Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12b17f
(630 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0782 - 27658855-27659211,27660417-27660540,27660714-27660871 151 6e-37
09_04_0656 + 19267392-19267432,19267530-19267637,19269114-192691... 55 4e-08
06_01_0285 - 2090427-2090558,2091045-2091119,2091334-2091407,209... 55 5e-08
02_05_0884 - 32483735-32483866,32484417-32484491,32484707-324847... 54 1e-07
05_01_0588 + 5278013-5278153,5278641-5278782,5278923-5279019,527... 52 5e-07
09_04_0728 - 19771975-19772093,19772131-19772224,19772322-197725... 50 1e-06
06_03_0903 - 25816395-25816493,25816695-25816779,25817390-258174... 49 3e-06
02_01_0614 - 4599035-4599083,4599209-4599303,4599410-4599494,460... 47 1e-05
05_05_0306 - 23977543-23977614,23977709-23977799,23978296-239783... 44 8e-05
08_02_1353 + 26335306-26335448,26336025-26336106,26336322-263364... 44 1e-04
06_01_0539 + 3869156-3869908 43 2e-04
06_01_0529 + 3831100-3831852 43 2e-04
06_01_0479 + 3419657-3420337 43 2e-04
11_06_0394 - 23084485-23084577,23084677-23084802,23085134-230852... 38 0.005
01_06_1091 + 34464923-34465026,34465124-34465163,34465245-344653... 36 0.027
07_03_1256 - 25237465-25237590,25237833-25237918,25238025-252380... 35 0.061
06_03_0501 + 21476715-21476785,21477045-21477786,21478097-214782... 29 4.0
11_06_0700 - 26404490-26404747,26405081-26405154,26405420-264054... 28 5.3
11_06_0178 + 20942757-20942801,20943790-20943867,20943930-209440... 28 5.3
05_01_0502 + 4191443-4191769,4191770-4191892,4194161-4194313,419... 28 7.0
03_05_0376 - 23598026-23598136,23598395-23598484,23598870-235989... 27 9.3
>03_05_0782 - 27658855-27659211,27660417-27660540,27660714-27660871
Length = 212
Score = 151 bits (365), Expect = 6e-37
Identities = 69/162 (42%), Positives = 104/162 (64%)
Frame = +1
Query: 145 LQCLLGIQCNDFVMIAADQSNSHSIMIMKDDEEKIYKISDRLVMGVIGDSGDTNQFAEYI 324
++C++G+ DF ++AAD S SI++ K DE+K+ + +MG G+ GD QF E+I
Sbjct: 1 MECVIGVVGRDFAVVAADTSAVQSILVHKTDEDKVMVLDSHKLMGASGEPGDRVQFTEFI 60
Query: 325 AKNIQLYKMRNGYELGPSAAASFTRRNLAEYLRSSTPYFVNVLMGGYDKENGPELYFMDY 504
KN+ LY+ RN L +A A+FTR LA LR + PY+VNVL+ GYD + G LY++DY
Sbjct: 61 QKNLHLYQFRNNIPLSTAATANFTRGELATALRKN-PYYVNVLLAGYDSDVGASLYYIDY 119
Query: 505 LASSVKVPFAAHGYGGYLSLSIMDRYHKKDATETEAYDILKK 630
+A+ K+ A GYG Y LS+MD+ ++ D + EA D++ K
Sbjct: 120 IATFHKIEKGAFGYGSYFCLSLMDKLYRPDMSVEEAVDLVDK 161
>09_04_0656 +
19267392-19267432,19267530-19267637,19269114-19269195,
19269637-19269766,19269882-19270024,19270198-19270284,
19270384-19270458
Length = 221
Score = 55.2 bits (127), Expect = 4e-08
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 13/164 (7%)
Frame = +1
Query: 175 DFVMIAADQSNSHSIMIMKDDEEKIYKISDRLVMGVIGDSGDTNQFAEYIAKNIQLYKMR 354
D+ ++AAD S I+ D KI +++D+ + G GD + +A LY+ +
