Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12b13f
(619 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated p... 31 0.50
U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated p... 31 0.50
U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated p... 31 0.50
U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated p... 31 0.50
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 31 0.50
U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin pr... 31 0.50
U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin pr... 31 0.50
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 31 0.50
U28991-3|AAK68309.1| 298|Caenorhabditis elegans Hypothetical pr... 31 0.50
U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein. 31 0.50
U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein. 31 0.50
U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein. 31 0.50
Z83237-1|CAB05786.2| 423|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z19555-2|CAA79619.2| 394|Caenorhabditis elegans Hypothetical pr... 29 2.0
AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical ... 28 4.6
AF043704-2|AAX88816.1| 407|Caenorhabditis elegans Prion-like-(q... 28 4.6
Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical pr... 28 6.1
U61957-3|AAX55702.1| 395|Caenorhabditis elegans Temporarily ass... 28 6.1
U61957-2|AAX55703.1| 386|Caenorhabditis elegans Temporarily ass... 28 6.1
AL032639-3|CAA21635.1| 283|Caenorhabditis elegans Hypothetical ... 27 8.1
AC084156-3|AAK68489.1| 1334|Caenorhabditis elegans Hypothetical ... 27 8.1
>U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated
protein 44, isoform b protein.
Length = 905
Score = 31.5 bits (68), Expect = 0.50
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3
Query: 564 FLVSFVVDARGGAMKAKR 617
FL+SF+VDARGGAM+ R
Sbjct: 98 FLISFLVDARGGAMRGCR 115
>U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated
protein 44, isoform a protein.
Length = 2039
Score = 31.5 bits (68), Expect = 0.50
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3
Query: 564 FLVSFVVDARGGAMKAKR 617
FL+SF+VDARGGAM+ R
Sbjct: 1002 FLISFLVDARGGAMRGCR 1019
>U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated
protein 44, isoform e protein.
Length = 1841
Score = 31.5 bits (68), Expect = 0.50
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3
Query: 564 FLVSFVVDARGGAMKAKR 617
FL+SF+VDARGGAM+ R
Sbjct: 1002 FLISFLVDARGGAMRGCR 1019
>U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated
protein 44, isoform c protein.
Length = 1867
Score = 31.5 bits (68), Expect = 0.50
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3
Query: 564 FLVSFVVDARGGAMKAKR 617
FL+SF+VDARGGAM+ R
Sbjct: 1002 FLISFLVDARGGAMRGCR 1019
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 31.5 bits (68), Expect = 0.50
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3
Query: 564 FLVSFVVDARGGAMKAKR 617
FL+SF+VDARGGAM+ R
Sbjct: 1008 FLISFLVDARGGAMRGCR 1025
>U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin
protein.
Length = 1815
Score = 31.5 bits (68), Expect = 0.50
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3
Query: 564 FLVSFVVDARGGAMKAKR 617
FL+SF+VDARGGAM+ R
Sbjct: 1008 FLISFLVDARGGAMRGCR 1025
>U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin
protein.
Length = 1867
Score = 31.5 bits (68), Expect = 0.50
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3
Query: 564 FLVSFVVDARGGAMKAKR 617
FL+SF+VDARGGAM+ R
Sbjct: 1002 FLISFLVDARGGAMRGCR 1019
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 31.5 bits (68), Expect = 0.50
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3
Query: 564 FLVSFVVDARGGAMKAKR 617
FL+SF+VDARGGAM+ R
Sbjct: 1008 FLISFLVDARGGAMRGCR 1025
>U28991-3|AAK68309.1| 298|Caenorhabditis elegans Hypothetical
protein F08F8.6 protein.
Length = 298
Score = 31.5 bits (68), Expect = 0.50
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 435 MNSEVGTLH-RAKPLEDTVTDGHLWPSNNDKKVATMERQPV 554
M+ E G + R P +DT+ + PSN DKK + E++ V
Sbjct: 242 MSQEAGNIEPRKTPSKDTIGSTGVLPSNQDKKTPSKEKESV 282
>U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.
Length = 1786
Score = 31.5 bits (68), Expect = 0.50
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3
Query: 564 FLVSFVVDARGGAMKAKR 617
FL+SF+VDARGGAM+ R
Sbjct: 1008 FLISFLVDARGGAMRGCR 1025
>U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein.
