SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12b19f
         (602 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC002755-1|AAH02755.1|  465|Homo sapiens MAP kinase interacting ...    38   0.036
AY355461-1|AAQ84219.1|  347|Homo sapiens MNK1-like kinase 1b pro...    38   0.036
AL136373-6|CAI14765.1|  465|Homo sapiens MAP kinase interacting ...    38   0.036
AL136373-5|CAI14764.1|  424|Homo sapiens MAP kinase interacting ...    38   0.036
AL136373-4|CAI14763.1|  266|Homo sapiens MAP kinase interacting ...    38   0.036
AB000409-1|BAA19885.1|  424|Homo sapiens MNK1 protein.                 38   0.036
BC073140-1|AAH73140.1|  414|Homo sapiens MAP kinase interacting ...    30   7.2  
AK124035-1|BAC85757.1|  244|Homo sapiens protein ( Homo sapiens ...    30   7.2  
AK022683-1|BAB14177.1|  545|Homo sapiens protein ( Homo sapiens ...    30   7.2  
AK001360-1|BAA91648.1|  627|Homo sapiens protein ( Homo sapiens ...    30   7.2  
AF237776-1|AAG26337.1|  414|Homo sapiens MAP kinase-interacting ...    30   7.2  
AF237775-1|AAG26336.1|  465|Homo sapiens MAP kinase-interacting ...    30   7.2  
AF125532-1|AAF17226.1|  414|Homo sapiens map kinase-interacting ...    30   7.2  
AC007136-1|AAD21217.1|  472|Homo sapiens Putative map kinase int...    30   7.2  

>BC002755-1|AAH02755.1|  465|Homo sapiens MAP kinase interacting
           serine/threonine kinase 1 protein.
          Length = 465

 Score = 37.5 bits (83), Expect = 0.036
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +2

Query: 542 FQDLYKLTGEVLGEGAYASV 601
           F+D+YKLT E+LGEGAYA V
Sbjct: 44  FEDMYKLTSELLGEGAYAKV 63


>AY355461-1|AAQ84219.1|  347|Homo sapiens MNK1-like kinase 1b
           protein.
          Length = 347

 Score = 37.5 bits (83), Expect = 0.036
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +2

Query: 542 FQDLYKLTGEVLGEGAYASV 601
           F+D+YKLT E+LGEGAYA V
Sbjct: 44  FEDMYKLTSELLGEGAYAKV 63


>AL136373-6|CAI14765.1|  465|Homo sapiens MAP kinase interacting
           serine/threonine kinase 1 protein.
          Length = 465

 Score = 37.5 bits (83), Expect = 0.036
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +2

Query: 542 FQDLYKLTGEVLGEGAYASV 601
           F+D+YKLT E+LGEGAYA V
Sbjct: 44  FEDMYKLTSELLGEGAYAKV 63


>AL136373-5|CAI14764.1|  424|Homo sapiens MAP kinase interacting
           serine/threonine kinase 1 protein.
          Length = 424

 Score = 37.5 bits (83), Expect = 0.036
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +2

Query: 542 FQDLYKLTGEVLGEGAYASV 601
           F+D+YKLT E+LGEGAYA V
Sbjct: 44  FEDMYKLTSELLGEGAYAKV 63


>AL136373-4|CAI14763.1|  266|Homo sapiens MAP kinase interacting
           serine/threonine kinase 1 protein.
          Length = 266

 Score = 37.5 bits (83), Expect = 0.036
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +2

Query: 542 FQDLYKLTGEVLGEGAYASV 601
           F+D+YKLT E+LGEGAYA V
Sbjct: 38  FEDMYKLTSELLGEGAYAKV 57


>AB000409-1|BAA19885.1|  424|Homo sapiens MNK1 protein.
          Length = 424

 Score = 37.5 bits (83), Expect = 0.036
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +2

Query: 542 FQDLYKLTGEVLGEGAYASV 601
           F+D+YKLT E+LGEGAYA V
Sbjct: 44  FEDMYKLTSELLGEGAYAKV 63


>BC073140-1|AAH73140.1|  414|Homo sapiens MAP kinase interacting
           serine/threonine kinase 2 protein.
          Length = 414

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = +2

Query: 542 FQDLYKLTGEVLGEGAYASV 601
           F+D+Y+L  +VLGEGA+A V
Sbjct: 79  FEDVYQLQEDVLGEGAHARV 98


>AK124035-1|BAC85757.1|  244|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42041 fis, clone SPLEN2040222. ).
          Length = 244

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
 Frame = -3

Query: 426 SAPLGVSSDSRSLPDWLLQRPT---PLSTLS 343
           SA L +SS S +LP WLL +PT   PL TL+
Sbjct: 9   SALLNLSSLSLTLPQWLLYQPTKKAPLPTLA 39


>AK022683-1|BAB14177.1|  545|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12621 fis, clone NT2RM4001715. ).
          Length = 545

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +2

Query: 290 IIAVSTYQAIKMVKKVSEESVDSGVGRCSSQSGSERESDETPRG 421
           ++    +Q I+M +   E  +D+  G+C  +   E +SDE PRG
Sbjct: 453 VLTQEDFQKIRMAQMRKE--LDAAPGKCQKRKYIEIDSDEEPRG 494


>AK001360-1|BAA91648.1|  627|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10498 fis, clone NT2RP2000328. ).
          Length = 627

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +2

Query: 290 IIAVSTYQAIKMVKKVSEESVDSGVGRCSSQSGSERESDETPRG 421
           ++    +Q I+M +   E  +D+  G+C  +   E +SDE PRG
Sbjct: 490 VLTQEDFQKIRMAQMRKE--LDAAPGKCQKRKYIEIDSDEEPRG 531


>AF237776-1|AAG26337.1|  414|Homo sapiens MAP kinase-interacting
           kinase 2b protein.
          Length = 414

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = +2

Query: 542 FQDLYKLTGEVLGEGAYASV 601
           F+D+Y+L  +VLGEGA+A V
Sbjct: 79  FEDVYQLQEDVLGEGAHARV 98


>AF237775-1|AAG26336.1|  465|Homo sapiens MAP kinase-interacting
           kinase 2a protein.
          Length = 465

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = +2

Query: 542 FQDLYKLTGEVLGEGAYASV 601
           F+D+Y+L  +VLGEGA+A V
Sbjct: 79  FEDVYQLQEDVLGEGAHARV 98


>AF125532-1|AAF17226.1|  414|Homo sapiens map kinase-interacting
           kinase protein.
          Length = 414

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = +2

Query: 542 FQDLYKLTGEVLGEGAYASV 601
           F+D+Y+L  +VLGEGA+A V
Sbjct: 79  FEDVYQLQEDVLGEGAHARV 98


>AC007136-1|AAD21217.1|  472|Homo sapiens Putative map kinase
           interacting kinase [Homo sapiens] protein.
          Length = 472

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = +2

Query: 542 FQDLYKLTGEVLGEGAYASV 601
           F+D+Y+L  +VLGEGA+A V
Sbjct: 86  FEDVYQLQEDVLGEGAHARV 105


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,063,319
Number of Sequences: 237096
Number of extensions: 1376327
Number of successful extensions: 3836
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3836
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -