Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12b22f
         (648 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66512-7|CAA91321.1|  730|Caenorhabditis elegans Hypothetical pr...   180   1e-45
U97005-9|AAK72085.1|  829|Caenorhabditis elegans Hypothetical pr...    30   1.6  
U55363-11|AAA97968.1|  299|Caenorhabditis elegans Hypothetical p...    28   5.0  
AF038620-1|AAB93487.1|  256|Caenorhabditis elegans Hypothetical ...    28   5.0  
Z82077-5|CAB63333.1|  783|Caenorhabditis elegans Hypothetical pr...    28   6.6  
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    28   6.6  
AL110485-28|CAD36500.1|  145|Caenorhabditis elegans Hypothetical...    28   6.6  
AL110485-27|CAB60369.3|  515|Caenorhabditis elegans Hypothetical...    28   6.6  
Z81481-6|CAB63435.1|  344|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U41109-12|AAB37043.1|  451|Caenorhabditis elegans Hypothetical p...    27   8.7  
AL022716-2|CAA18772.1|  373|Caenorhabditis elegans Hypothetical ...    27   8.7  
AL022716-1|CAA18770.1|  371|Caenorhabditis elegans Hypothetical ...    27   8.7  

>Z66512-7|CAA91321.1|  730|Caenorhabditis elegans Hypothetical
           protein F52H3.1 protein.
          Length = 730

 Score =  180 bits (437), Expect = 1e-45
 Identities = 88/179 (49%), Positives = 126/179 (70%), Gaps = 4/179 (2%)
 Frame = +3

Query: 123 TQATD--EVVVLTVATDDNHGLERFLRSAKVYNIDVEVLGKGEEWSGGDMNFP-GGGQKV 293
           T  TD  E+VV+TVAT++  GL+R L SAK ++I++EVLG GE+W+GGD     GGGQK+
Sbjct: 17  TTITDLPELVVVTVATENTDGLKRLLESAKAFDINIEVLGLGEKWNGGDTRIEQGGGQKI 76

Query: 294 ILLKNRLEKLMKADNKEKIILFTDSYDVMFLGNLDEIVKKF-KSFPDTRVLFSAEQFCWP 470
            +L + +EK    D  + +I+F D+YDV+F  +   I++KF + + + R+LF AE FCWP
Sbjct: 77  RILSDWIEKYK--DASDTMIMFVDAYDVVFNADSTTILRKFFEHYSEKRLLFGAEPFCWP 134

Query: 471 DAKLATQYPNIEVVSPYLNSGGFIGYLPEIYEIINSNPIKDKDDDQLYYTXIYLDKDLR 647
           D  LA +YP +E    +LNSG F+GY PE+++I+    ++DKDDDQLYYT IYLD+ LR
Sbjct: 135 DQSLAPEYPIVEFGKRFLNSGLFMGYGPEMHKILKLKSVEDKDDDQLYYTMIYLDEKLR 193


>U97005-9|AAK72085.1|  829|Caenorhabditis elegans Hypothetical
           protein F19F10.9 protein.
          Length = 829

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 19/49 (38%), Positives = 27/49 (55%)
 Frame = +3

Query: 303 KNRLEKLMKADNKEKIILFTDSYDVMFLGNLDEIVKKFKSFPDTRVLFS 449
           K +LEK     +KE+ +L T+SYD   LG LD+  KK K      ++ S
Sbjct: 771 KKQLEKRANRKDKEERMLKTNSYDTP-LGTLDKQRKKQKQLSTPYLVLS 818


>U55363-11|AAA97968.1|  299|Caenorhabditis elegans Hypothetical
           protein ZC404.10 protein.
          Length = 299

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 51  WFTQKMGLFIQLILCVFVILFNSHTQATDEVVV 149
           W + K  L I L+LC+ V +F SH    + V +
Sbjct: 153 WQSPKYSLRIALLLCIPVFIFGSHNVLLNHVEI 185


>AF038620-1|AAB93487.1|  256|Caenorhabditis elegans Hypothetical
           protein H10D12.2 protein.
          Length = 256

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 258 GDMNFPGGGQKVILLKNRLEKL 323
           G+ N PGGG +   LKN+LE L
Sbjct: 133 GETNTPGGGSEENTLKNKLEDL 154


