BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12b19f
(602 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC002755-1|AAH02755.1| 465|Homo sapiens MAP kinase interacting ... 38 0.036
AY355461-1|AAQ84219.1| 347|Homo sapiens MNK1-like kinase 1b pro... 38 0.036
AL136373-6|CAI14765.1| 465|Homo sapiens MAP kinase interacting ... 38 0.036
AL136373-5|CAI14764.1| 424|Homo sapiens MAP kinase interacting ... 38 0.036
AL136373-4|CAI14763.1| 266|Homo sapiens MAP kinase interacting ... 38 0.036
AB000409-1|BAA19885.1| 424|Homo sapiens MNK1 protein. 38 0.036
BC073140-1|AAH73140.1| 414|Homo sapiens MAP kinase interacting ... 30 7.2
AK124035-1|BAC85757.1| 244|Homo sapiens protein ( Homo sapiens ... 30 7.2
AK022683-1|BAB14177.1| 545|Homo sapiens protein ( Homo sapiens ... 30 7.2
AK001360-1|BAA91648.1| 627|Homo sapiens protein ( Homo sapiens ... 30 7.2
AF237776-1|AAG26337.1| 414|Homo sapiens MAP kinase-interacting ... 30 7.2
AF237775-1|AAG26336.1| 465|Homo sapiens MAP kinase-interacting ... 30 7.2
AF125532-1|AAF17226.1| 414|Homo sapiens map kinase-interacting ... 30 7.2
AC007136-1|AAD21217.1| 472|Homo sapiens Putative map kinase int... 30 7.2
>BC002755-1|AAH02755.1| 465|Homo sapiens MAP kinase interacting
serine/threonine kinase 1 protein.
Length = 465
Score = 37.5 bits (83), Expect = 0.036
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +2
Query: 542 FQDLYKLTGEVLGEGAYASV 601
F+D+YKLT E+LGEGAYA V
Sbjct: 44 FEDMYKLTSELLGEGAYAKV 63
>AY355461-1|AAQ84219.1| 347|Homo sapiens MNK1-like kinase 1b
protein.
Length = 347
Score = 37.5 bits (83), Expect = 0.036
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +2
Query: 542 FQDLYKLTGEVLGEGAYASV 601
F+D+YKLT E+LGEGAYA V
Sbjct: 44 FEDMYKLTSELLGEGAYAKV 63
>AL136373-6|CAI14765.1| 465|Homo sapiens MAP kinase interacting
serine/threonine kinase 1 protein.
Length = 465
Score = 37.5 bits (83), Expect = 0.036
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +2
Query: 542 FQDLYKLTGEVLGEGAYASV 601
F+D+YKLT E+LGEGAYA V
Sbjct: 44 FEDMYKLTSELLGEGAYAKV 63
>AL136373-5|CAI14764.1| 424|Homo sapiens MAP kinase interacting
serine/threonine kinase 1 protein.
Length = 424
Score = 37.5 bits (83), Expect = 0.036
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +2
Query: 542 FQDLYKLTGEVLGEGAYASV 601
F+D+YKLT E+LGEGAYA V
Sbjct: 44 FEDMYKLTSELLGEGAYAKV 63
>AL136373-4|CAI14763.1| 266|Homo sapiens MAP kinase interacting
serine/threonine kinase 1 protein.
Length = 266
Score = 37.5 bits (83), Expect = 0.036
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +2
Query: 542 FQDLYKLTGEVLGEGAYASV 601
F+D+YKLT E+LGEGAYA V
Sbjct: 38 FEDMYKLTSELLGEGAYAKV 57
>AB000409-1|BAA19885.1| 424|Homo sapiens MNK1 protein.
Length = 424
Score = 37.5 bits (83), Expect = 0.036
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +2
Query: 542 FQDLYKLTGEVLGEGAYASV 601
F+D+YKLT E+LGEGAYA V
Sbjct: 44 FEDMYKLTSELLGEGAYAKV 63
>BC073140-1|AAH73140.1| 414|Homo sapiens MAP kinase interacting
serine/threonine kinase 2 protein.
Length = 414
Score = 29.9 bits (64), Expect = 7.2
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 542 FQDLYKLTGEVLGEGAYASV 601
F+D+Y+L +VLGEGA+A V
Sbjct: 79 FEDVYQLQEDVLGEGAHARV 98
>AK124035-1|BAC85757.1| 244|Homo sapiens protein ( Homo sapiens
cDNA FLJ42041 fis, clone SPLEN2040222. ).
Length = 244
Score = 29.9 bits (64), Expect = 7.2
Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = -3
Query: 426 SAPLGVSSDSRSLPDWLLQRPT---PLSTLS 343
SA L +SS S +LP WLL +PT PL TL+
Sbjct: 9 SALLNLSSLSLTLPQWLLYQPTKKAPLPTLA 39
>AK022683-1|BAB14177.1| 545|Homo sapiens protein ( Homo sapiens
cDNA FLJ12621 fis, clone NT2RM4001715. ).
Length = 545
Score = 29.9 bits (64), Expect = 7.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 290 IIAVSTYQAIKMVKKVSEESVDSGVGRCSSQSGSERESDETPRG 421
++ +Q I+M + E +D+ G+C + E +SDE PRG
Sbjct: 453 VLTQEDFQKIRMAQMRKE--LDAAPGKCQKRKYIEIDSDEEPRG 494
>AK001360-1|BAA91648.1| 627|Homo sapiens protein ( Homo sapiens
cDNA FLJ10498 fis, clone NT2RP2000328. ).
Length = 627
Score = 29.9 bits (64), Expect = 7.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 290 IIAVSTYQAIKMVKKVSEESVDSGVGRCSSQSGSERESDETPRG 421
++ +Q I+M + E +D+ G+C + E +SDE PRG
Sbjct: 490 VLTQEDFQKIRMAQMRKE--LDAAPGKCQKRKYIEIDSDEEPRG 531
>AF237776-1|AAG26337.1| 414|Homo sapiens MAP kinase-interacting
kinase 2b protein.
Length = 414
Score = 29.9 bits (64), Expect = 7.2
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 542 FQDLYKLTGEVLGEGAYASV 601
F+D+Y+L +VLGEGA+A V
Sbjct: 79 FEDVYQLQEDVLGEGAHARV 98
>AF237775-1|AAG26336.1| 465|Homo sapiens MAP kinase-interacting
kinase 2a protein.
Length = 465
Score = 29.9 bits (64), Expect = 7.2
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 542 FQDLYKLTGEVLGEGAYASV 601
F+D+Y+L +VLGEGA+A V
Sbjct: 79 FEDVYQLQEDVLGEGAHARV 98
>AF125532-1|AAF17226.1| 414|Homo sapiens map kinase-interacting
kinase protein.
Length = 414
Score = 29.9 bits (64), Expect = 7.2
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 542 FQDLYKLTGEVLGEGAYASV 601
F+D+Y+L +VLGEGA+A V
Sbjct: 79 FEDVYQLQEDVLGEGAHARV 98
>AC007136-1|AAD21217.1| 472|Homo sapiens Putative map kinase
interacting kinase [Homo sapiens] protein.
Length = 472
Score = 29.9 bits (64), Expect = 7.2
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 542 FQDLYKLTGEVLGEGAYASV 601
F+D+Y+L +VLGEGA+A V
Sbjct: 86 FEDVYQLQEDVLGEGAHARV 105
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,063,319
Number of Sequences: 237096
Number of extensions: 1376327
Number of successful extensions: 3836
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3836
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -