Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12b20r
         (710 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119176-1|AAM51036.1|  408|Drosophila melanogaster RH61522p pro...   164   1e-40
AL031581-9|CAA20887.1|  408|Drosophila melanogaster EG:115C2.8 p...   164   1e-40
AE014298-83|AAF45535.2|  408|Drosophila melanogaster CG13367-PA ...   164   1e-40
AY082967-2|AAL92714.1|  353|Drosophila melanogaster CG13367 trun...   110   2e-24
X66982-1|CAA47391.1|  577|Drosophila melanogaster factor 5 protein.    33   0.38 
AY051733-1|AAK93157.1|  577|Drosophila melanogaster LD26157p pro...    33   0.38 
AE014297-456|AAF54125.1|  577|Drosophila melanogaster CG10281-PA...    33   0.38 
AY058278-1|AAL13507.1|  790|Drosophila melanogaster GH03106p pro...    31   2.0  
AF032401-1|AAB94890.1| 1398|Drosophila melanogaster circadian cl...    31   2.0  
AE014134-621|AAN10372.2|  914|Drosophila melanogaster CG3234-PC,...    31   2.0  
AE014134-618|AAF51098.4| 1398|Drosophila melanogaster CG3234-PB,...    31   2.0  
AE014134-617|AAN10371.2| 1421|Drosophila melanogaster CG3234-PD,...    31   2.0  
X73975-1|CAA52155.1| 1146|Drosophila melanogaster integrin protein.    29   6.2  
AY734458-1|AAW64468.1|  660|Drosophila melanogaster Golgi-locali...    29   6.2  
AY058693-1|AAL13922.1|  660|Drosophila melanogaster LD41311p pro...    29   6.2  
AE014298-1866|AAF48242.2| 1146|Drosophila melanogaster CG1771-PB...    29   6.2  
AE014298-1348|AAF46508.2|  660|Drosophila melanogaster CG3002-PB...    29   6.2  

>AY119176-1|AAM51036.1|  408|Drosophila melanogaster RH61522p
           protein.
          Length = 408

 Score =  164 bits (398), Expect = 1e-40
 Identities = 77/151 (50%), Positives = 104/151 (68%), Gaps = 5/151 (3%)
 Frame = -3

Query: 450 RGRRSLFKRQPLKAPXXXXXXXTSDSVFYQGMYMQVGDIVSMTDIDGGTYYAQIRGFLTD 271
           R RR+LFK+   K P          S+F++G Y+Q+GDIVS+ D +   YYAQIRG L D
Sbjct: 248 RNRRALFKKPAQKTPKVQASTRFVRSLFHKGSYIQIGDIVSIVDSEQNLYYAQIRGLLVD 307

Query: 270 EYCEKSAAVTWLLPTKASPPPEKCFDPATYIIGPEEELPRKLEYMEFVMHAPSDYYKASN 91
            YCEKSA +TWL+PT+ SP P++ FDP TY+IGP+EEL RKL Y+EFVMHAPS+YY   +
Sbjct: 308 AYCEKSAFLTWLIPTQDSPDPQEGFDPPTYLIGPDEELSRKLCYLEFVMHAPSNYYFDRS 367

Query: 90  SPYPLTDNELNNYT-----GFVWTSMEAKER 13
           +P+PL D  ++ YT     G++WT +   +R
Sbjct: 368 TPFPLPD--VDEYTAQRSGGYIWTRLPIVKR 396


>AL031581-9|CAA20887.1|  408|Drosophila melanogaster EG:115C2.8
           protein.
          Length = 408

 Score =  164 bits (398), Expect = 1e-40
 Identities = 77/151 (50%), Positives = 104/151 (68%), Gaps = 5/151 (3%)
 Frame = -3

