Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12b19f
         (602 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0IFK2 Cluster: Map kinase-interacting serine/threonine...    56   6e-07
UniRef50_Q4SU46 Cluster: Chromosome undetermined SCAF14025, whol...    40   0.034
UniRef50_Q5TC08 Cluster: MAP kinase interacting serine/threonine...    38   0.24 
UniRef50_Q9BUB5 Cluster: MAP kinase-interacting serine/threonine...    38   0.24 
UniRef50_Q4QEP5 Cluster: Putative uncharacterized protein; n=2; ...    36   0.56 
UniRef50_A5AFB8 Cluster: Putative uncharacterized protein; n=1; ...    35   1.7  
UniRef50_Q2RLC6 Cluster: Transcriptional regulator, ArsR family;...    34   3.0  
UniRef50_Q27SZ8 Cluster: Mnk; n=1; Aplysia californica|Rep: Mnk ...    33   5.2  
UniRef50_A0LS28 Cluster: Putative uncharacterized protein; n=1; ...    33   6.9  
UniRef50_Q4QFW2 Cluster: Putative uncharacterized protein; n=3; ...    33   6.9  
UniRef50_UPI0000E8120C Cluster: PREDICTED: hypothetical protein;...    32   9.1  
UniRef50_Q4CLY3 Cluster: Putative uncharacterized protein; n=1; ...    32   9.1  
UniRef50_A5K650 Cluster: Putative uncharacterized protein; n=1; ...    32   9.1  
UniRef50_Q0W033 Cluster: Predicted glycerol-3-phosphate dehydrog...    32   9.1  

>UniRef50_Q0IFK2 Cluster: Map kinase-interacting serine/threonine
           kinase; n=1; Aedes aegypti|Rep: Map kinase-interacting
           serine/threonine kinase - Aedes aegypti (Yellowfever
           mosquito)
          Length = 849

 Score = 56.0 bits (129), Expect = 6e-07
 Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
 Frame = +2

Query: 326 VKKVSEESVDSGVGRCSSQSGSERESDETPRGAEQSAPVDIP-DSEDMQXXXXXXXXXXX 502
           ++++  +S ++ V R SS+  S  ES+E     E+    D     E+M+           
Sbjct: 43  LERICADSRNTEVARYSSEEISGNESNEARLMTEEERQADFNRHKEEMKRKRRRKKR--- 99

Query: 503 XXXXSGSSVVTSCFQDLYKLTGEVLGEGAYASV 601
               + SS+ +SCFQ+LYKLTGEVLGEGAYASV
Sbjct: 100 ----ASSSMQSSCFQELYKLTGEVLGEGAYASV 128


>UniRef50_Q4SU46 Cluster: Chromosome undetermined SCAF14025, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF14025,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 467

 Score = 40.3 bits (90), Expect = 0.034
 Identities = 27/59 (45%), Positives = 33/59 (55%)
 Frame = +2

Query: 425 EQSAPVDIPDSEDMQXXXXXXXXXXXXXXXSGSSVVTSCFQDLYKLTGEVLGEGAYASV 601
           E+S PV+IPD+   +               S SS  T  F+DLYKLT EVLG+GAYA V
Sbjct: 3   EKSQPVNIPDAIKKKKKKRIRA--------SDSS--TGTFEDLYKLTDEVLGQGAYAKV 51


>UniRef50_Q5TC08 Cluster: MAP kinase interacting serine/threonine
           kinase 1; n=9; Euteleostomi|Rep: MAP kinase interacting
           serine/threonine kinase 1 - Homo sapiens (Human)
          Length = 266

 Score = 37.5 bits (83), Expect = 0.24
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +2

Query: 542 FQDLYKLTGEVLGEGAYASV 601
           F+D+YKLT E+LGEGAYA V
Sbjct: 38  FEDMYKLTSELLGEGAYAKV 57


>UniRef50_Q9BUB5 Cluster: MAP kinase-interacting
           serine/threonine-protein kinase 1; n=5;
           Euteleostomi|Rep: MAP kinase-interacting
           serine/threonine-protein kinase 1 - Homo sapiens (Human)
          Length = 465

 Score = 37.5 bits (83), Expect = 0.24
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +2

Query: 542 FQDLYKLTGEVLGEGAYASV 601
           F+D+YKLT E+LGEGAYA V
Sbjct: 44  FEDMYKLTSELLGEGAYAKV 63


>UniRef50_Q4QEP5 Cluster: Putative uncharacterized protein; n=2;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 2202

 Score = 36.3 bits (80), Expect = 0.56
 Identities = 24/67 (35%), Positives = 29/67 (43%)
 Frame = +1

Query: 316 NQDGQEGIGRECR*RCGSL*QPVGE*TRVR*DSKGRRAVRAGRHPRQRGHAATQGRGAQE 495
           N    E +GRE R R G         T  R D++GR A RAG  PR   H+   G     
Sbjct: 614 NSFSSESVGRESRARLGKCAGEGATATAAREDARGRDAARAGEPPR-TDHSDEGGTAEPP 672

Query: 496 ASQEEAF 516
           AS+   F
Sbjct: 673 ASRSSPF 679


>UniRef50_A5AFB8 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 179

 Score = 34.7 bits (76), Expect = 1.7
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +2

Query: 101 TFRHNLRTSFSTVVLFSLISRIIFGVFFFPSSFNAVPIS 217
           T RH L     T+ L +L   ++F +FF  ++FNA+ IS
Sbjct: 41  TSRHKLLVLVGTITLLALTGLLVFMLFFLAATFNAIVIS 79


>UniRef50_Q2RLC6 Cluster: Transcriptional regulator, ArsR family;
           n=1; Moorella thermoacetica ATCC 39073|Rep:
           Transcriptional regulator, ArsR family - Moorella
           thermoacetica (strain ATCC 39073)
          Length = 111

 Score = 33.9 bits (74), Expect = 3.0
 Identities = 21/58 (36%), Positives = 33/58 (56%)
 Frame = -3

Query: 276 SRCTTLQKPLSNLWRSPYRREIGTALKDEGKKKTPKIIREINEKSTTVEKDVRKLCRK 103
           S CT + + L  L  +P R +I  AL+ EG+K   +I+RE  EK + V + ++ L  K
Sbjct: 5   SECTLVAEFLQGL-ANPVRVKILCALR-EGEKSVSEIVRETGEKQSNVSQQLQILLHK 60


>UniRef50_Q27SZ8 Cluster: Mnk; n=1; Aplysia californica|Rep: Mnk -
           Aplysia californica (California sea hare)
          Length = 528

 Score = 33.1 bits (72), Expect = 5.2
 Identities = 14/20 (70%), Positives = 16/20 (80%)
 Frame = +2

Query: 542 FQDLYKLTGEVLGEGAYASV 601
           F DLY+ TGE LG G+YASV
Sbjct: 68  FSDLYEETGEFLGNGSYASV 87


>UniRef50_A0LS28 Cluster: Putative uncharacterized protein; n=1;
           Acidothermus cellulolyticus 11B|Rep: Putative
           uncharacterized protein - Acidothermus cellulolyticus
           (strain ATCC 43068 / 11B)
          Length = 157

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +1

Query: 433 RAGRHPRQRGHAATQGRGAQEASQEEAFWKLRCYF 537
           RA R PR+  HA  Q RG    +  EA W  RC++
Sbjct: 71  RARRSPRRSRHAENQLRGPSSLACPEARWLSRCHY 105


>UniRef50_Q4QFW2 Cluster: Putative uncharacterized protein; n=3;
            Leishmania|Rep: Putative uncharacterized protein -
            Leishmania major
          Length = 1843

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +2

Query: 344  ESVDSGVGRCSSQSGSERESDETPRGAEQSAPVDIPDSEDM 466
            E+  SG GRC  +SG+ER      RG+E  AP  + D  D+
Sbjct: 1183 ENDPSGRGRCGDRSGTERRG----RGSESCAPAALGDGTDV 1219


>UniRef50_UPI0000E8120C Cluster: PREDICTED: hypothetical protein;
           n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
           - Gallus gallus
          Length = 151

 Score = 32.3 bits (70), Expect = 9.1
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +1

Query: 433 RAGRHPRQRGHAATQGRGAQEASQEEA 513
           RAGRHPR  G A   G G +E  Q  A
Sbjct: 46  RAGRHPRGHGRAGQGGAGREEGGQRAA 72


>UniRef50_Q4CLY3 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 201

 Score = 32.3 bits (70), Expect = 9.1
 Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = -3

Query: 462 SSLSGMST--GADCSAPLGVSSDSRSLPDWLLQR-PTPLSTLSS 340
           SS+SG S    A C AP      S  LP W L+R P+PL+T +S
Sbjct: 133 SSMSGRSRFFSASCGAPAVSLGKSTPLPSWHLKRIPSPLATDAS 176


>UniRef50_A5K650 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 1479

 Score = 32.3 bits (70), Expect = 9.1
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +2

Query: 374 SSQSGSERESDETPRGAEQSAPVDIP 451
           +S+  S RES E PRGA Q  PV  P
Sbjct: 660 TSEGDSRRESKENPRGAAQDEPVQAP 685


>UniRef50_Q0W033 Cluster: Predicted glycerol-3-phosphate
           dehydrogenase; n=1; uncultured methanogenic archaeon
           RC-I|Rep: Predicted glycerol-3-phosphate dehydrogenase -
           Uncultured methanogenic archaeon RC-I
          Length = 460

 Score = 32.3 bits (70), Expect = 9.1
 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
 Frame = -3

Query: 420 PLGVSSDSRSLP-DWLLQRPTPLSTLSSDTFLTI-LIA*YVDTAIM--IFKTSRCTTLQK 253
           PL  S D RSL  D+ +     L T++     T  L+A +   A+M  + KT RC+T+ +
Sbjct: 289 PLLGSGDGRSLSRDYKIFEDAGLITIAGGKLTTYRLVAEHASDAVMRMLGKTGRCSTMSE 348

Query: 252 PLSNLWR 232
           PL ++ R
Sbjct: 349 PLPDVRR 355


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,676,272
Number of Sequences: 1657284
Number of extensions: 9093889
Number of successful extensions: 31581
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 30546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31566
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42732687689
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)