Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12b10r
         (740 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    26   1.1  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    24   5.7  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   7.5  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   7.5  
AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450 pr...    23   9.9  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   9.9  
AF316636-1|AAG45164.1|  221|Anopheles gambiae glutathione S-tran...    23   9.9  

>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 503 SIVLFLVIPLLNILVLSHEMH 441
           S+VLFLV+P L +L L  + H
Sbjct: 5   SVVLFLVVPALTLLYLYLKQH 25


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 21  TTNVFYIVIMLDFLLATLNFMLPVRLYFF 107
           T   FYI+I    L  T+N +LP  L  F
Sbjct: 220 TDITFYIIIRRKTLFYTVNLILPTVLISF 248


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 285 FKSFEINTYVQIIYLDF 235
           F+SFE  T +  IY DF
Sbjct: 600 FRSFEAGTQLDAIYTDF 616


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 498  SFVSGHTTAKYTCVITRNAPKR 433
            SFV G TTA    +  RN P++
Sbjct: 2919 SFVDGFTTATVGVLFLRNLPRQ 2940


>AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450
           protein.
          Length = 492

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +1

Query: 199 NIRNCKINHNSFEIKINNLY 258
           NIR       SF I INNLY
Sbjct: 40  NIRTVAEKKESFGIAINNLY 59


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 10/47 (21%), Positives = 22/47 (46%)
 Frame = -3

Query: 543 HVSDKKKLSNRS*VNSFVSGHTTAKYTCVITRNAPKRHFVLNNKTYI 403
           H+ DK K+ ++   +  +  +    Y  +    +P+R  V+   TY+
Sbjct: 344 HLKDKNKIRHKKRWSQVMYMYYLLGYRIMQLNTSPERKMVIAQNTYL 390


>AF316636-1|AAG45164.1|  221|Anopheles gambiae glutathione
           S-transferase E2 protein.
          Length = 221

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 586 EPIDIYNVNAATHFEI*VLRSQYGYNDCRTL 678
           +P+    VN+A HFE  VL ++  +N  R L
Sbjct: 89  DPVKQARVNSALHFESGVLFARMRFNFERIL 119


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 748,459
Number of Sequences: 2352
Number of extensions: 15820
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)