Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12b20f
(656 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-1|CAB04516.1| 242|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z69663-3|CAA93510.2| 226|Caenorhabditis elegans Hypothetical pr... 32 0.31
AF146517-1|AAD33964.1| 226|Caenorhabditis elegans GATA transcri... 32 0.31
AF068708-10|ABR92612.1| 116|Caenorhabditis elegans Erythroid-li... 31 0.72
AF068708-9|AAC17756.1| 198|Caenorhabditis elegans Erythroid-lik... 31 0.72
Z49867-3|CAA90029.2| 433|Caenorhabditis elegans Hypothetical pr... 31 0.95
U25175-1|AAC36130.1| 433|Caenorhabditis elegans GATA-factor pro... 31 0.95
AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical ... 31 0.95
Z50027-5|CAD44111.1| 72|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z81555-3|CAB04513.1| 221|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF026555-1|AAB97516.1| 221|Caenorhabditis elegans GATA transcri... 29 2.2
AC091267-2|AAK31564.2| 1133|Caenorhabditis elegans Hypothetical ... 29 2.2
U70857-11|AAN84874.1| 295|Caenorhabditis elegans Hypothetical p... 29 2.9
U70857-10|AAB09175.1| 385|Caenorhabditis elegans Hypothetical p... 29 2.9
Z68221-5|CAJ30235.1| 416|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z68221-4|CAJ30234.1| 488|Caenorhabditis elegans Hypothetical pr... 29 3.8
X57834-1|CAA40967.1| 416|Caenorhabditis elegans elt-1 protein. 29 3.8
AY462219-1|AAR26006.1| 358|Caenorhabditis elegans GATA transcri... 28 5.1
AF353302-1|AAK32716.1| 376|Caenorhabditis elegans GATA-like tra... 28 5.1
AF067612-7|AAD36952.2| 376|Caenorhabditis elegans Egg laying de... 28 5.1
Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical p... 27 8.9
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 27 8.9
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 27 8.9
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 8.9
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 8.9
>Z81555-1|CAB04516.1| 242|Caenorhabditis elegans Hypothetical
protein F58E10.5 protein.
Length = 242
Score = 32.7 bits (71), Expect = 0.24
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 135 CSQCGTNDSMLWRSAENGQI-CNDCH 209
CS CG ++ LWR E G+ CN C+
Sbjct: 179 CSNCGCRETKLWRRNEQGETECNPCN 204
>Z69663-3|CAA93510.2| 226|Caenorhabditis elegans Hypothetical
protein K02B9.4 protein.
Length = 226
Score = 32.3 bits (70), Expect = 0.31
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +3
Query: 132 ICSQCGTNDSMLW-RSAENGQICNDCH 209
ICS C T ++ LW R+ E G CN C+
Sbjct: 152 ICSNCKTRETTLWRRNGEGGVECNACN 178
>AF146517-1|AAD33964.1| 226|Caenorhabditis elegans GATA
transcription factor ELT-3 protein.
Length = 226
Score = 32.3 bits (70), Expect = 0.31
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +3
Query: 132 ICSQCGTNDSMLW-RSAENGQICNDCH 209
ICS C T ++ LW R+ E G CN C+
Sbjct: 152 ICSNCKTRETTLWRRNGEGGVECNACN 178
>AF068708-10|ABR92612.1| 116|Caenorhabditis elegans Erythroid-like
transcription factorfamily protein 7, isoform b protein.
Length = 116
Score = 31.1 bits (67), Expect = 0.72
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +3
Query: 105 KNTNIMPKPICSQCGTNDSMLWRSAENGQI-CNDCH 209
K ++ CS C T + LWR + G + CN C+
Sbjct: 51 KIAKVIRDACCSHCSTTTTTLWRKNDEGNLECNACN 86
>AF068708-9|AAC17756.1| 198|Caenorhabditis elegans Erythroid-like
transcription factorfamily protein 7, isoform a protein.
Length = 198
Score = 31.1 bits (67), Expect = 0.72
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +3
Query: 105 KNTNIMPKPICSQCGTNDSMLWRSAENGQI-CNDCH 209
K ++ CS C T + LWR + G + CN C+
Sbjct: 133 KIAKVIRDACCSHCSTTTTTLWRKNDEGNLECNACN 168
>Z49867-3|CAA90029.2| 433|Caenorhabditis elegans Hypothetical
protein C33D3.1 protein.
