Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12b21r
(710 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50308-3|AAW88404.1| 1392|Caenorhabditis elegans Gut granule los... 50 2e-06
AC025721-10|AAK29908.2| 1019|Caenorhabditis elegans Hypothetical... 48 9e-06
AC025716-18|AAT81178.1| 998|Caenorhabditis elegans Hypothetical... 46 2e-05
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 45 5e-05
AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ... 45 5e-05
Z83115-1|CAB05555.1| 178|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z54327-1|CAA91119.1| 569|Caenorhabditis elegans Hypothetical pr... 36 0.029
Z82080-8|CAD92382.3| 404|Caenorhabditis elegans Hypothetical pr... 31 0.61
AL032625-7|CAN86642.1| 404|Caenorhabditis elegans Hypothetical ... 31 0.61
AL023854-1|CAH60790.2| 404|Caenorhabditis elegans Hypothetical ... 31 0.61
AF022981-10|AAG24203.1| 360|Caenorhabditis elegans Serpentine r... 29 2.5
U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical pr... 28 7.6
>U50308-3|AAW88404.1| 1392|Caenorhabditis elegans Gut granule loss
protein 4 protein.
Length = 1392
Score = 49.6 bits (113), Expect = 2e-06
Identities = 39/119 (32%), Positives = 52/119 (43%), Gaps = 3/119 (2%)
Frame = -2
Query: 481 HSMALSEFGDLYVWGLNDTGQLGIKESENDLKSYALPKLVDLYDDNEEVHLQIKDIACGS 302
H + LS G L WG N GQ G+ S + + L + D I+ IACG
Sbjct: 787 HILVLSSSGQLSAWGGNRFGQCGVGHS------FRIANLHQVDGDWPA----IEKIACGQ 836
Query: 301 KHSVLLLEDGSVWTTGANKYGQLACPQYPNSKNFNKVCV---IKEACRLKCGPWTTVVV 134
HS + DGS+WT G +GQL NS V I + ++ CG TVV+
Sbjct: 837 FHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICKVTQIACGRAHTVVL 895
Score = 37.9 bits (84), Expect = 0.007
Identities = 25/84 (29%), Positives = 40/84 (47%)
Frame = -2
Query: 484 WHSMALSEFGDLYVWGLNDTGQLGIKESENDLKSYALPKLVDLYDDNEEVHLQIKDIACG 305
+HS + G L+ +G GQLG N + +P V+ + ++ IACG
Sbjct: 837 FHSAFICSDGSLWTFGWGVWGQLGHGGRNNS--NQLVPTRVN------GLICKVTQIACG 888
Query: 304 SKHSVLLLEDGSVWTTGANKYGQL 233
H+V+L + G V G+ YGQ+
Sbjct: 889 RAHTVVLTDTGRVLVCGSGSYGQM 912
Score = 35.5 bits (78), Expect = 0.038
Identities = 21/82 (25%), Positives = 39/82 (47%)
Frame = -2
Query: 481 HSMALSEFGDLYVWGLNDTGQLGIKESENDLKSYALPKLVDLYDDNEEVHLQIKDIACGS 302
HS ++ G LY WG QLG ++ + +++ N + +++ G+
Sbjct: 1033 HSALITSEGTLYTWGKGLDYQLGHGNKNERMEPH------QVFEPNGAKWV---NVSLGN 1083
Query: 301 KHSVLLLEDGSVWTTGANKYGQ 236
H++ +DGSV+ G N +GQ
Sbjct: 1084 NHTIASTDDGSVFAWGKNDFGQ 1105
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = -2
Query: 316 IACGSKHSVLLLEDGSVWTTGANKYGQLACPQYPNSKNFNKVCVIKEAC-RLKCGPWTTV 140
IACG++H ++L G + G N++GQ N ++V A ++ CG + +
Sbjct: 781 IACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDGDWPAIEKIACGQFHSA 840
Query: 139 VVCN 128
+C+
Sbjct: 841 FICS 844
Score = 31.9 bits (69), Expect = 0.47
Identities = 22/78 (28%), Positives = 39/78 (50%)
Frame = -2
Query: 481 HSMALSEFGDLYVWGLNDTGQLGIKESENDLKSYALPKLVDLYDDNEEVHLQIKDIACGS 302
H++ L++ G + V G GQ+G+ ++D+K V + L+++DIA
Sbjct: 891 HTVVLTDTGRVLVCGSGSYGQMGV---DDDIKK------VFAFTPLPLGPLRVRDIATHY 941
Query: 301 KHSVLLLEDGSVWTTGAN 248
HS+ + ED V+ G N
Sbjct: 942 YHSICITEDNRVFEWGRN 959
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 325 IKDIACGSKHSVLLLEDGSVWTTG 254
I +ACG HS L+ +G+++T G
Sbjct: 1024 IVSVACGLSHSALITSEGTLYTWG 1047
>AC025721-10|AAK29908.2| 1019|Caenorhabditis elegans Hypothetical
protein Y48G8AL.1 protein.