Sbjct: 23 DYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKALHKNLAARELLYQHQ 82
Query: 355 NGYELGPSAAASFTRRNLAEYLRSSTPYFVNVLMGGYDKENGPELYFMDYLASSVKVPFA 534
+ + A A L Y + PY+ ++GG D E ++ D + S + ++
Sbjct: 83 HNKRMSCPAMAQLLSNTL--YYKRFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERTGYS 140
Query: 535 AHGYGGYLSLSIMDRYHK---------KDA----TETEAYDILK 627
A G G L + ++D K +DA +ETEA D++K
Sbjct: 141 AQGTGSALIMPVLDNQLKSPSPLLLPARDAVTPLSETEAVDLVK 184
>06_01_0285 -
2090427-2090558,2091045-2091119,2091334-2091407,
2091792-2091903,2092036-2092108,2092291-2092346,
2092679-2092755,2093384-2093525
Length = 246
Score = 54.8 bits (126), Expect = 5e-08
Identities = 35/159 (22%), Positives = 76/159 (47%)
Frame = +1
Query: 154 LLGIQCNDFVMIAADQSNSHSIMIMKDDEEKIYKISDRLVMGVIGDSGDTNQFAEYIAKN 333
++G+ + V++AAD S + + +KI +++D + + G + DT +EY+
Sbjct: 28 IVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADTQVISEYVRYF 87
Query: 334 IQLYKMRNGYELGPSAAASFTRRNLAEYLRSSTPYFVNVLMGGYDKENGPELYFMDYLAS 513
+ + ++ G AA+ R L Y ++ +++GG+DK G +++ + +
Sbjct: 88 LHQHTIQLGQPATVKVAANLIR--LLAY-QNKNMLQAGMIVGGWDKYEGGQIFSVPLGGT 144
Query: 514 SVKVPFAAHGYGGYLSLSIMDRYHKKDATETEAYDILKK 630
++ PFA G G ++D K+ ++ EA + K
Sbjct: 145 ILRQPFAIGGSGSSYLYGLLDHEWKEGMSQEEAEKFVVK 183
>02_05_0884 -
32483735-32483866,32484417-32484491,32484707-32484780,
32485180-32485291,32485476-32485548,32485674-32485729,
32486046-32486122,32486799-32486940
Length = 246
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/159 (21%), Positives = 76/159 (47%)
Frame = +1
Query: 154 LLGIQCNDFVMIAADQSNSHSIMIMKDDEEKIYKISDRLVMGVIGDSGDTNQFAEYIAKN 333
++G+ + V++AAD S + + +KI +++D + + G + DT ++Y+
Sbjct: 28 IVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYICRSGSAADTQVISDYVRYF 87
Query: 334 IQLYKMRNGYELGPSAAASFTRRNLAEYLRSSTPYFVNVLMGGYDKENGPELYFMDYLAS 513
+ + ++ G AA+ R L Y ++ +++GG+DK G +++ + +
Sbjct: 88 LHQHTIQLGQPATVKVAANLIR--LLAY-QNKNMLQAGMIVGGWDKYEGGQIFSVPLGGT 144
Query: 514 SVKVPFAAHGYGGYLSLSIMDRYHKKDATETEAYDILKK 630
++ PFA G G ++D K+ ++ EA + K
Sbjct: 145 ILRQPFAIGGSGSSYLYGLLDHEWKEGMSQEEAEKFVVK 183
>05_01_0588 +
5278013-5278153,5278641-5278782,5278923-5279019,
5279130-5279199,5279284-5279388,5279531-5279629,
5280062-5280152,5280238-5280311
Length = 272
Score = 51.6 bits (118), Expect = 5e-07
Identities = 34/157 (21%), Positives = 72/157 (45%)
Frame = +1
Query: 154 LLGIQCNDFVMIAADQSNSHSIMIMKDDEEKIYKISDRLVMGVIGDSGDTNQFAEYIAKN 333
++G+ D V++ AD + ++ + EKI+ ++ + G + DT + ++
Sbjct: 41 IVGLVFQDGVVLGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQ 100
Query: 334 IQLYKMRNGYELGPSAAASFTRRNLAEYLRSSTPYFVNVLMGGYDKENGPELYFMDYLAS 513
+QL++ G E + + + +L Y + V +GG D GP L+ + S
Sbjct: 101 LQLHRYATGRESRVVTSLTLLKSHLFSYQGHVSAALV---LGGVDV-TGPHLHTVYPHGS 156