Length = 433
Score = 30.7 bits (66), Expect = 0.95
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 132 ICSQCGTNDSMLWR-SAENGQICNDC 206
+CS C ++ LWR +AE +CN C
Sbjct: 236 VCSNCNGTNTTLWRRNAEGDPVCNAC 261
>U25175-1|AAC36130.1| 433|Caenorhabditis elegans GATA-factor
protein.
Length = 433
Score = 30.7 bits (66), Expect = 0.95
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 132 ICSQCGTNDSMLWR-SAENGQICNDC 206
+CS C ++ LWR +AE +CN C
Sbjct: 236 VCSNCNGTNTTLWRRNAEGDPVCNAC 261
>AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical
protein W09G12.7 protein.
Length = 368
Score = 30.7 bits (66), Expect = 0.95
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +3
Query: 126 KPICSQCGTNDSMLWRSAENGQICNDCHFSTVTPKESKLDSSIKTDCEDIKEDKDNGKNE 305
KP Q ++DS ++++ + +D S K+SK DSS +D D + D+GK +
Sbjct: 71 KPKKKQESSDDSS--DNSDSSESSDDDKKSKKKKKKSKKDSSDSSDSSDSSDSSDDGKKK 128
Query: 306 ESTPAK 323
+ +K
Sbjct: 129 KKKKSK 134
>Z50027-5|CAD44111.1| 72|Caenorhabditis elegans Hypothetical
protein C39B10.6 protein.
Length = 72
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +3
Query: 132 ICSQCGTNDSMLWR-SAENGQICNDC 206
+CS C ++ LWR AE +CN C
Sbjct: 15 VCSNCNGTNTTLWRRKAEGDPVCNAC 40
>Z81555-3|CAB04513.1| 221|Caenorhabditis elegans Hypothetical
protein F58E10.2 protein.
Length = 221
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = +3
Query: 96 LN*KNTNIMPKPICSQ--CGTNDSMLWRSAENGQI-CNDC 206
+N K + +CS C T ++ LWR ++G I CN C
Sbjct: 125 VNKKPSTFHTNSVCSNPNCRTRETTLWRRTDSGAIECNGC 164
>AF026555-1|AAB97516.1| 221|Caenorhabditis elegans GATA
transcription factor END-1 protein.
Length = 221
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = +3
Query: 96 LN*KNTNIMPKPICSQ--CGTNDSMLWRSAENGQI-CNDC 206
+N K + +CS C T ++ LWR ++G I CN C
Sbjct: 125 VNKKPSTFHTNSVCSNPNCRTRETTLWRRTDSGAIECNGC 164
>AC091267-2|AAK31564.2| 1133|Caenorhabditis elegans Hypothetical
protein Y37B11A.2 protein.
Length = 1133
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 138 SQCGTNDSMLWRSAENGQICNDCHFSTVTPKESKLDSSIKTDCEDIKEDKDNG-KNEES 311
S G +D+ +W + D TP+E + + D E+ ED DN KN+E+
Sbjct: 152 SSVGASDTTIWEQPGEDPMEEDRIGREKTPEELDAERQKEEDREEAAEDDDNDPKNQEA 210
>U70857-11|AAN84874.1| 295|Caenorhabditis elegans Hypothetical
protein C10G8.8b protein.
Length = 295
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 195 CNDCHFSTVTPKESKLDSSIKTDCEDIKEDKDNGKNEESTPAKAT 329
C D T TPK S+ +T E+ K DK+N +N + T +++
Sbjct: 224 CQDQRTETQTPKNSEPAQEEETRAEESK-DKENTENSDETKEESS 267
>U70857-10|AAB09175.1| 385|Caenorhabditis elegans Hypothetical
protein C10G8.8a protein.
Length = 385
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 195 CNDCHFSTVTPKESKLDSSIKTDCEDIKEDKDNGKNEESTPAKAT 329
C D T TPK S+ +T E+ K DK+N +N + T +++
Sbjct: 314 CQDQRTETQTPKNSEPAQEEETRAEESK-DKENTENSDETKEESS 357
>Z68221-5|CAJ30235.1| 416|Caenorhabditis elegans Hypothetical
protein W09C2.1b protein.