Length = 1019
Score = 47.6 bits (108), Expect = 9e-06
Identities = 33/111 (29%), Positives = 50/111 (45%)
Frame = -2
Query: 568 QDDTSNLETPTQVEXXXXXXXXXXXXXGWHSMALSEFGDLYVWGLNDTGQLGIKESENDL 389
Q D + P VE H +ALS G ++ WG N++G+LGI +DL
Sbjct: 172 QADGRCIHRPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGI----DDL 227
Query: 388 KSYALPKLVDLYDDNEEVHLQIKDIACGSKHSVLLLEDGSVWTTGANKYGQ 236
+ + V D L + + ACG H+VLL G ++ G++ GQ
Sbjct: 228 RPQTSVQHVHQMDG-----LGVVEAACGDNHTVLLTHCGRTFSFGSDALGQ 273
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/69 (31%), Positives = 40/69 (57%)
Frame = -2
Query: 439 GLNDTGQLGIKESENDLKSYALPKLVDLYDDNEEVHLQIKDIACGSKHSVLLLEDGSVWT 260
G GQLG++ SE+ ++ +P+ + + N+ + + CG +H+V L +DG +W+
Sbjct: 9 GHTGEGQLGVRLSESTIQ---VPERI-IGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWS 64
Query: 259 TGANKYGQL 233
G+N GQL
Sbjct: 65 VGSNMDGQL 73
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/82 (29%), Positives = 41/82 (50%)
Frame = -2
Query: 481 HSMALSEFGDLYVWGLNDTGQLGIKESENDLKSYALPKLVDLYDDNEEVHLQIKDIACGS 302
H++++++ G ++ WG N+ GQLG+ E+ P+ V +D I +A GS
Sbjct: 105 HTVSVTDDGRVFAWGSNEHGQLGM---ESKFTWQGTPRRVQEIND-------IVQVASGS 154
Query: 301 KHSVLLLEDGSVWTTGANKYGQ 236
H + L E G V+ G G+
Sbjct: 155 NHCIALDEGGRVFVWGEQADGR 176
Score = 35.9 bits (79), Expect = 0.029
Identities = 25/83 (30%), Positives = 46/83 (55%)
Frame = -2
Query: 481 HSMALSEFGDLYVWGLNDTGQLGIKESENDLKSYALPKLVDLYDDNEEVHLQIKDIACGS 302
H++ L++ G ++ G N GQLG + S + S+++ Y + +I I+ G
Sbjct: 52 HTVFLTKDGKMWSVGSNMDGQLG-RGSRTE-GSFSI------YPVSWTSSAKIIQISAGR 103
Query: 301 KHSVLLLEDGSVWTTGANKYGQL 233
H+V + +DG V+ G+N++GQL
Sbjct: 104 SHTVSVTDDGRVFAWGSNEHGQL 126
>AC025716-18|AAT81178.1| 998|Caenorhabditis elegans Hypothetical
protein Y39G10AR.3 protein.
Length = 998
Score = 46.4 bits (105), Expect = 2e-05
Identities = 43/143 (30%), Positives = 58/143 (40%)
Frame = -2
Query: 577 QLGQDDTSNLETPTQVEXXXXXXXXXXXXXGWHSMALSEFGDLYVWGLNDTGQLGIKESE 398
QLG S +E VE + S+ + G L +G LG
Sbjct: 498 QLGFGKFSKMENGRLVESLKGRDIQSVGVGNYFSVICCDRGTLLTFGTAKNLGLG----- 552
Query: 397 NDLKSYALPKLVDLYDDNEEVHLQIKDIACGSKHSVLLLEDGSVWTTGANKYGQLACPQY 218
D K A P L++ + + IKDI CG H V +LE G G+N+YGQL P
Sbjct: 553 KDAKDSAKPMLLE-----QLLRENIKDIYCGHDHVVAVLESGECLGWGSNQYGQLGLPTL 607
Query: 217 PNSKNFNKVCVIKEACRLKCGPW 149
+ KV + EA L GP+
Sbjct: 608 EHFFAPTKVFFLNEATAL-YGPF 629
Score = 39.1 bits (87), Expect = 0.003
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Frame = -2
Query: 481 HSMALSEFGDLYVWGLNDTGQLGIKESEN---DLKSYALPKLVDLYDDNEEVHLQIKDIA 311
H +A+ E G+ WG N GQLG+ E+ K + L + LY + K I
Sbjct: 581 HVVAVLESGECLGWGSNQYGQLGLPTLEHFFAPTKVFFLNEATALYGPFQIPMPSNKKIV 640
Query: 310 ---CGSKHSVLLLEDGSVWTTGANKYGQLACPQ 221
G ++LL +DGS+ G+NK+ +L Q
Sbjct: 641 YGKAGKDATMLLSDDGSLIAMGSNKHNKLNLTQ 673
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 45.2 bits (102), Expect = 5e-05
Identities = 32/87 (36%), Positives = 45/87 (51%)
Frame = -2
