Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12b22f
         (648 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043443-1|AAC05668.1|  232|Anopheles gambiae putative pupal-spe...    24   4.8  
AF043437-1|AAC05662.1|  239|Anopheles gambiae putative pupal-spe...    24   4.8  
AF043434-1|AAC05659.1|  232|Anopheles gambiae putative pupal-spe...    24   4.8  
AF043441-1|AAC05666.1|  231|Anopheles gambiae putative pupal-spe...    23   6.3  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    23   8.3  
AY255857-1|AAP13483.1|  216|Anopheles gambiae glutathione tranfe...    23   8.3  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   8.3  

>AF043443-1|AAC05668.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -1

Query: 282 HHRGSSCHHLTTLHPCP-IPRHQYCTLWQN 196
           HH   + HH+ ++H  P I +H    ++Q+
Sbjct: 37  HHAAPAIHHVGSVHAAPAIYQHSAPAIYQH 66


>AF043437-1|AAC05662.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -1

Query: 282 HHRGSSCHHLTTLHPCP-IPRHQYCTLWQN 196
           HH   + HH+ ++H  P I +H    ++Q+
Sbjct: 37  HHAAPAIHHVGSVHAAPAIYQHSAPAIYQH 66


>AF043434-1|AAC05659.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -1

Query: 282 HHRGSSCHHLTTLHPCP-IPRHQYCTLWQN 196
           HH   + HH+ ++H  P I +H    ++Q+
Sbjct: 37  HHAAPAIHHVGSVHAAPAIYQHSAPAIYQH 66


>AF043441-1|AAC05666.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -1

Query: 282 HHRGSSCHHLTTLHPCP-IPRHQYCTLWQNV 193
           HH   + HH+ ++H  P I +H   T+ + +
Sbjct: 37  HHAAPAIHHVGSIHAAPAIYQHSAPTIVKTI 67


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
 Frame = -1

Query: 309 CFSEELLFVHHRGSSCHHLTTLHP---CPIP 226
           C S+  +FV  R   C+H    HP   C IP
Sbjct: 356 CLSDSAIFVQSRN--CNHHHGFHPSTVCKIP 384


>AY255857-1|AAP13483.1|  216|Anopheles gambiae glutathione
           tranferase d9 protein.
          Length = 216

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 179 AMVIVSGNSQHNHFICSLCMTV 114
           A+ ++ G  QH+ F+   C+TV
Sbjct: 134 AVAVLDGILQHSAFVAGDCLTV 155


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 48  MWFTQKMGLFIQLILCVFVILFNSHTQATDEVVVLTV 158
           +W   + G+F   +  + + LF+S   A D V VL V
Sbjct: 353 LWACGQTGIFGVDLPFLHIFLFSSLIAAVDPVAVLAV 389


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 696,756
Number of Sequences: 2352
Number of extensions: 14626
Number of successful extensions: 39
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)