDAKLATQY 494
L K + L DSY F + + + +S A L
Sbjct: 84 --LQKQALSIVVTLTVDSYTTTFSTSANHDILALILTMAIGFHWSWNAHPVALAGLHPTS 141
Query: 495 PNIEVVSPYLNSGGFIGYLPEIYEIINSNPIKDKDDDQLYY 617
P E S + GGFIGY P + +++ +D D DQL+Y
Sbjct: 142 PQSEEKSKAVGGGGFIGYAPSLSKLVAEWEGQDNDSDQLFY 182
>UniRef50_Q4XZK3 Cluster: Putative uncharacterized protein; n=4;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 480
Score = 45.6 bits (103), Expect = 0.001
Identities = 32/90 (35%), Positives = 48/90 (53%)
Frame = +3
Query: 147 VLTVATDDNHGLERFLRSAKVYNIDVEVLGKGEEWSGGDMNFPGGGQKVILLKNRLEKLM 326
VLT AT + + S K NID+ VLG G +W G K+I +K E L
Sbjct: 12 VLTFATHEQGYFKTLQESCKELNIDLVVLGMGNKWEGFI-------SKLISVK---EYLK 61
Query: 327 KADNKEKIILFTDSYDVMFLGNLDEIVKKF 416
K D+K+ IILF D +D +F+ + I++++
Sbjct: 62 KCDDKD-IILFVDGFDTIFVQPPNVIIERY 90
>UniRef50_A5K720 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 615
Score = 37.5 bits (83), Expect = 0.28
Identities = 24/90 (26%), Positives = 44/90 (48%)
Frame = +3
Query: 147 VLTVATDDNHGLERFLRSAKVYNIDVEVLGKGEEWSGGDMNFPGGGQKVILLKNRLEKLM 326
VLT AT + + S NI++ VLG G++W G I ++++ +
Sbjct: 58 VLTFATHEQGYFKTLQESCSRLNIELTVLGMGKKWEG-----------FITKLVKVKEYI 106
Query: 327 KADNKEKIILFTDSYDVMFLGNLDEIVKKF 416
K+ + I+LF D +D F+ + IV+++
Sbjct: 107 KSCDDHDIVLFVDGFDTFFVQPANVIVERY 136
>UniRef50_A6FDM1 Cluster: Putative uncharacterized protein; n=1;
Moritella sp. PE36|Rep: Putative uncharacterized protein
- Moritella sp. PE36
Length = 789
Score = 35.5 bits (78), Expect = 1.1
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Frame = +3
Query: 273 PGGGQKVILLKNRLEKLMKADN--KEKI-ILFTDSYDVMFLGNLDEIVKKFKSFPDTRVL 443
P G K+ILLK RL+ + K KE + + T S DV + +D+I K + + T
Sbjct: 408 PDLGTKIILLKKRLDVIAKRQREIKESLAAIDTFSNDVKYQVVVDDIAKFYNTIQHTVPT 467
Query: 444 FSAEQFCWPDAKLATQYPNIEVVSPYLNSGGFIGYLPEI 560
A W + + + V+S GG YL E+
Sbjct: 468 VEASNLVWDEFLIDARADFSSVIS--AGVGGATHYLAEL 504
>UniRef50_A4TW09 Cluster: Lytic transglycosylase, catalytic; n=4;
Magnetospirillum|Rep: Lytic transglycosylase, catalytic
- Magnetospirillum gryphiswaldense
Length = 645
Score = 35.1 bits (77), Expect = 1.5
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = +3
Query: 222 VEVLGKGEEWSGGDMNFPGGGQKVILLKNRLEKLMKADNKEKIILFTDSYDVMFLGNLD 398
++ +G W G N GG KV LK + +L++ DN + + L LD
Sbjct: 202 IDTSDEGANWEGASYNSDGGSPKVKALKTKFRQLLRQDNGSAALALLTGSEAANLSALD 260
>UniRef50_Q98R85 Cluster: Putative uncharacterized protein
MYPU_1250; n=1; Mycoplasma pulmonis|Rep: Putative
uncharacterized protein MYPU_1250 - Mycoplasma pulmonis
Length = 547
Score = 33.1 bits (72), Expect = 6.0
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 303 KNRLEKLMKADNKEKIILFTDSYDVMFLGNLDEIVKKFK 419
K R+ L+ +N +K L T V+F G D+++KKFK
Sbjct: 274 KMRIPNLVHQENIDKYYLRTQKPSVLFKGAFDKLIKKFK 312
>UniRef50_Q5P2T1 Cluster: Glycosyl transferase; n=1; Azoarcus sp.
EbN1|Rep: Glycosyl transferase - Azoarcus sp. (strain
EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 306
Score = 33.1 bits (72), Expect = 6.0
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +3
Query: 345 KIILFTDSYDVMFLGNLDEIVKKFKSFPDTRVLFSAEQFCWPDAKLATQYP 497
+ ++F D+ D + G L + + + PDTR++ WPD K P
Sbjct: 89 RFLIFLDADDELLPGALAALDEHIAAHPDTRMVIGGHISAWPDGKRREDIP 139
>UniRef50_A3HU06 Cluster: UspA; n=1; Algoriphagus sp. PR1|Rep: UspA
- Algoriphagus sp. PR1
Length = 304
Score = 33.1 bits (72), Expect = 6.0
Identities = 20/83 (24%), Positives = 40/83 (48%)
Frame = +3
Query: 117 SHTQATDEVVVLTVATDDNHGLERFLRSAKVYNIDVEVLGKGEEWSGGDMNFPGGGQKVI 296
+H Q + + + + +H L+ FLR AK+ ++D+ ++G+ E G G +K
Sbjct: 75 THHQFPENMEMEVFCEEGDHPLDTFLRWAKIKDVDLIIMGRKETLDGSGSLAKGIAKKAP 134
Query: 297 LLKNRLEKLMKADNKEKIILFTD 365
L++ +KI++ TD
Sbjct: 135 CSILMLQEKRAPGLPKKIMIPTD 157
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,982,382
Number of Sequences: 1657284
Number of extensions: 13346055
Number of successful extensions: 43122
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 40787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43042
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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