>Z82077-5|CAB63333.1|  783|Caenorhabditis elegans Hypothetical
           protein W09C5.7 protein.
          Length = 783

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 6/109 (5%)
 Frame = +3

Query: 159 ATDDNHGLERFLRSAKV-YNIDVEVLGKGEEWSGGDMNFPGGGQKVILLKNRLEKLMKAD 335
           + + +H + R  R   +    D  V+ K +   G       G +K+  +K   EK+ KA+
Sbjct: 80  SAESSHSIRRIERVIAINVKSDGSVI-KSQITPGSGTKLKQGTEKI--MKFFAEKVTKAE 136

Query: 336 NKEKII-----LFTDSYDVMFLGNLDEIVKKFKSFPDTRVLFSAEQFCW 467
            +  ++     LF DS D  F  + D  +   K F       S + F W
Sbjct: 137 PRPALLDDVLKLFNDSKDFYFCRSRDVTISSQKYFEKREAHTSEDSFFW 185


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
            protein T19D12.1 protein.
          Length = 1844

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -3

Query: 289  FCPPPGKFMSPPDHSSPLPNTSTSILYTLA 200
            +CPPP    + P  S+ +P T+  +  T+A
Sbjct: 1202 YCPPPVPSTAAPSTSTAVPTTTVPVTTTIA 1231


>AL110485-28|CAD36500.1|  145|Caenorhabditis elegans Hypothetical
           protein Y46G5A.26b protein.
          Length = 145

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = +3

Query: 51  WFTQKMGLFIQLILCVFVILF--NSHTQATDE 140
           W TQ    F  +I C+F  L   N HTQ TD+
Sbjct: 100 WITQMTFFFGFVIFCLFYFLVYPNIHTQITDD 131


>AL110485-27|CAB60369.3|  515|Caenorhabditis elegans Hypothetical
           protein Y46G5A.26a protein.
          Length = 515

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = +3

Query: 51  WFTQKMGLFIQLILCVFVILF--NSHTQATDE 140
           W TQ    F  +I C+F  L   N HTQ TD+
Sbjct: 470 WITQMTFFFGFVIFCLFYFLVYPNIHTQITDD 501


>Z81481-6|CAB63435.1|  344|Caenorhabditis elegans Hypothetical
           protein C38D9.8 protein.
          Length = 344

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +3

Query: 135 DEVVVLTVATDDNHGLERFLRSAKVYNIDVEVLGKGEEWSG 257
           + +V L   +  NH +  FL+  K  N  +EVL   + W G
Sbjct: 194 NRIVFLDRVSISNHTIRNFLQVLKKSNSQLEVLTIRDSWEG 234


>U41109-12|AAB37043.1|  451|Caenorhabditis elegans Hypothetical
           protein F52E1.10 protein.
          Length = 451

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = +3

Query: 3   VTEVRCSGTVELIFMMWFTQKMGLFIQ--LILCVFVILFNSH 122
           V+ V  +G   L   ++ T+K G  IQ  +I C++++ FN H
Sbjct: 194 VSFVNINGYDSLTHALYSTRKCGFQIQYQIIFCMWLLTFNGH 235


>AL022716-2|CAA18772.1|  373|Caenorhabditis elegans Hypothetical
           protein C24F3.1b protein.
          Length = 373

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -2

Query: 389 PQEHDVITVSEKYYFLFVVSF--HQLLKPVFQK 297
           P EH V++ + K YF+F +S+  HQ  +   QK
Sbjct: 166 PTEHRVMSAAYKLYFIFQISYWIHQFPEFYLQK 198


>AL022716-1|CAA18770.1|  371|Caenorhabditis elegans Hypothetical
           protein C24F3.1a protein.
          Length = 371

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -2

Query: 389 PQEHDVITVSEKYYFLFVVSF--HQLLKPVFQK 297
           P EH V++ + K YF+F +S+  HQ  +   QK
Sbjct: 164 PTEHRVMSAAYKLYFIFQISYWIHQFPEFYLQK 196


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,412,862
Number of Sequences: 27780
Number of extensions: 338830
Number of successful extensions: 1154
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)