Query: 484 WHSMALSEFGDLYVWGLNDTGQLGIKESENDLKSYALPKLVDLYDDNEEVHLQIKDIACG 305
+H++ L+ ++ +G N GQLG+ D S P+ V L D I +A G
Sbjct: 777 FHTVLLASDRRVFTFGSNCHGQLGV----GDTLSKNTPQQVILPSDTV-----IVQVAAG 827
Query: 304 SKHSVLLLEDGSVWTTGANKYGQLACP 224
S H++L DGSV+T GA GQLA P
Sbjct: 828 SNHTILRANDGSVFTFGAFGKGQLARP 854
Score = 36.3 bits (80), Expect = 0.022
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = -2
Query: 331 LQIKDIACGSKHSVLLLEDGSVWTTGANKYGQL 233
+++ ++CG+ H+VLL D V+T G+N +GQL
Sbjct: 767 VKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQL 799
Score = 31.1 bits (67), Expect = 0.81
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 481 HSMALSEFGDLYVWGLNDTGQLGIKESENDLKS 383
H +A++ G L+ WGLN+ Q G ES + S
Sbjct: 624 HGVAVTRNGHLFTWGLNNMNQCGRVESTSTTSS 656
>AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical
protein F07B7.12 protein.
Length = 1900
Score = 45.2 bits (102), Expect = 5e-05
Identities = 32/87 (36%), Positives = 45/87 (51%)
Frame = -2
Query: 484 WHSMALSEFGDLYVWGLNDTGQLGIKESENDLKSYALPKLVDLYDDNEEVHLQIKDIACG 305
+H++ L+ ++ +G N GQLG+ D S P+ V L D I +A G
Sbjct: 777 FHTVLLASDRRVFTFGSNCHGQLGV----GDTLSKNTPQQVILPSDTV-----IVQVAAG 827
Query: 304 SKHSVLLLEDGSVWTTGANKYGQLACP 224
S H++L DGSV+T GA GQLA P
Sbjct: 828 SNHTILRANDGSVFTFGAFGKGQLARP 854
Score = 36.3 bits (80), Expect = 0.022
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = -2
Query: 331 LQIKDIACGSKHSVLLLEDGSVWTTGANKYGQL 233
+++ ++CG+ H+VLL D V+T G+N +GQL
Sbjct: 767 VKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQL 799
Score = 31.1 bits (67), Expect = 0.81
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 481 HSMALSEFGDLYVWGLNDTGQLGIKESENDLKS 383
H +A++ G L+ WGLN+ Q G ES + S
Sbjct: 624 HGVAVTRNGHLFTWGLNNMNQCGRVESTSTTSS 656
>Z83115-1|CAB05555.1| 178|Caenorhabditis elegans Hypothetical
protein K11D2.1 protein.
Length = 178
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/65 (36%), Positives = 32/65 (49%)
Frame = -2
Query: 583 RLQLGQDDTSNLETPTQVEXXXXXXXXXXXXXGWHSMALSEFGDLYVWGLNDTGQLGIKE 404
R +LG ++ P +E GWH++AL+E GD Y WG N GQLG K+
Sbjct: 110 RGELGVGLIRRVDEPVHIEQLVGIRIKKVACGGWHTVALTEGGDAYTWGWNRYGQLG-KD 168
Query: 403 SENDL 389
N L
Sbjct: 169 KVNFL 173
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = -2
Query: 337 VHLQIKDIACGSKHSVLLLEDGSVWTTGANKYGQL 233
V ++IK +ACG H+V L E G +T G N+YGQL
Sbjct: 131 VGIRIKKVACGGWHTVALTEGGDAYTWGWNRYGQL 165
>Z54327-1|CAA91119.1| 569|Caenorhabditis elegans Hypothetical
protein C26D10.1 protein.
Length = 569
Score = 35.9 bits (79), Expect = 0.029
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -2
Query: 478 SMALSEFGDLYVWGLNDTGQLGIKESENDLKSYALPK 368
S+A SE G Y WG + TGQLG+ + D K + P+
Sbjct: 504 SIAWSEDGTAYAWGFDTTGQLGLGLKDEDEKMVSKPE 540
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2
Query: 463 EFGDLYVWGLNDTGQLGIKESENDL 389
E G Y +GLN+ QLGIK E D+
Sbjct: 386 EDGKYYAFGLNNYAQLGIKVDEADV 410
>Z82080-8|CAD92382.3| 404|Caenorhabditis elegans Hypothetical
protein W09G3.7a protein.