Query: 514 SVKVPFAAHGYGGYLSLSIMDRYHKKDATETEAYDIL 624
+ +PFA G G ++S+ + +K+ T E ++
Sbjct: 157 TDTLPFATMGSGSLAAMSVFESKYKEGLTREEGIQLV 193
>09_04_0728 -
19771975-19772093,19772131-19772224,19772322-19772507,
19772596-19772767,19772854-19772983,19773060-19773136,
19774109-19774194,19774508-19774585,19775916-19776045,
19776379-19776423,19776508-19776618,19776801-19777057,
19777153-19777302,19777899-19778008,19778426-19778546
Length = 621
Score = 50.4 bits (115), Expect = 1e-06
Identities = 33/163 (20%), Positives = 76/163 (46%), Gaps = 4/163 (2%)
Frame = +1
Query: 154 LLGIQCNDFVMIAADQSNSHSIMIMKDDEEKIYKISDRLVMGVIGDSGDTNQFAEYIAK- 330
++ ++ D V++A+D S+ + E+I + ++G G+ D + Y+ +
Sbjct: 372 IIALKYKDGVIMASDTGASYGSTLRYKSVERIKAVGKHSLIGASGEFSDFQEILRYLDEL 431
Query: 331 NIQLYKMRNGYELGPSAAASFTRRNLAEYLRSSTPYFVNVLMGGYDK-ENGPELY--FMD 501
+ + +G LGP S+ R + P + ++++GG K G E Y ++
Sbjct: 432 TLSDHMWDDGNSLGPKEVHSYLTRVMYNRRNKFDPLWNSLVIGGVKKGPKGEEKYLGMVN 491
Query: 502 YLASSVKVPFAAHGYGGYLSLSIMDRYHKKDATETEAYDILKK 630
+ + + A G+G ++++ I+ ++D T EA +++K
Sbjct: 492 MIGTHFEENHIATGFGNHMAIPILRTEWREDMTFEEAVKLVEK 534
>06_03_0903 -
25816395-25816493,25816695-25816779,25817390-25817479,
25818566-25818673,25818771-25818952,25819032-25819216,
25820812-25820971
Length = 302
Score = 49.2 bits (112), Expect = 3e-06
Identities = 32/149 (21%), Positives = 66/149 (44%), Gaps = 1/149 (0%)
Frame = +1
Query: 187 IAADQSNSHSIMIMKDDEEKIYKISDRLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNGYE 366
IA+D+ + + D ++++KI D+L +G+ G + D + + +LY++R +
Sbjct: 135 IASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDAQTLYQRLVFRHKLYQLREERD 194
Query: 367 LGPSAAASFTRRNLAEYLRSSTPYFVNVLMGGYDKENGPELYFMDYL-ASSVKVPFAAHG 543
+ P AS L Y + PYF ++ G ++N P + MD + A + F G
Sbjct: 195 MKPQTFASLVSALL--YEKRFGPYFCQPVIAGLGEDNEPFICTMDCIGAKELAKDFVVSG 252
Query: 544 YGGYLSLSIMDRYHKKDATETEAYDILKK 630
+ +K + E ++ + +
Sbjct: 253 TASESLYGACESMYKPNMEPEELFETISQ 281
>02_01_0614 -
4599035-4599083,4599209-4599303,4599410-4599494,
4600107-4600196,4600772-4600879,4600983-4601197
Length = 213
Score = 46.8 bits (106), Expect = 1e-05
Identities = 32/149 (21%), Positives = 64/149 (42%), Gaps = 1/149 (0%)
Frame = +1
Query: 187 IAADQSNSHSIMIMKDDEEKIYKISDRLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNGYE 366
IA+D+ + + D ++++KI D+L +G+ G + D + + +LY++R +
Sbjct: 31 IASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDAQTLYQRLVFRHKLYQLREERD 90
Query: 367 LGPSAAASFTRRNLAEYLRSSTPYFVNVLMGGYDKENGPELYFMDYL-ASSVKVPFAAHG 543
+ P A AS L Y + PYF ++ G + P + MD + A + F G
Sbjct: 91 MKPQAFASLVSALL--YEKRFGPYFCQPVIAGLGDNDEPFICTMDCIGAKELAKDFVVSG 148
Query: 544 YGGYLSLSIMDRYHKKDATETEAYDILKK 630
+ +K E ++ + +
Sbjct: 149 TASESLYGACESMYKPSMEPEELFETISQ 177
>05_05_0306 -
23977543-23977614,23977709-23977799,23978296-23978361,