Length = 970
Score = 31.5 bits (68), Expect = 0.50
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3
Query: 564 FLVSFVVDARGGAMKAKR 617
FL+SF+VDARGGAM+ R
Sbjct: 105 FLISFLVDARGGAMRGCR 122
>U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein.
Length = 985
Score = 31.5 bits (68), Expect = 0.50
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3
Query: 564 FLVSFVVDARGGAMKAKR 617
FL+SF+VDARGGAM+ R
Sbjct: 178 FLISFLVDARGGAMRGCR 195
>Z83237-1|CAB05786.2| 423|Caenorhabditis elegans Hypothetical
protein R06B9.1 protein.
Length = 423
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 367 MNVSCMSSGAATRYLPSRPPSSF 299
+NV C S G+ T +PS PP S+
Sbjct: 359 VNVPCPSGGSGTAVIPSAPPPSY 381
>Z19555-2|CAA79619.2| 394|Caenorhabditis elegans Hypothetical
protein F02A9.4b protein.
Length = 394
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/60 (21%), Positives = 30/60 (50%)
Frame = +3
Query: 327 YRVAAPELMQDTFMSDSEDEGGEVECPIQQQQQYRYMNSEVGTLHRAKPLEDTVTDGHLW 506
+R+ APE+ +D ++ +E +++ + +EVGT H A+ ++ + +W
Sbjct: 66 HRIGAPEISEDQYIKALTNESFFQRADVEENVESAQPGAEVGTEHNAELVKRGEQNLSIW 125
>AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical
protein Y39G8C.1 protein.
Length = 1195
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 276 SCLQCIKSNEDGGLEGKYRVAAPELMQDTF 365
S +QCI S E +G++R E+ QD+F
Sbjct: 661 SHIQCISSPEPPNSQGQWRTVRSEIPQDSF 690
>AF043704-2|AAX88816.1| 407|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 72
protein.
Length = 407
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +2
Query: 401 VSYSTATAVPLHEQRSRHAAPGETARGHGHRRTP 502
VS +T T V S P +R HGHRR P
Sbjct: 211 VSETTTTEVSTTASESTSLFPAFASRRHGHRRPP 244
>Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical
protein C33D9.8 protein.
Length = 604
Score = 27.9 bits (59), Expect = 6.1
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -2
Query: 273 LVFSFSLFLYRFSVSRLVFLCVSHCPFS 190
L+F+++LF Y F + + ++C+ P S
Sbjct: 194 LIFNYTLFSYFFGIKKTEYICIKMDPSS 221
>U61957-3|AAX55702.1| 395|Caenorhabditis elegans Temporarily
assigned gene nameprotein 49, isoform a protein.
Length = 395
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 420 QQYRYMNSEVGTL-HRAKPLEDTVTDGHLWPSNNDKKVATMERQPVDIGFLVS 575
++YR + ++G + R K L+D++ W S+ND + Q VDI ++S
Sbjct: 337 EEYRRLFRQIGCIWQRQKSLDDSMKPERRWNSSNDCQDQQEIDQIVDIPPVIS 389
>U61957-2|AAX55703.1| 386|Caenorhabditis elegans Temporarily
assigned gene nameprotein 49, isoform b protein.
Length = 386
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 420 QQYRYMNSEVGTL-HRAKPLEDTVTDGHLWPSNNDKKVATMERQPVDIGFLVS 575
++YR + ++G + R K L+D++ W S+ND + Q VDI ++S
Sbjct: 328 EEYRRLFRQIGCIWQRQKSLDDSMKPERRWNSSNDCQDQQEIDQIVDIPPVIS 380
>AL032639-3|CAA21635.1| 283|Caenorhabditis elegans Hypothetical
protein Y38F1A.2 protein.
Length = 283
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +3
Query: 474 LEDTVTDGH---LWPSNNDKKVATMERQPVDIGFLVSFVVDA 590
+ +TVT+ LWPS+ D ++AT + + F+V + DA
Sbjct: 25 VSETVTEPDEDWLWPSDPDVELATQITMAIAVIFIVKAIFDA 66
>AC084156-3|AAK68489.1| 1334|Caenorhabditis elegans Hypothetical
protein Y46E12BL.2 protein.
Length = 1334
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 294 KSNEDGGLEGKYRVAAPELMQDTFMSDSEDEGGE 395
+ +EDG +GK RV +D +SD +D+ E
Sbjct: 1211 EDDEDGPTKGKKRVKENSDSEDEILSDDDDDDDE 1244
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,987,603
Number of Sequences: 27780
Number of extensions: 212614
Number of successful extensions: 682
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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