Query: 450 RGRRSLFKRQPLKAPXXXXXXXTSDSVFYQGMYMQVGDIVSMTDIDGGTYYAQIRGFLTD 271
           R RR+LFK+   K P          S+F++G Y+Q+GDIVS+ D +   YYAQIRG L D
Sbjct: 248 RNRRALFKKPAQKTPKVQASTRFVRSLFHKGSYIQIGDIVSIVDSEQNLYYAQIRGLLVD 307

Query: 270 EYCEKSAAVTWLLPTKASPPPEKCFDPATYIIGPEEELPRKLEYMEFVMHAPSDYYKASN 91
            YCEKSA +TWL+PT+ SP P++ FDP TY+IGP+EEL RKL Y+EFVMHAPS+YY   +
Sbjct: 308 AYCEKSAFLTWLIPTQDSPDPQEGFDPPTYLIGPDEELSRKLCYLEFVMHAPSNYYFDRS 367

Query: 90  SPYPLTDNELNNYT-----GFVWTSMEAKER 13
           +P+PL D  ++ YT     G++WT +   +R
Sbjct: 368 TPFPLPD--VDEYTAQRSGGYIWTRLPIVKR 396


>AE014298-83|AAF45535.2|  408|Drosophila melanogaster CG13367-PA
           protein.
          Length = 408

 Score =  164 bits (398), Expect = 1e-40
 Identities = 77/151 (50%), Positives = 104/151 (68%), Gaps = 5/151 (3%)
 Frame = -3

Query: 450 RGRRSLFKRQPLKAPXXXXXXXTSDSVFYQGMYMQVGDIVSMTDIDGGTYYAQIRGFLTD 271
           R RR+LFK+   K P          S+F++G Y+Q+GDIVS+ D +   YYAQIRG L D
Sbjct: 248 RNRRALFKKPAQKTPKVQASTRFVRSLFHKGSYIQIGDIVSIVDSEQNLYYAQIRGLLVD 307

Query: 270 EYCEKSAAVTWLLPTKASPPPEKCFDPATYIIGPEEELPRKLEYMEFVMHAPSDYYKASN 91
            YCEKSA +TWL+PT+ SP P++ FDP TY+IGP+EEL RKL Y+EFVMHAPS+YY   +
Sbjct: 308 AYCEKSAFLTWLIPTQDSPDPQEGFDPPTYLIGPDEELSRKLCYLEFVMHAPSNYYFDRS 367

Query: 90  SPYPLTDNELNNYT-----GFVWTSMEAKER 13
           +P+PL D  ++ YT     G++WT +   +R
Sbjct: 368 TPFPLPD--VDEYTAQRSGGYIWTRLPIVKR 396


>AY082967-2|AAL92714.1|  353|Drosophila melanogaster CG13367
           truncation 2 protein.
          Length = 353

 Score =  110 bits (264), Expect = 2e-24
 Identities = 49/93 (52%), Positives = 64/93 (68%)
 Frame = -3

Query: 450 RGRRSLFKRQPLKAPXXXXXXXTSDSVFYQGMYMQVGDIVSMTDIDGGTYYAQIRGFLTD 271
           R RR+LFK+   K P          S+F++G Y+Q+GDIVS+ D +   YYAQIRG L D
Sbjct: 248 RNRRALFKKPAQKTPKVQASTRFVRSLFHKGSYIQIGDIVSIVDSEQNLYYAQIRGLLVD 307

Query: 270 EYCEKSAAVTWLLPTKASPPPEKCFDPATYIIG 172
            YCEKSA +TWL+PT+ SP P++ FDP TY+IG
Sbjct: 308 AYCEKSAFLTWLIPTQDSPDPQEGFDPPTYLIG 340


>X66982-1|CAA47391.1|  577|Drosophila melanogaster factor 5 protein.
          Length = 577

 Score = 33.1 bits (72), Expect = 0.38
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = -3

Query: 651 VTPKESKLDSSIKTDCEDIKEDKDNGKNEESTPAKATGKGTRKSTRSTR 505
           +T  +  +DS  ++D ED +EDK   + E+S   KA GKG + + +  +
Sbjct: 237 ITDMDEWIDSEDESDSED-EEDKKKKEQEDSDDGKAKGKGKKGADKKKK 284


>AY051733-1|AAK93157.1|  577|Drosophila melanogaster LD26157p
           protein.
          Length = 577

 Score = 33.1 bits (72), Expect = 0.38
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = -3

Query: 651 VTPKESKLDSSIKTDCEDIKEDKDNGKNEESTPAKATGKGTRKSTRSTR 505
           +T  +  +DS  ++D ED +EDK   + E+S   KA GKG + + +  +
Sbjct: 237 ITDMDEWIDSEDESDSED-EEDKKKKEQEDSDDGKAKGKGKKGADKKKK 284


>AE014297-456|AAF54125.1|  577|Drosophila melanogaster CG10281-PA
           protein.
          Length = 577

 Score = 33.1 bits (72), Expect = 0.38
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = -3

Query: 651 VTPKESKLDSSIKTDCEDIKEDKDNGKNEESTPAKATGKGTRKSTRSTR 505
           +T  +  +DS  ++D ED +EDK   + E+S   KA GKG + + +  +
Sbjct: 237 ITDMDEWIDSEDESDSED-EEDKKKKEQEDSDDGKAKGKGKKGADKKKK 284


>AY058278-1|AAL13507.1|  790|Drosophila melanogaster GH03106p
           protein.
          Length = 790

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 19/66 (28%), Positives = 27/66 (40%)
 Frame = -3

Query: 705 LWRSAENGQICNDCHFSTVTPKESKLDSSIKTDCEDIKEDKDNGKNEESTPAKATGKGTR 526
           LW  A   +   D   +T  PK+   DSS     +   +  DNG N      +  G G R
Sbjct: 145 LWFEASLSESSEDNESNTSPPKQGSGDSSPMLTSDPTSDSSDNGSN-----GRGMGGGMR 199

Query: 525 KSTRST 508
           + T +T
Sbjct: 200 EGTAAT 205


>AF032401-1|AAB94890.1| 1398|Drosophila melanogaster circadian clock
           protein protein.
          Length = 1398

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 19/66 (28%), Positives = 27/66 (40%)
 Frame = -3

Query: 705 LWRSAENGQICNDCHFSTVTPKESKLDSSIKTDCEDIKEDKDNGKNEESTPAKATGKGTR 526
           LW  A   +   D   +T  PK+   DSS     +   +  DNG N      +  G G R
Sbjct: 246 LWFEASLSESSEDNESNTSPPKQGSGDSSPMLTSDPTSDSSDNGSN-----GRGMGGGMR 300

Query: 525 KSTRST 508
           + T +T
Sbjct: 301 EGTAAT 306


>AE014134-621|AAN10372.2|  914|Drosophila melanogaster CG3234-PC,
           isoform C protein.
          Length = 914

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 19/66 (28%), Positives = 27/66 (40%)
 Frame = -3

Query: 705 LWRSAENGQICNDCHFSTVTPKESKLDSSIKTDCEDIKEDKDNGKNEESTPAKATGKGTR 526
           LW  A   +   D   +T  PK+   DSS     +   +  DNG N      +  G G R
Sbjct: 269 LWFEASLSESSEDNESNTSPPKQGSGDSSPMLTSDPTSDSSDNGSN-----GRGMGGGMR 323

Query: 525 KSTRST 508
           + T +T
Sbjct: 324 EGTAAT 329


>AE014134-618|AAF51098.4| 1398|Drosophila melanogaster CG3234-PB,
           isoform B protein.
          Length = 1398

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 19/66 (28%), Positives = 27/66 (40%)
 Frame = -3

Query: 705 LWRSAENGQICNDCHFSTVTPKESKLDSSIKTDCEDIKEDKDNGKNEESTPAKATGKGTR 526
           LW  A   +   D   +T  PK+   DSS     +   +  DNG N      +  G G R
Sbjct: 246 LWFEASLSESSEDNESNTSPPKQGSGDSSPMLTSDPTSDSSDNGSN-----GRGMGGGMR 300

Query: 525 KSTRST 508
           + T +T
Sbjct: 301 EGTAAT 306


>AE014134-617|AAN10371.2| 1421|Drosophila melanogaster CG3234-PD,
           isoform D protein.
          Length = 1421

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 19/66 (28%), Positives = 27/66 (40%)
 Frame = -3

Query: 705 LWRSAENGQICNDCHFSTVTPKESKLDSSIKTDCEDIKEDKDNGKNEESTPAKATGKGTR 526
           LW  A   +   D   +T  PK+   DSS     +   +  DNG N      +  G G R
Sbjct: 269 LWFEASLSESSEDNESNTSPPKQGSGDSSPMLTSDPTSDSSDNGSN-----GRGMGGGMR 323

Query: 525 KSTRST 508
           + T +T
Sbjct: 324 EGTAAT 329


>X73975-1|CAA52155.1| 1146|Drosophila melanogaster integrin protein.
          Length = 1146

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
 Frame = -3

Query: 705 LWRSAENGQICNDCHFSTVTPKESKLDSSIKTDC--EDIKEDKDNGKNEESTPAKATGKG 532
           LWR     Q  +DC    +T      DS I +    ++IKED+  G    S P +A G G
Sbjct: 93  LWRCPMT-QRFDDCE-QVITDGRRNFDSEILSPPGNDEIKEDQWMGVTVRSNPLQANGSG 150

Query: 531 TRKSTRSTRY 502
            +    + RY
Sbjct: 151 GKVIVCAHRY 160


>AY734458-1|AAW64468.1|  660|Drosophila melanogaster
           Golgi-localizing gamma-ear-containingARF-binding protein
           protein.
          Length = 660

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -3

Query: 291 IRGFLTDEYCEKSAAVTWLLPTKASPPPEKCFDPATYI 178
           +R F  +   +K   V  L PT +  PP K F PAT I
Sbjct: 579 VRDFQFEASVKKPCKVRLLTPTDSQMPPHKPFRPATPI 616


>AY058693-1|AAL13922.1|  660|Drosophila melanogaster LD41311p
           protein.
          Length = 660

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -3

Query: 291 IRGFLTDEYCEKSAAVTWLLPTKASPPPEKCFDPATYI 178
           +R F  +   +K   V  L PT +  PP K F PAT I
Sbjct: 579 VRDFQFEASVKKPCKVRLLTPTDSQMPPHKPFRPATPI 616


>AE014298-1866|AAF48242.2| 1146|Drosophila melanogaster CG1771-PB,
           isoform B protein.
          Length = 1146

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
 Frame = -3

Query: 705 LWRSAENGQICNDCHFSTVTPKESKLDSSIKTDC--EDIKEDKDNGKNEESTPAKATGKG 532
           LWR     Q  +DC    +T      DS I +    ++IKED+  G    S P +A G G
Sbjct: 93  LWRCPMT-QRFDDCE-QVITDGRRNFDSEILSPPGNDEIKEDQWMGVTVRSNPLQANGSG 150

Query: 531 TRKSTRSTRY 502
            +    + RY
Sbjct: 151 GKVIVCAHRY 160


>AE014298-1348|AAF46508.2|  660|Drosophila melanogaster CG3002-PB
           protein.
          Length = 660

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -3

Query: 291 IRGFLTDEYCEKSAAVTWLLPTKASPPPEKCFDPATYI 178
           +R F  +   +K   V  L PT +  PP K F PAT I
Sbjct: 579 VRDFQFEASVKKPCKVRLLTPTDSQMPPHKPFRPATPI 616


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,840,975
Number of Sequences: 53049
Number of extensions: 607079
Number of successful extensions: 2205
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2205
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)