23978399-23978479,23979130-23979176,23979408-23979492,
23979570-23979656,23979728-23979801,23980083-23980166,
23980259-23980298,23980386-23980489
Length = 276
Score = 44.4 bits (100), Expect = 8e-05
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 5/161 (3%)
Frame = +1
Query: 142 NLQCLLGIQCNDFVMIAADQSNSHSIMIMKDDEEKIYKISDRLVMGVIGDSGDTNQFAEY 321
N ++GI+C D +++ ++ + S MI+K +++ + + V G + D Q
Sbjct: 33 NSGTVVGIKCKDGIVLGVEKLVT-SKMILKGSNRRLHSVHRHSGLAVAGLAADGRQIVSR 91
Query: 322 IAKNIQLYKMRNGY-----ELGPSAAASFTRRNLAEYLRSSTPYFVNVLMGGYDKENGPE 486
Y+ G EL A+ L +LR P+ V++GGYD++ GP+
Sbjct: 92 AKSEAASYEKVYGEPMPVKELADRVASYVHLCTLYWWLR---PFGCGVILGGYDRD-GPQ 147
Query: 487 LYFMDYLASSVKVPFAAHGYGGYLSLSIMDRYHKKDATETE 609
LY ++ S K AA G G + + + +KD + E
Sbjct: 148 LYMIEPSGLSYKYFGAALGKGRQAAKTCVYDGSRKDDSAFE 188
>08_02_1353 +
26335306-26335448,26336025-26336106,26336322-26336451,
26336486-26336548,26336549-26336691,26336827-26336913,
26337014-26337088
Length = 240
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/106 (25%), Positives = 44/106 (41%)
Frame = +1
Query: 175 DFVMIAADQSNSHSIMIMKDDEEKIYKISDRLVMGVIGDSGDTNQFAEYIAKNIQLYKMR 354
D+ ++AAD S I+ D KI ++D+ V+ G GD + LY+
Sbjct: 21 DYCVVAADTRLSVGYSILSRDSSKIAHLADKCVLASSGFQGDVKALQRNLTAKELLYEHN 80
Query: 355 NGYELGPSAAASFTRRNLAEYLRSSTPYFVNVLMGGYDKENGPELY 492
+ ++ A A L Y + PY+ ++GG D E Y
Sbjct: 81 HNKKMSCPAMAQLLSNTL--YYKRFFPYYAFNVLGGLDSEVAAHQY 124
>06_01_0539 + 3869156-3869908
Length = 250
Score = 42.7 bits (96), Expect = 2e-04
Identities = 36/166 (21%), Positives = 65/166 (39%), Gaps = 3/166 (1%)
Frame = +1
Query: 142 NLQCLLGIQCNDFVMIAADQSNSHSIMIMKDDEEKIYKISDRLVMGVIGDSGDTNQFAEY 321
N LG+ D V++ ++ + ++ EK+YKI L V G D N
Sbjct: 30 NAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNT 89
Query: 322 IAKNIQLYKMRNGYELGPSAAASF---TRRNLAEYLRSSTPYFVNVLMGGYDKENGPELY 492
+ Q Y + + T++ ++ P+ V+ L G+DK +G +LY
Sbjct: 90 ARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQF-GGLRPFGVSFLFAGWDKHHGFQLY 148
Query: 493 FMDYLASSVKVPFAAHGYGGYLSLSIMDRYHKKDATETEAYDILKK 630
D + AA G + S++ + ++ T EA + K
Sbjct: 149 MSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGMTREEAVALALK 194
>06_01_0529 + 3831100-3831852
Length = 250
Score = 42.7 bits (96), Expect = 2e-04
Identities = 36/166 (21%), Positives = 65/166 (39%), Gaps = 3/166 (1%)
Frame = +1
Query: 142 NLQCLLGIQCNDFVMIAADQSNSHSIMIMKDDEEKIYKISDRLVMGVIGDSGDTNQFAEY 321
N LG+ D V++ ++ + ++ EK+YKI L V G D N
Sbjct: 30 NAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNT 89
Query: 322 IAKNIQLYKMRNGYELGPSAAASF---TRRNLAEYLRSSTPYFVNVLMGGYDKENGPELY 492
+ Q Y + + T++ ++ P+ V+ L G+DK +G +LY
Sbjct: 90 ARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQF-GGLRPFGVSFLFAGWDKHHGFQLY 148