Length = 416
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = +3
Query: 135 CSQCGTNDSMLW-RSAENGQICNDC 206
C C TN + LW R+ E +CN C
Sbjct: 272 CVNCRTNTTTLWRRNGEGHPVCNAC 296
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +3
Query: 135 CSQCGTNDSMLWRSAENGQ-ICNDC 206
C CG +++ LWR +G +CN C
Sbjct: 217 CVNCGVHNTPLWRRDGSGNYLCNAC 241
>Z68221-4|CAJ30234.1| 488|Caenorhabditis elegans Hypothetical
protein W09C2.1a protein.
Length = 488
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = +3
Query: 135 CSQCGTNDSMLW-RSAENGQICNDC 206
C C TN + LW R+ E +CN C
Sbjct: 344 CVNCRTNTTTLWRRNGEGHPVCNAC 368
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +3
Query: 135 CSQCGTNDSMLWRSAENGQ-ICNDC 206
C CG +++ LWR +G +CN C
Sbjct: 289 CVNCGVHNTPLWRRDGSGNYLCNAC 313
>X57834-1|CAA40967.1| 416|Caenorhabditis elegans elt-1 protein.
Length = 416
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = +3
Query: 135 CSQCGTNDSMLW-RSAENGQICNDC 206
C C TN + LW R+ E +CN C
Sbjct: 272 CVNCRTNTTTLWRRNGEGHPVCNAC 296
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +3
Query: 135 CSQCGTNDSMLWRSAENGQ-ICNDC 206
C CG +++ LWR +G +CN C
Sbjct: 217 CVNCGVHNTPLWRRDGSGNYLCNAC 241
>AY462219-1|AAR26006.1| 358|Caenorhabditis elegans GATA
transcription factor EGL-18A protein.
Length = 358
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = +3
Query: 135 CSQCGTNDSMLW-RSAENGQICNDC 206
CS C T+ + W R AE +CN C
Sbjct: 266 CSNCRTDKTTAWRRDAEGKLVCNPC 290
>AF353302-1|AAK32716.1| 376|Caenorhabditis elegans GATA-like
transcription factorELT-5 protein.
Length = 376
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = +3
Query: 135 CSQCGTNDSMLW-RSAENGQICNDC 206
CS C T+ + W R AE +CN C
Sbjct: 266 CSNCRTDKTTAWRRDAEGKLVCNPC 290
>AF067612-7|AAD36952.2| 376|Caenorhabditis elegans Egg laying
defective protein 18 protein.
Length = 376
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = +3
Query: 135 CSQCGTNDSMLW-RSAENGQICNDC 206
CS C T+ + W R AE +CN C
Sbjct: 266 CSNCRTDKTTAWRRDAEGKLVCNPC 290
>Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical
protein F25D7.3 protein.
Length = 817
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 207 HFSTVTPKESKLDSSIKTDCEDIKEDKDNG 296
H+ T T KE + S++ D DIK + D G
Sbjct: 638 HWKTTTCKEEDMKDSMRDDLMDIKGEIDEG 667
>Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical
protein C25A1.10b protein.
Length = 696
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 225 PKESKLDSSIKTDCEDIKEDKDNGKNEESTPAKAT 329
P K D+S D + ED D+GK++++ P K T
Sbjct: 172 PMAKKQDTS---DSDSDSEDSDDGKSKKANPVKVT 203
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 225 PKESKLDSSIKTDCEDIKEDKDNGKNEESTPAKAT 329
P K D+S D + ED D+GK++++ P K T
Sbjct: 172 PMAKKQDTS---DSDSDSEDSDDGKSKKANPVKVT 203
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +3
Query: 228 KESKLDSSIKTDCEDIKEDKDNGKNEESTPAKAT 329
K K DSSI E + +D K E PAK T
Sbjct: 9187 KTEKADSSISETSETLTKDLTQTKQSEPEPAKRT 9220
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +3
Query: 228 KESKLDSSIKTDCEDIKEDKDNGKNEESTPAKAT 329
K K DSSI E + +D K E PAK T
Sbjct: 9207 KTEKADSSISETSETLTKDLTQTKQSEPEPAKRT 9240
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +3
Query: 228 KESKLDSSIKTDCEDIKEDKDNGKNEESTPAKAT 329
K K DSSI E + +D K E PAK T
Sbjct: 9207 KTEKADSSISETSETLTKDLTQTKQSEPEPAKRT 9240
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,560,492
Number of Sequences: 27780
Number of extensions: 267318
Number of successful extensions: 887
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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