Length = 404
Score = 31.5 bits (68), Expect = 0.61
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = -2
Query: 562 DTSNLETPTQVEXXXXXXXXXXXXXGWHSM--ALSEFGDLYVWGLNDTGQLGIKESENDL 389
+ +L+TPTQ++ +S A++E G L++WG N LG+ + L
Sbjct: 319 EAESLKTPTQMDQPLFDGKMVTSVSAGNSCMSAINEDGRLFIWGENRYSSLGLGHQKRQL 378
Query: 388 KSYAL 374
Y L
Sbjct: 379 FPYQL 383
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = -2
Query: 475 MALSEFGDLYVWGLNDTGQLGIKESENDLKSYALPKLVD--LYDDNEEVHLQIKDIACGS 302
+A + G+++VWG+ G LG+ LK+ P +D L+D + ++ G+
Sbjct: 298 VARNSRGNVFVWGV---GVLGMGPEAESLKT---PTQMDQPLFDGK-----MVTSVSAGN 346
Query: 301 KHSVLLLEDGSVWTTGANKYGQL 233
+ EDG ++ G N+Y L
Sbjct: 347 SCMSAINEDGRLFIWGENRYSSL 369
>AL032625-7|CAN86642.1| 404|Caenorhabditis elegans Hypothetical
protein W09G3.7a protein.
Length = 404
Score = 31.5 bits (68), Expect = 0.61
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = -2
Query: 562 DTSNLETPTQVEXXXXXXXXXXXXXGWHSM--ALSEFGDLYVWGLNDTGQLGIKESENDL 389
+ +L+TPTQ++ +S A++E G L++WG N LG+ + L
Sbjct: 319 EAESLKTPTQMDQPLFDGKMVTSVSAGNSCMSAINEDGRLFIWGENRYSSLGLGHQKRQL 378
Query: 388 KSYAL 374
Y L
Sbjct: 379 FPYQL 383
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = -2
Query: 475 MALSEFGDLYVWGLNDTGQLGIKESENDLKSYALPKLVD--LYDDNEEVHLQIKDIACGS 302
+A + G+++VWG+ G LG+ LK+ P +D L+D + ++ G+
Sbjct: 298 VARNSRGNVFVWGV---GVLGMGPEAESLKT---PTQMDQPLFDGK-----MVTSVSAGN 346
Query: 301 KHSVLLLEDGSVWTTGANKYGQL 233
+ EDG ++ G N+Y L
Sbjct: 347 SCMSAINEDGRLFIWGENRYSSL 369
>AL023854-1|CAH60790.2| 404|Caenorhabditis elegans Hypothetical
protein W09G3.7a protein.
Length = 404
Score = 31.5 bits (68), Expect = 0.61
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = -2
Query: 562 DTSNLETPTQVEXXXXXXXXXXXXXGWHSM--ALSEFGDLYVWGLNDTGQLGIKESENDL 389
+ +L+TPTQ++ +S A++E G L++WG N LG+ + L
Sbjct: 319 EAESLKTPTQMDQPLFDGKMVTSVSAGNSCMSAINEDGRLFIWGENRYSSLGLGHQKRQL 378
Query: 388 KSYAL 374
Y L
Sbjct: 379 FPYQL 383
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = -2
Query: 475 MALSEFGDLYVWGLNDTGQLGIKESENDLKSYALPKLVD--LYDDNEEVHLQIKDIACGS 302
+A + G+++VWG+ G LG+ LK+ P +D L+D + ++ G+
Sbjct: 298 VARNSRGNVFVWGV---GVLGMGPEAESLKT---PTQMDQPLFDGK-----MVTSVSAGN 346
Query: 301 KHSVLLLEDGSVWTTGANKYGQL 233
+ EDG ++ G N+Y L
Sbjct: 347 SCMSAINEDGRLFIWGENRYSSL 369
>AF022981-10|AAG24203.1| 360|Caenorhabditis elegans Serpentine
receptor, class h protein82 protein.
Length = 360
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Frame = +1
Query: 100 GFISIFTYINCIQLQLSMVH------ISVYMLL*LHRPY*SFLSLDIVGMLVVH 243
GF F Y N LS++H IS +++L +H+PY F+ L VVH
Sbjct: 280 GFSVGFKYYNQALTNLSVLHASLHGLISTFVVLIIHKPYRQFIILIFKSPSVVH 333
>U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical
protein D2092.5 protein.
Length = 908
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -2
Query: 652 YLCLLFTTTMEYYVAGSNLFNQWRLQLGQDDTSN 551
Y +L T +M YY FN+W+L+ Q D SN
Sbjct: 226 YPVILITVSMHYY------FNEWKLRRKQCDVSN 253
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,834,310
Number of Sequences: 27780
Number of extensions: 348040
Number of successful extensions: 845
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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