Query: 493 FMDYLASSVKVPFAAHGYGGYLSLSIMDRYHKKDATETEAYDILKK 630
D + AA G + S++ + ++ T EA + K
Sbjct: 149 MSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGMTREEAVALALK 194
>06_01_0479 + 3419657-3420337
Length = 226
Score = 42.7 bits (96), Expect = 2e-04
Identities = 36/166 (21%), Positives = 65/166 (39%), Gaps = 3/166 (1%)
Frame = +1
Query: 142 NLQCLLGIQCNDFVMIAADQSNSHSIMIMKDDEEKIYKISDRLVMGVIGDSGDTNQFAEY 321
N LG+ D V++ ++ + ++ EK+YKI L V G D N
Sbjct: 6 NAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNT 65
Query: 322 IAKNIQLYKMRNGYELGPSAAASF---TRRNLAEYLRSSTPYFVNVLMGGYDKENGPELY 492
+ Q Y + + T++ ++ P+ V+ L G+DK +G +LY
Sbjct: 66 ARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQF-GGLRPFGVSFLFAGWDKHHGFQLY 124
Query: 493 FMDYLASSVKVPFAAHGYGGYLSLSIMDRYHKKDATETEAYDILKK 630
D + AA G + S++ + ++ T EA + K
Sbjct: 125 MSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGLTREEAVALALK 170
>11_06_0394 -
23084485-23084577,23084677-23084802,23085134-23085236,
23085895-23085953,23086418-23086519,23086601-23086714,
23087666-23087746,23088073-23088154,23088504-23088556
Length = 270
Score = 38.3 bits (85), Expect = 0.005
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 6/150 (4%)
Frame = +1
Query: 157 LGIQCNDFVMIAADQSNSHSIMIMKDDEEKIYKISDRLVMGVIGDSGDTNQFAEYIAKNI 336
+G++ D V++A ++ + S ++ EKI +I + + + G D E+
Sbjct: 51 IGLKTKDGVVLAVEKRVT-SPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVET 109
Query: 337 QLYKMRNG----YELGPSAAASFTRR-NLAEYLRSSTPYFVNVLMGGYDKENGPELYFMD 501
Q ++ G E A R + S P+ V++L+ G+D ENGP LY+ D
Sbjct: 110 QNHRFSYGEPMTVESTTQAICDLALRFGEGDEESMSRPFGVSLLIAGHD-ENGPSLYYTD 168
Query: 502 YLASSVKVPFAAHGYGGY-LSLSIMDRYHK 588
+ + A G G S+ ++Y+K
Sbjct: 169 PSGTFWQCNAKAIGSGSEGADSSLQEQYNK 198
>01_06_1091 +
34464923-34465026,34465124-34465163,34465245-34465328,
34465457-34465480,34465582-34465655,34465726-34465812,
34465922-34466006,34466215-34466261,34467048-34467113,
34468307-34468397,34468477-34468548
Length = 257
Score = 35.9 bits (79), Expect = 0.027
Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 14/150 (9%)
Frame = +1
Query: 142 NLQCLLGIQCNDFVMIAADQSNSHSIMIMKDDEEKIYKIS-----DRL---VMGVIGDSG 297
N ++GI+C D +++ ++ + S M+++ +I+ + D + VM V G +
Sbjct: 33 NSGTVVGIKCKDGIVLGVEKLVT-SKMMLEGSNRRIHSVHWHSGLDIILINVMAVAGLAA 91
Query: 298 DTNQFAEYIAKNIQLYKMRNGYELGPSAAASFTRRNLAEYLRSST------PYFVNVLMG 459
D Q Y+ G + A +A Y+ T P+ V++G
Sbjct: 92 DGRQIVSRAKSEAASYEKVYGEPISVKELAD----RVASYVHLCTLYWWLRPFGCGVILG 147
Query: 460 GYDKENGPELYFMDYLASSVKVPFAAHGYG 549
GYD++ GP+LY ++ S K AA G G
Sbjct: 148 GYDRD-GPQLYMIEPSGVSYKYFGAALGKG 176
>07_03_1256 -
25237465-25237590,25237833-25237918,25238025-25238083,
25238516-25238612,25239582-25239663,25239752-25240096
Length = 264
Score = 34.7 bits (76), Expect = 0.061
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = +1
Query: 247 IYKISDRLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNGYELGPSAAASF--TRRNLAEYL 420
++ I+DR+ + G GD A+ ++ + GY++ P A + R +
Sbjct: 127 LFAITDRIGLLATGMPGDGRAIAQEARNAAAEFRFKWGYKMSPCMLAQWIADRAQIRTQH 186
Query: 421 RSSTPYFVNVLMGGYDKENG-PELYFMD 501
PY V ++ G D+E G PEL+ D
Sbjct: 187 AQIRPYGVVSMIFGIDEEKGTPELFTCD 214
>06_03_0501 +
21476715-21476785,21477045-21477786,21478097-21478246,
21478350-21478589,21479968-21480048,21480144-21480185,
21480953-21481033,21481271-21481368,21482574-21482667,
21482733-21482861,21483881-21483931,21484023-21484049,
21484280-21484387,21484956-21485201
Length = 719
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 370 GPSAAASFTRRNLAEYLRSSTPYFVNVL 453
GPSA SF R + EYL SS +V+ L
Sbjct: 456 GPSAVTSFVRLSAMEYLSSSGKLYVSRL 483
>11_06_0700 -
26404490-26404747,26405081-26405154,26405420-26405476,
26406072-26406135
Length = 150
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 226 MKDDEEKIYKISDRLVMGVIGDSGDTNQF 312
+K D+E+I+ IS L G+ D D NQF
Sbjct: 90 IKGDKEQIFVISKSLENGITPDHPDPNQF 118
>11_06_0178 +
20942757-20942801,20943790-20943867,20943930-20944025,
20944114-20944221,20944322-20944420
Length = 141
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 84 KRLFAVKAN*VIRLQNVKYKLTMSLRNT 167
KR+ KAN +IR N K+KL M R T
Sbjct: 9 KRVEKAKANIIIRKMNSKFKLRMFCRTT 36
>05_01_0502 +
4191443-4191769,4191770-4191892,4194161-4194313,
4194420-4194505,4194648-4194732,4194871-4194990,
4195066-4195134,4195351-4195506
Length = 372
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -1
Query: 339 LNIFCNIFSKLICVS*VTNDTHY*SIRYLIDLFFIVFHDHNAVAVALIG 193
LNI+ NIF+KL+C + + L+D+FF V + A V + G
Sbjct: 61 LNIYFNIFNKLVCT--YIFFPQFVNFLLLLDMFFFVSNLFMADLVGIHG 107
>03_05_0376 -
23598026-23598136,23598395-23598484,23598870-23598935,
23599743-23599811,23599890-23599998,23600135-23600232,
23600339-23600420,23601163-23601242,23601346-23601516,
23601671-23601735,23601842-23601986,23602072-23602245,
23602498-23602572,23602831-23602959,23603295-23603432,
23603509-23603610,23604008-23604112,23604282-23604399,
23605752-23605909,23606159-23606261,23606515-23606582,
23606940-23607016,23608635-23608806
Length = 834
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 229 KDDEEKIYKISDRLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNGYEL 369
KD+EE + + D VMG+ G+ + F+E + + + + N Y+L
Sbjct: 181 KDEEEDMEALLDTYVMGI----GEADAFSERLKQELVALEAANVYQL 223
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,241,022
Number of Sequences: 37544
Number of extensions: 278468
Number of successful extensions: 602
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 596
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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